RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SIRT2Q8IXJ6 389 aa10.44□□□□□ -0.74
SND1-IT1-201ENST00000623342 KCNA6P17658 529 aa10.43□□□□□ -0.74
SND1-IT1-201ENST00000623342 TBC1D2Q9BYX2 928 aa10.43□□□□□ -0.74
SND1-IT1-201ENST00000623342 MTHFSDQ2M296 383 aaKnown RBP10.43□□□□□ -0.74
SND1-IT1-201ENST00000623342 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
SND1-IT1-201ENST00000623342 BMP2KLQ5H9B9 411 aa10.43□□□□□ -0.74
SND1-IT1-201ENST00000623342 RTF1Q92541 710 aaKnown RBP10.43□□□□□ -0.74
SND1-IT1-201ENST00000623342 CEP170BQ9Y4F5 1589 aaPredicted RBP10.43□□□□□ -0.74
SND1-IT1-201ENST00000623342 PTPRCP08575 1304 aa10.42□□□□□ -0.74
SND1-IT1-201ENST00000623342 IGSF1Q8N6C5 1336 aa10.42□□□□□ -0.74
SND1-IT1-201ENST00000623342 NLRP6P59044 892 aa10.42□□□□□ -0.74
SND1-IT1-201ENST00000623342 EYA1Q99502 592 aa10.42□□□□□ -0.74
SND1-IT1-201ENST00000623342 RGS12O14924 1447 aa10.42□□□□□ -0.74
SND1-IT1-201ENST00000623342 FRAT2O75474 233 aaPredicted RBP10.42□□□□□ -0.74
SND1-IT1-201ENST00000623342 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
SND1-IT1-201ENST00000623342 FOXO3O43524 673 aa10.41□□□□□ -0.74
SND1-IT1-201ENST00000623342 ADAMTSL3P82987 1691 aa10.41□□□□□ -0.74
SND1-IT1-201ENST00000623342 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
SND1-IT1-201ENST00000623342 SLKQ9H2G2 1235 aaPredicted RBP10.41□□□□□ -0.74
SND1-IT1-201ENST00000623342 HTATSF1O43719 755 aaKnown RBP10.4□□□□□ -0.74
SND1-IT1-201ENST00000623342 GSE1Q14687 1217 aa10.4□□□□□ -0.74
SND1-IT1-201ENST00000623342 ANTXR1Q9H6X2 564 aa10.4□□□□□ -0.74
SND1-IT1-201ENST00000623342 TSPYL4Q9UJ04 414 aa10.4□□□□□ -0.74
SND1-IT1-201ENST00000623342 DCTPP1Q9H773 170 aa10.4□□□□□ -0.75
SND1-IT1-201ENST00000623342 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.75
SND1-IT1-201ENST00000623342 MARF1Q9Y4F3 1742 aaKnown RBP10.39□□□□□ -0.75
SND1-IT1-201ENST00000623342 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
SND1-IT1-201ENST00000623342 HOXC9P31274 260 aa10.39□□□□□ -0.75
SND1-IT1-201ENST00000623342 RBM25P49756 843 aaKnown RBP10.39□□□□□ -0.75
SND1-IT1-201ENST00000623342 RPAP2Q8IXW5 612 aaPredicted RBP10.39□□□□□ -0.75
SND1-IT1-201ENST00000623342 ANKRD44Q8N8A2 993 aa10.39□□□□□ -0.75
SND1-IT1-201ENST00000623342 ABTB2Q8N961 1025 aa10.39□□□□□ -0.75
SND1-IT1-201ENST00000623342 NUTM2GQ5VZR2 741 aa10.38□□□□□ -0.75
SND1-IT1-201ENST00000623342 MSH6P52701 1360 aa10.38□□□□□ -0.75
SND1-IT1-201ENST00000623342 ATP10DQ9P241 1426 aa10.38□□□□□ -0.75
SND1-IT1-201ENST00000623342 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
SND1-IT1-201ENST00000623342 ANKLE2Q86XL3 938 aa10.38□□□□□ -0.75
SND1-IT1-201ENST00000623342 CHD2O14647 1828 aaKnown RBP10.37□□□□□ -0.75
SND1-IT1-201ENST00000623342 NWD1Q149M9 1564 aa10.37□□□□□ -0.75
SND1-IT1-201ENST00000623342 RTL1A6NKG5 1358 aa10.37□□□□□ -0.75
SND1-IT1-201ENST00000623342 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
SND1-IT1-201ENST00000623342 CEP85Q6P2H3 762 aa10.37□□□□□ -0.75
SND1-IT1-201ENST00000623342 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
SND1-IT1-201ENST00000623342 ADRA2BP18089 450 aa10.36□□□□□ -0.75
SND1-IT1-201ENST00000623342 TBC1D9Q6ZT07 1266 aa10.36□□□□□ -0.75
SND1-IT1-201ENST00000623342 HSCBQ8IWL3 235 aa10.36□□□□□ -0.75
SND1-IT1-201ENST00000623342 SETD1BQ9UPS6 1966 aaKnown RBP10.36□□□□□ -0.75
SND1-IT1-201ENST00000623342 CCT4P50991 539 aaKnown RBP10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 MEIS3Q99687 375 aa10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 ZNF142P52746 1687 aaPredicted RBP10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 MAP3K5Q99683 1374 aa10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 EIF5BO60841 1220 aaKnown RBP10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 CDC45O75419 566 aa10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 G2E3Q7L622 706 aa10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 SNX21Q969T3 373 aa10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 STK31Q9BXU1 1019 aa10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
SND1-IT1-201ENST00000623342 LTV1Q96GA3 475 aaPredicted RBP10.34□□□□□ -0.75
SND1-IT1-201ENST00000623342 BABAM1Q9NWV8 329 aa10.34□□□□□ -0.75
SND1-IT1-201ENST00000623342 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
SND1-IT1-201ENST00000623342 GSPT1P15170 499 aaKnown RBP10.34□□□□□ -0.75
SND1-IT1-201ENST00000623342 CCDC30Q5VVM6 783 aa10.34□□□□□ -0.75
SND1-IT1-201ENST00000623342 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
SND1-IT1-201ENST00000623342 HMMRO75330 724 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 TTC22Q5TAA0 569 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 SLC4A10Q6U841 1118 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 IL17REQ8NFR9 667 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 CHMP5Q9NZZ3 219 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 LTN1O94822 1766 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 ADGRL3Q9HAR2 1447 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 F6X3S4 739 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 TAF7Q15545 349 aaPredicted RBP10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 IP6K1Q92551 441 aa10.33□□□□□ -0.76
SND1-IT1-201ENST00000623342 FAM208AQ9UK61 1670 aaKnown RBP10.32□□□□□ -0.76
SND1-IT1-201ENST00000623342 C16orf71Q8IYS4 520 aaPredicted RBP10.32□□□□□ -0.76
SND1-IT1-201ENST00000623342 NCOA3Q9Y6Q9 1424 aa10.32□□□□□ -0.76
SND1-IT1-201ENST00000623342 NFAT5O94916 1531 aa10.32□□□□□ -0.76
SND1-IT1-201ENST00000623342 PSME1Q06323 249 aa10.32□□□□□ -0.76
SND1-IT1-201ENST00000623342 FLIIQ13045 1269 aa10.32□□□□□ -0.76
SND1-IT1-201ENST00000623342 KIF2CQ99661 725 aa10.32□□□□□ -0.76
SND1-IT1-201ENST00000623342 HSPA2P54652 639 aa10.31□□□□□ -0.76
SND1-IT1-201ENST00000623342 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
SND1-IT1-201ENST00000623342 GNAI2P04899 355 aa10.31□□□□□ -0.76
SND1-IT1-201ENST00000623342 FKBP5Q13451 457 aaPredicted RBP10.31□□□□□ -0.76
SND1-IT1-201ENST00000623342 USHBP1Q8N6Y0 703 aa10.31□□□□□ -0.76
SND1-IT1-201ENST00000623342 KCNH5Q8NCM2 988 aa10.31□□□□□ -0.76
SND1-IT1-201ENST00000623342 XPCQ01831 940 aaPredicted RBP10.3□□□□□ -0.76
SND1-IT1-201ENST00000623342 SMARCA5O60264 1052 aaPredicted RBP10.3□□□□□ -0.76
SND1-IT1-201ENST00000623342 GNAI3P08754 354 aa10.3□□□□□ -0.76
SND1-IT1-201ENST00000623342 OTUD7AQ8TE49 926 aaPredicted RBP10.3□□□□□ -0.76
SND1-IT1-201ENST00000623342 CACNA1FO60840 1977 aa10.3□□□□□ -0.76
SND1-IT1-201ENST00000623342 APBB1O00213 710 aa10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 HSP90AB1P08238 724 aaKnown RBP10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 NBPF6Q5VWK0 638 aa10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 NECTIN2Q92692 538 aa10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 NBPF4Q96M43 638 aa10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 PHRF1Q9P1Y6 1649 aaKnown RBP10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms