RNA–Protein interactions for RNA: ENST00000637434.1

SPTAN1-235, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-235ENST00000637434 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
SPTAN1-235ENST00000637434 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
SPTAN1-235ENST00000637434 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.23
SPTAN1-235ENST00000637434 COL3A1P02461 1466 aaPredicted RBP16.45■□□□□ 0.22
SPTAN1-235ENST00000637434 DEFB132Q7Z7B7 95 aa16.45■□□□□ 0.22
SPTAN1-235ENST00000637434 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
SPTAN1-235ENST00000637434 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
SPTAN1-235ENST00000637434 SF3B2Q13435 895 aaKnown RBP16.42■□□□□ 0.22
SPTAN1-235ENST00000637434 KCNQ2O43526 872 aa16.42■□□□□ 0.22
SPTAN1-235ENST00000637434 RALBP1Q15311 655 aa16.42■□□□□ 0.22
SPTAN1-235ENST00000637434 LRP5O75197 1615 aa16.4■□□□□ 0.22
SPTAN1-235ENST00000637434 CYP27B1O15528 508 aa16.4■□□□□ 0.22
SPTAN1-235ENST00000637434 PRKRIP1Q9H875 184 aaPredicted RBP16.4■□□□□ 0.22
SPTAN1-235ENST00000637434 APBA3O96018 575 aa16.39■□□□□ 0.21
SPTAN1-235ENST00000637434 EN1Q05925 392 aaPredicted RBP16.39■□□□□ 0.21
SPTAN1-235ENST00000637434 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
SPTAN1-235ENST00000637434 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
SPTAN1-235ENST00000637434 MYBBP1AQ9BQG0 1328 aaKnown RBP16.39■□□□□ 0.21
SPTAN1-235ENST00000637434 PCDH11XQ9BZA7 1347 aa16.39■□□□□ 0.21
SPTAN1-235ENST00000637434 PCDH11YQ9BZA8 1340 aa16.39■□□□□ 0.21
SPTAN1-235ENST00000637434 SHANK3Q9BYB0 1731 aa16.38■□□□□ 0.21
SPTAN1-235ENST00000637434 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
SPTAN1-235ENST00000637434 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
SPTAN1-235ENST00000637434 SPG7Q9UQ90 795 aa16.38■□□□□ 0.21
SPTAN1-235ENST00000637434 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
SPTAN1-235ENST00000637434 KDRP35968 1356 aa16.36■□□□□ 0.21
SPTAN1-235ENST00000637434 BAG6P46379 1132 aa16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 PLEKHO1Q53GL0 409 aaPredicted RBP16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 CCDC125Q86Z20 511 aa16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 PHKG2P15735 406 aa16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 PRKAR2BP31323 418 aa16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 EZH2Q15910 746 aaKnown RBP16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 BCL11BQ9C0K0 894 aaPredicted RBP16.35■□□□□ 0.21
SPTAN1-235ENST00000637434 TNS1Q9HBL0 1735 aaKnown RBP16.34■□□□□ 0.21
SPTAN1-235ENST00000637434 PKD1L3Q7Z443 1732 aa16.34■□□□□ 0.21
SPTAN1-235ENST00000637434 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
SPTAN1-235ENST00000637434 BCL9O00512 1426 aa16.33■□□□□ 0.2
SPTAN1-235ENST00000637434 ANP32CO43423 234 aa16.32■□□□□ 0.2
SPTAN1-235ENST00000637434 MTHFSDQ2M296 383 aaKnown RBP16.32■□□□□ 0.2
SPTAN1-235ENST00000637434 CCDC184Q52MB2 194 aa16.32■□□□□ 0.2
SPTAN1-235ENST00000637434 RSPH6AQ9H0K4 717 aa16.32■□□□□ 0.2
SPTAN1-235ENST00000637434 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.27e-7■■□□□ 12.4
SPTAN1-235ENST00000637434 DOT1LQ8TEK3 1739 aa16.32■□□□□ 0.2
SPTAN1-235ENST00000637434 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
SPTAN1-235ENST00000637434 MPRIPQ6WCQ1 1025 aa16.31■□□□□ 0.2
SPTAN1-235ENST00000637434 SBF2Q86WG5 1849 aa16.31■□□□□ 0.2
SPTAN1-235ENST00000637434 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
SPTAN1-235ENST00000637434 C1orf141Q5JVX7 400 aa16.3■□□□□ 0.2
SPTAN1-235ENST00000637434 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
SPTAN1-235ENST00000637434 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
SPTAN1-235ENST00000637434 KAT6BQ8WYB5 2073 aa16.3■□□□□ 0.2
SPTAN1-235ENST00000637434 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
SPTAN1-235ENST00000637434 KCNQ4P56696 695 aa16.29■□□□□ 0.2
SPTAN1-235ENST00000637434 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
SPTAN1-235ENST00000637434 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
SPTAN1-235ENST00000637434 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.19
SPTAN1-235ENST00000637434 FCHSD2O94868 740 aa16.26■□□□□ 0.19
SPTAN1-235ENST00000637434 PIGBQ92521 554 aa16.26■□□□□ 0.19
SPTAN1-235ENST00000637434 LGR6Q9HBX8 967 aa16.26■□□□□ 0.19
SPTAN1-235ENST00000637434 BTAF1O14981 1849 aa16.25■□□□□ 0.19
SPTAN1-235ENST00000637434 WDR43Q15061 677 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■□□□□ 9.3
SPTAN1-235ENST00000637434 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
SPTAN1-235ENST00000637434 PROM2Q8N271 834 aa16.25■□□□□ 0.19
SPTAN1-235ENST00000637434 DCAF5Q96JK2 942 aa16.25■□□□□ 0.19
SPTAN1-235ENST00000637434 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
SPTAN1-235ENST00000637434 TXNRD1Q16881 649 aa16.24■□□□□ 0.19
SPTAN1-235ENST00000637434 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
SPTAN1-235ENST00000637434 PSDA5PKW4 1024 aaPredicted RBP16.23■□□□□ 0.19
SPTAN1-235ENST00000637434 PLSCR1O15162 318 aa16.23■□□□□ 0.19
SPTAN1-235ENST00000637434 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
SPTAN1-235ENST00000637434 CABP4P57796 275 aa16.23■□□□□ 0.19
SPTAN1-235ENST00000637434 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
SPTAN1-235ENST00000637434 PLEKHG2Q9H7P9 1386 aa16.23■□□□□ 0.19
SPTAN1-235ENST00000637434 RNMTO43148 476 aaKnown RBP16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 NFATC2IPQ8NCF5 419 aa16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
SPTAN1-235ENST00000637434 MAPK8IP3Q9UPT6 1336 aa16.21■□□□□ 0.19
SPTAN1-235ENST00000637434 MCM10Q7L590 875 aa16.21■□□□□ 0.19
SPTAN1-235ENST00000637434 LRRC4BQ9NT99 713 aa16.21■□□□□ 0.19
SPTAN1-235ENST00000637434 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
SPTAN1-235ENST00000637434 GNAT3A8MTJ3 354 aa16.2■□□□□ 0.18
SPTAN1-235ENST00000637434 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
SPTAN1-235ENST00000637434 NEFMP07197 916 aa16.2■□□□□ 0.18
SPTAN1-235ENST00000637434 R3HDM1Q15032 1099 aaKnown RBP16.19■□□□□ 0.18
SPTAN1-235ENST00000637434 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
SPTAN1-235ENST00000637434 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
SPTAN1-235ENST00000637434 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
SPTAN1-235ENST00000637434 CCNL1Q9UK58 526 aaPredicted RBP16.19■□□□□ 0.18
SPTAN1-235ENST00000637434 ITGB4P16144 1822 aa16.18■□□□□ 0.18
SPTAN1-235ENST00000637434 SLC39A6Q13433 755 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms