RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PRIM1P49642 420 aaKnown RBP17.52■□□□□ 0.4
CTSD-208ENST00000636843 RRS1Q15050 365 aaKnown RBP17.52■□□□□ 0.4
CTSD-208ENST00000636843 GGNBP2Q9H3C7 697 aa17.52■□□□□ 0.4
CTSD-208ENST00000636843 AKT1S1Q96B36 256 aa17.52■□□□□ 0.39
CTSD-208ENST00000636843 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.39
CTSD-208ENST00000636843 ARXQ96QS3 562 aa17.52■□□□□ 0.39
CTSD-208ENST00000636843 CGNL1Q0VF96 1302 aa17.51■□□□□ 0.39
CTSD-208ENST00000636843 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
CTSD-208ENST00000636843 NBPF6Q5VWK0 638 aa17.5■□□□□ 0.39
CTSD-208ENST00000636843 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
CTSD-208ENST00000636843 NBPF4Q96M43 638 aa17.5■□□□□ 0.39
CTSD-208ENST00000636843 SMG6Q86US8 1419 aaKnown RBP17.5■□□□□ 0.39
CTSD-208ENST00000636843 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
CTSD-208ENST00000636843 MEGF6O75095 1541 aa17.49■□□□□ 0.39
CTSD-208ENST00000636843 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
CTSD-208ENST00000636843 TIMELESSQ9UNS1 1208 aa17.48■□□□□ 0.39
CTSD-208ENST00000636843 NSD2O96028 1365 aa17.47■□□□□ 0.39
CTSD-208ENST00000636843 INSRP06213 1382 aa17.47■□□□□ 0.39
CTSD-208ENST00000636843 KIF24Q5T7B8 1368 aa17.47■□□□□ 0.39
CTSD-208ENST00000636843 TFCP2L1Q9NZI6 479 aa17.47■□□□□ 0.39
CTSD-208ENST00000636843 TATP17735 454 aaPredicted RBP17.47■□□□□ 0.39
CTSD-208ENST00000636843 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.39
CTSD-208ENST00000636843 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
CTSD-208ENST00000636843 FLT4P35916 1363 aa17.45■□□□□ 0.38
CTSD-208ENST00000636843 POLD1P28340 1107 aa17.45■□□□□ 0.38
CTSD-208ENST00000636843 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
CTSD-208ENST00000636843 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
CTSD-208ENST00000636843 KCNQ4P56696 695 aa17.44■□□□□ 0.38
CTSD-208ENST00000636843 CCNL1Q9UK58 526 aaPredicted RBP17.44■□□□□ 0.38
CTSD-208ENST00000636843 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
CTSD-208ENST00000636843 CARD14Q9BXL6 1004 aa17.43■□□□□ 0.38
CTSD-208ENST00000636843 DOT1LQ8TEK3 1739 aa17.43■□□□□ 0.38
CTSD-208ENST00000636843 SHANK3Q9BYB0 1731 aa17.43■□□□□ 0.38
CTSD-208ENST00000636843 PCDH11XQ9BZA7 1347 aa17.43■□□□□ 0.38
CTSD-208ENST00000636843 PCDH11YQ9BZA8 1340 aa17.43■□□□□ 0.38
CTSD-208ENST00000636843 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
CTSD-208ENST00000636843 LY75O60449 1722 aa17.4■□□□□ 0.38
CTSD-208ENST00000636843 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
CTSD-208ENST00000636843 EMILIN1Q9Y6C2 1016 aa17.4■□□□□ 0.38
CTSD-208ENST00000636843 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.38
CTSD-208ENST00000636843 ZNF784Q8NCA9 323 aaPredicted RBP17.39■□□□□ 0.37
CTSD-208ENST00000636843 GPR162Q16538 588 aa17.38■□□□□ 0.37
CTSD-208ENST00000636843 CYP27B1O15528 508 aa17.37■□□□□ 0.37
CTSD-208ENST00000636843 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
CTSD-208ENST00000636843 MSH5O43196 834 aa17.37■□□□□ 0.37
CTSD-208ENST00000636843 COL23A1Q86Y22 540 aaPredicted RBP17.37■□□□□ 0.37
CTSD-208ENST00000636843 COL24A1Q17RW2 1714 aa17.36■□□□□ 0.37
CTSD-208ENST00000636843 WASHC2AQ641Q2 1341 aa17.36■□□□□ 0.37
CTSD-208ENST00000636843 PPM1GO15355 546 aaPredicted RBP17.36■□□□□ 0.37
CTSD-208ENST00000636843 MPRIPQ6WCQ1 1025 aa17.36■□□□□ 0.37
CTSD-208ENST00000636843 SMARCC1Q92922 1105 aaPredicted RBP17.36■□□□□ 0.37
CTSD-208ENST00000636843 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
CTSD-208ENST00000636843 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
CTSD-208ENST00000636843 FLAD1Q8NFF5 587 aa17.35■□□□□ 0.37
CTSD-208ENST00000636843 SPG7Q9UQ90 795 aa17.35■□□□□ 0.37
CTSD-208ENST00000636843 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
CTSD-208ENST00000636843 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
CTSD-208ENST00000636843 UTRNP46939 3433 aa17.34■□□□□ 0.37
CTSD-208ENST00000636843 CHD4Q14839 1912 aa17.33■□□□□ 0.37
CTSD-208ENST00000636843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.37
CTSD-208ENST00000636843 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
CTSD-208ENST00000636843 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
CTSD-208ENST00000636843 EYA1Q99502 592 aa17.31■□□□□ 0.36
CTSD-208ENST00000636843 POLKQ9UBT6 870 aa17.31■□□□□ 0.36
CTSD-208ENST00000636843 PIGBQ92521 554 aa17.31■□□□□ 0.36
CTSD-208ENST00000636843 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
CTSD-208ENST00000636843 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
CTSD-208ENST00000636843 ANKRD26Q9UPS8 1709 aa17.29■□□□□ 0.36
CTSD-208ENST00000636843 GRIN3BO60391 1043 aa17.29■□□□□ 0.36
CTSD-208ENST00000636843 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
CTSD-208ENST00000636843 AK7Q96M32 723 aa17.29■□□□□ 0.36
CTSD-208ENST00000636843 C5P01031 1676 aa17.28■□□□□ 0.36
CTSD-208ENST00000636843 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
CTSD-208ENST00000636843 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
CTSD-208ENST00000636843 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.36
CTSD-208ENST00000636843 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.35
CTSD-208ENST00000636843 LOC102724428A0A0B4J2F2 783 aa17.26■□□□□ 0.35
CTSD-208ENST00000636843 SIK1P57059 783 aa17.26■□□□□ 0.35
CTSD-208ENST00000636843 EIF4G2P78344 907 aaKnown RBP eCLIP17.26■□□□□ 0.35
CTSD-208ENST00000636843 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
CTSD-208ENST00000636843 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
CTSD-208ENST00000636843 TOGARAM1Q9Y4F4 1720 aa17.26■□□□□ 0.35
CTSD-208ENST00000636843 PHKG2P15735 406 aa17.26■□□□□ 0.35
CTSD-208ENST00000636843 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
CTSD-208ENST00000636843 ITGB4P16144 1822 aa17.25■□□□□ 0.35
CTSD-208ENST00000636843 TAF1LQ8IZX4 1826 aa17.25■□□□□ 0.35
CTSD-208ENST00000636843 SSFA2P28290 1259 aa17.25■□□□□ 0.35
CTSD-208ENST00000636843 C4BP0C0L5 1744 aa17.25■□□□□ 0.35
CTSD-208ENST00000636843 YBX3P16989 372 aaKnown RBP eCLIP17.24■□□□□ 0.351e-6■■□□□ 11.5
CTSD-208ENST00000636843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.23■□□□□ 0.35
CTSD-208ENST00000636843 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
CTSD-208ENST00000636843 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
CTSD-208ENST00000636843 PANK3Q9H999 370 aa17.23■□□□□ 0.35
CTSD-208ENST00000636843 ASAP1Q9ULH1 1129 aa17.23■□□□□ 0.35
CTSD-208ENST00000636843 IGSF1Q8N6C5 1336 aa17.22■□□□□ 0.35
CTSD-208ENST00000636843 PHF14O94880 888 aa17.22■□□□□ 0.35
CTSD-208ENST00000636843 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
CTSD-208ENST00000636843 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
CTSD-208ENST00000636843 ERVV-2B6SEH9 535 aa17.21■□□□□ 0.34
CTSD-208ENST00000636843 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms