RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 RAB3GAP1Q15042 981 aa13.98□□□□□ -0.17
VARS2-213ENST00000625423 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
VARS2-213ENST00000625423 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
VARS2-213ENST00000625423 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
VARS2-213ENST00000625423 TNRQ92752 1358 aa13.97□□□□□ -0.17
VARS2-213ENST00000625423 TMEM2Q9UHN6 1383 aa13.97□□□□□ -0.17
VARS2-213ENST00000625423 ITSN1Q15811 1721 aa13.97□□□□□ -0.17
VARS2-213ENST00000625423 CEP85Q6P2H3 762 aa13.97□□□□□ -0.17
VARS2-213ENST00000625423 ATP10DQ9P241 1426 aa13.97□□□□□ -0.17
VARS2-213ENST00000625423 APBB1O00213 710 aa13.97□□□□□ -0.17
VARS2-213ENST00000625423 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
VARS2-213ENST00000625423 NRKQ7Z2Y5 1582 aa13.96□□□□□ -0.17
VARS2-213ENST00000625423 MSH6P52701 1360 aa13.96□□□□□ -0.17
VARS2-213ENST00000625423 RPAP2Q8IXW5 612 aaPredicted RBP13.96□□□□□ -0.17
VARS2-213ENST00000625423 GBP4Q96PP9 640 aa13.96□□□□□ -0.17
VARS2-213ENST00000625423 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.17
VARS2-213ENST00000625423 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.17
VARS2-213ENST00000625423 SMARCA5O60264 1052 aaPredicted RBP13.96□□□□□ -0.17
VARS2-213ENST00000625423 GAS2L2Q8NHY3 880 aa13.96□□□□□ -0.17
VARS2-213ENST00000625423 MEIS3Q99687 375 aa13.96□□□□□ -0.17
VARS2-213ENST00000625423 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.18
VARS2-213ENST00000625423 RRAGDQ9NQL2 400 aaPredicted RBP13.96□□□□□ -0.18
VARS2-213ENST00000625423 KIAA0232Q92628 1395 aa13.95□□□□□ -0.18
VARS2-213ENST00000625423 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
VARS2-213ENST00000625423 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
VARS2-213ENST00000625423 FOXO3O43524 673 aa13.95□□□□□ -0.18
VARS2-213ENST00000625423 ADAMTS13Q76LX8 1427 aa13.95□□□□□ -0.18
VARS2-213ENST00000625423 PTPRCP08575 1304 aa13.94□□□□□ -0.18
VARS2-213ENST00000625423 USP6P35125 1406 aa13.94□□□□□ -0.18
VARS2-213ENST00000625423 MRE11P49959 708 aa13.94□□□□□ -0.18
VARS2-213ENST00000625423 LTKP29376 864 aa13.94□□□□□ -0.18
VARS2-213ENST00000625423 CRB1P82279 1406 aa13.93□□□□□ -0.18
VARS2-213ENST00000625423 SDSP20132 328 aa13.93□□□□□ -0.18
VARS2-213ENST00000625423 SSFA2P28290 1259 aa13.93□□□□□ -0.18
VARS2-213ENST00000625423 USP26Q9BXU7 913 aa13.93□□□□□ -0.18
VARS2-213ENST00000625423 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
VARS2-213ENST00000625423 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
VARS2-213ENST00000625423 MTHFSDQ2M296 383 aaKnown RBP13.92□□□□□ -0.18
VARS2-213ENST00000625423 SLC26A8Q96RN1 970 aa13.92□□□□□ -0.18
VARS2-213ENST00000625423 SLC4A10Q6U841 1118 aa13.92□□□□□ -0.18
VARS2-213ENST00000625423 GRPEL1Q9HAV7 217 aa13.92□□□□□ -0.18
VARS2-213ENST00000625423 PEAK1Q9H792 1746 aa13.92□□□□□ -0.18
VARS2-213ENST00000625423 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
VARS2-213ENST00000625423 RABEP1Q15276 862 aa13.92□□□□□ -0.18
VARS2-213ENST00000625423 G2E3Q7L622 706 aa13.92□□□□□ -0.18
VARS2-213ENST00000625423 TSPYL4Q9UJ04 414 aa13.92□□□□□ -0.18
VARS2-213ENST00000625423 F6X3S4 739 aa13.91□□□□□ -0.18
VARS2-213ENST00000625423 RTF1Q92541 710 aaKnown RBP13.91□□□□□ -0.18
VARS2-213ENST00000625423 SKOR2Q2VWA4 1001 aaPredicted RBP13.9□□□□□ -0.18
VARS2-213ENST00000625423 GAS2L3Q86XJ1 694 aa13.89□□□□□ -0.19
VARS2-213ENST00000625423 ARHGEF10O15013 1369 aa13.89□□□□□ -0.19
VARS2-213ENST00000625423 UBR1Q8IWV7 1749 aa13.89□□□□□ -0.19
VARS2-213ENST00000625423 PLEKHG1Q9ULL1 1385 aa13.89□□□□□ -0.19
VARS2-213ENST00000625423 CASC1Q6TDU7 716 aa13.89□□□□□ -0.19
VARS2-213ENST00000625423 SSH2Q76I76 1423 aa13.89□□□□□ -0.19
VARS2-213ENST00000625423 PTPRUQ92729 1446 aa13.89□□□□□ -0.19
VARS2-213ENST00000625423 TOPAZ1Q8N9V7 1692 aa13.88□□□□□ -0.19
VARS2-213ENST00000625423 HMMRO75330 724 aa13.88□□□□□ -0.19
VARS2-213ENST00000625423 PTMSP20962 102 aa13.88□□□□□ -0.19
VARS2-213ENST00000625423 ISY1Q9ULR0 285 aaKnown RBP13.88□□□□□ -0.19
VARS2-213ENST00000625423 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
VARS2-213ENST00000625423 EYA1Q99502 592 aa13.88□□□□□ -0.19
VARS2-213ENST00000625423 AMPHP49418 695 aa13.87□□□□□ -0.19
VARS2-213ENST00000625423 NGDNQ8NEJ9 315 aaKnown RBP13.87□□□□□ -0.19
VARS2-213ENST00000625423 AMOTL2Q9Y2J4 779 aa13.87□□□□□ -0.19
VARS2-213ENST00000625423 FLT4P35916 1363 aa13.87□□□□□ -0.19
VARS2-213ENST00000625423 TTC21AQ8NDW8 1320 aa13.87□□□□□ -0.19
VARS2-213ENST00000625423 BAG4O95429 457 aaKnown RBP13.87□□□□□ -0.19
VARS2-213ENST00000625423 CCT4P50991 539 aaKnown RBP13.87□□□□□ -0.19
VARS2-213ENST00000625423 SBNO1A3KN83 1393 aa13.87□□□□□ -0.19
VARS2-213ENST00000625423 GOLGA6L22H0YM25 854 aa13.86□□□□□ -0.19
VARS2-213ENST00000625423 NALCNQ8IZF0 1738 aa13.86□□□□□ -0.19
VARS2-213ENST00000625423 PRKCSHP14314 528 aaPredicted RBP13.86□□□□□ -0.19
VARS2-213ENST00000625423 CLEC17AQ6ZS10 378 aa13.86□□□□□ -0.19
VARS2-213ENST00000625423 PDE1AP54750 535 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 EXOC6BQ9Y2D4 811 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 REC8O95072 547 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 STK31Q9BXU1 1019 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
VARS2-213ENST00000625423 KDRP35968 1356 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 GNAI2P04899 355 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 TSHZ3Q63HK5 1081 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 EID1Q9Y6B2 187 aa13.85□□□□□ -0.19
VARS2-213ENST00000625423 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
VARS2-213ENST00000625423 ERC2O15083 957 aa13.84□□□□□ -0.19
VARS2-213ENST00000625423 PKP1Q13835 747 aa13.84□□□□□ -0.19
VARS2-213ENST00000625423 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
VARS2-213ENST00000625423 CEP170BQ9Y4F5 1589 aaPredicted RBP13.84□□□□□ -0.19
VARS2-213ENST00000625423 ST18O60284 1047 aa13.84□□□□□ -0.19
VARS2-213ENST00000625423 OSBPL3Q9H4L5 887 aa13.84□□□□□ -0.19
VARS2-213ENST00000625423 NUCB2P80303 420 aa13.83□□□□□ -0.2
VARS2-213ENST00000625423 FLIIQ13045 1269 aa13.83□□□□□ -0.2
VARS2-213ENST00000625423 FKBP5Q13451 457 aaPredicted RBP13.83□□□□□ -0.2
VARS2-213ENST00000625423 MCTP1Q6DN14 999 aa13.83□□□□□ -0.2
VARS2-213ENST00000625423 ZGPATQ8N5A5 531 aaKnown RBP13.83□□□□□ -0.2
VARS2-213ENST00000625423 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
VARS2-213ENST00000625423 NLRP6P59044 892 aa13.83□□□□□ -0.2
VARS2-213ENST00000625423 KLHL40Q2TBA0 621 aa13.82□□□□□ -0.2
VARS2-213ENST00000625423 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms