RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 MICALL1Q8N3F8 863 aa15.45■□□□□ 0.06
COL1A2-213ENST00000620463 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 C17orf53Q8N3J3 647 aaPredicted RBP15.44■□□□□ 0.06
COL1A2-213ENST00000620463 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
COL1A2-213ENST00000620463 HSP90AB4PQ58FF6 505 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 BCL2L12Q9HB09 334 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 C9orf78Q9NZ63 289 aaPredicted RBP15.44■□□□□ 0.06
COL1A2-213ENST00000620463 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 CASQ1P31415 396 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 MAP3K1Q13233 1512 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 KIF4BQ2VIQ3 1234 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 CFAP45Q9UL16 551 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
COL1A2-213ENST00000620463 CCDC91Q7Z6B0 441 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 PIBF1Q8WXW3 757 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 UBE2HP62256 183 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 CERS3Q8IU89 383 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 SKILP12757 684 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 NF2P35240 595 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 GSDMDP57764 484 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 KRBA2Q6ZNG9 492 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 CCDC83Q8IWF9 413 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 ZSWIM4Q9H7M6 989 aa15.43■□□□□ 0.06
COL1A2-213ENST00000620463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL1A2-213ENST00000620463 MCM6Q14566 821 aa15.42■□□□□ 0.06
COL1A2-213ENST00000620463 TWISTNBQ3B726 338 aaPredicted RBP15.42■□□□□ 0.06
COL1A2-213ENST00000620463 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
COL1A2-213ENST00000620463 ZNF500O60304 480 aaPredicted RBP15.42■□□□□ 0.06
COL1A2-213ENST00000620463 SCAND2PQ9GZW5 306 aaPredicted RBP15.42■□□□□ 0.06
COL1A2-213ENST00000620463 ANO10Q9NW15 660 aa15.42■□□□□ 0.06
COL1A2-213ENST00000620463 DRC1Q96MC2 740 aa15.42■□□□□ 0.06
COL1A2-213ENST00000620463 ODF2Q5BJF6 829 aa15.42■□□□□ 0.06
COL1A2-213ENST00000620463 ZSCAN31Q96LW9 406 aaPredicted RBP15.42■□□□□ 0.06
COL1A2-213ENST00000620463 MAP9Q49MG5 647 aa15.41■□□□□ 0.06
COL1A2-213ENST00000620463 JAKMIP1Q96N16 626 aaKnown RBP15.41■□□□□ 0.06
COL1A2-213ENST00000620463 PTGS1P23219 599 aa15.41■□□□□ 0.06
COL1A2-213ENST00000620463 PDRG1Q9NUG6 133 aa15.41■□□□□ 0.06
COL1A2-213ENST00000620463 UBTFL1P0CB47 393 aaPredicted RBP15.41■□□□□ 0.06
COL1A2-213ENST00000620463 SAFBQ15424 915 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL1A2-213ENST00000620463 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
COL1A2-213ENST00000620463 FSD2A1L4K1 749 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 G3BP1Q13283 466 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL1A2-213ENST00000620463 CCDC181Q5TID7 509 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 CLASRPQ8N2M8 674 aaKnown RBP15.4■□□□□ 0.06
COL1A2-213ENST00000620463 PPP1R9BQ96SB3 815 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 GGNBP2Q9H3C7 697 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 CCDC47Q96A33 483 aaKnown RBP15.4■□□□□ 0.06
COL1A2-213ENST00000620463 FSD1Q9BTV5 496 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 EID1Q9Y6B2 187 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 GNAI3P08754 354 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 EIF2S2P20042 333 aaKnown RBP15.4■□□□□ 0.06
COL1A2-213ENST00000620463 FAM200AQ8TCP9 573 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
COL1A2-213ENST00000620463 DDX19AQ9NUU7 478 aaKnown RBP15.4■□□□□ 0.06
COL1A2-213ENST00000620463 CLGNO14967 610 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 MX1P20591 662 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 TRDNQ13061 729 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 TMC6Q7Z403 805 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 DNAI1Q9UI46 699 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 PLEKHH1Q9ULM0 1364 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 EPB41L2O43491 1005 aaKnown RBP15.39■□□□□ 0.05
COL1A2-213ENST00000620463 ANKRD1Q15327 319 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 MICALCLQ6ZW33 695 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 INCENPQ9NQS7 918 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 MAP4K4O95819 1239 aaPredicted RBP15.39■□□□□ 0.05
COL1A2-213ENST00000620463 ZNF445P59923 1031 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 GAS2L3Q86XJ1 694 aa15.39■□□□□ 0.05
COL1A2-213ENST00000620463 NGDNQ8NEJ9 315 aaKnown RBP15.39■□□□□ 0.05
COL1A2-213ENST00000620463 ATP2B1P20020 1258 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 KIF5CO60282 957 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 BLOC1S2Q6QNY1 142 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 USP48Q86UV5 1035 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 DHX29Q7Z478 1369 aaKnown RBP15.38■□□□□ 0.05
COL1A2-213ENST00000620463 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 CASTP20810 708 aaKnown RBP15.38■□□□□ 0.05
COL1A2-213ENST00000620463 GNG11P61952 73 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 SLC26A8Q96RN1 970 aa15.38■□□□□ 0.05
COL1A2-213ENST00000620463 TOP1P11387 765 aaKnown RBP15.37■□□□□ 0.05
COL1A2-213ENST00000620463 GBP2P32456 591 aaPredicted RBP15.37■□□□□ 0.05
COL1A2-213ENST00000620463 AMPHP49418 695 aa15.37■□□□□ 0.05
COL1A2-213ENST00000620463 STX6O43752 255 aa15.37■□□□□ 0.05
COL1A2-213ENST00000620463 ZBTB9Q96C00 473 aa15.37■□□□□ 0.05
COL1A2-213ENST00000620463 MRC2Q9UBG0 1479 aa15.37■□□□□ 0.05
COL1A2-213ENST00000620463 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
COL1A2-213ENST00000620463 JMYQ8N9B5 988 aa15.37■□□□□ 0.05
COL1A2-213ENST00000620463 TMX3Q96JJ7 454 aa15.37■□□□□ 0.05
COL1A2-213ENST00000620463 KDM4AO75164 1064 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 GNAI2P04899 355 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 IQCEQ6IPM2 695 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 NFXL1Q6ZNB6 911 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 ZNF330Q9Y3S2 320 aaPredicted RBP15.36■□□□□ 0.05
COL1A2-213ENST00000620463 POTEB2H3BUK9 544 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 BANK1Q8NDB2 785 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 ZNHIT6Q9NWK9 470 aaKnown RBP15.36■□□□□ 0.05
COL1A2-213ENST00000620463 TFIP11Q9UBB9 837 aaKnown RBP15.36■□□□□ 0.05
COL1A2-213ENST00000620463 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 CCDC148Q8NFR7 591 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 COG3Q96JB2 828 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms