RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 CEP350Q5VT06 3117 aa20.79■□□□□ 0.92
TMCO3-209ENST00000619336 IP6K1Q92551 441 aa20.78■□□□□ 0.92
TMCO3-209ENST00000619336 RGPD2P0DJD1 1756 aa20.77■□□□□ 0.92
TMCO3-209ENST00000619336 A0A1W2PP64 1363 aa20.77■□□□□ 0.92
TMCO3-209ENST00000619336 NSD2O96028 1365 aa20.77■□□□□ 0.92
TMCO3-209ENST00000619336 ANKRD36BQ8N2N9 1353 aa20.77■□□□□ 0.92
TMCO3-209ENST00000619336 YBX3P16989 372 aaKnown RBP eCLIP20.76■□□□□ 0.91
TMCO3-209ENST00000619336 MSH5O43196 834 aa20.74■□□□□ 0.91
TMCO3-209ENST00000619336 TERF2IPQ9NYB0 399 aa20.74■□□□□ 0.91
TMCO3-209ENST00000619336 CCNL1Q9UK58 526 aaPredicted RBP20.74■□□□□ 0.91
TMCO3-209ENST00000619336 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
TMCO3-209ENST00000619336 MEGF6O75095 1541 aa20.73■□□□□ 0.91
TMCO3-209ENST00000619336 IFFO2Q5TF58 517 aa20.71■□□□□ 0.91
TMCO3-209ENST00000619336 MSL1Q68DK7 614 aa20.71■□□□□ 0.91
TMCO3-209ENST00000619336 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
TMCO3-209ENST00000619336 ZCRB1Q8TBF4 217 aaKnown RBP20.71■□□□□ 0.91
TMCO3-209ENST00000619336 MAP3K19Q56UN5 1328 aa20.71■□□□□ 0.91
TMCO3-209ENST00000619336 GRIN3BO60391 1043 aa20.7■□□□□ 0.9
TMCO3-209ENST00000619336 FBLN1P23142 703 aa20.7■□□□□ 0.9
TMCO3-209ENST00000619336 HOXC9P31274 260 aa20.7■□□□□ 0.9
TMCO3-209ENST00000619336 C5P01031 1676 aa20.68■□□□□ 0.9
TMCO3-209ENST00000619336 AMPHP49418 695 aa20.68■□□□□ 0.9
TMCO3-209ENST00000619336 USP47Q96K76 1375 aa20.68■□□□□ 0.9
TMCO3-209ENST00000619336 ATP10DQ9P241 1426 aa20.68■□□□□ 0.9
TMCO3-209ENST00000619336 COG3Q96JB2 828 aa20.67■□□□□ 0.9
TMCO3-209ENST00000619336 USHBP1Q8N6Y0 703 aa20.65■□□□□ 0.9
TMCO3-209ENST00000619336 TAF1LQ8IZX4 1826 aa20.64■□□□□ 0.89
TMCO3-209ENST00000619336 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
TMCO3-209ENST00000619336 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
TMCO3-209ENST00000619336 PUS7Q96PZ0 661 aaKnown RBP20.62■□□□□ 0.89
TMCO3-209ENST00000619336 RRS1Q15050 365 aaKnown RBP20.61■□□□□ 0.89
TMCO3-209ENST00000619336 RTL1A6NKG5 1358 aa20.6■□□□□ 0.89
TMCO3-209ENST00000619336 ZNF526Q8TF50 670 aaPredicted RBP20.6■□□□□ 0.89
TMCO3-209ENST00000619336 GPBP1L1Q9HC44 474 aaPredicted RBP20.6■□□□□ 0.89
TMCO3-209ENST00000619336 CD2APQ9Y5K6 639 aa20.6■□□□□ 0.89
TMCO3-209ENST00000619336 RAPGEF4Q8WZA2 1011 aa20.59■□□□□ 0.89
TMCO3-209ENST00000619336 ADCY9O60503 1353 aa20.59■□□□□ 0.89
TMCO3-209ENST00000619336 PALLDQ8WX93 1383 aa20.59■□□□□ 0.89
TMCO3-209ENST00000619336 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.89
TMCO3-209ENST00000619336 C4BP0C0L5 1744 aa20.58■□□□□ 0.88
TMCO3-209ENST00000619336 TOGARAM1Q9Y4F4 1720 aa20.58■□□□□ 0.88
TMCO3-209ENST00000619336 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
TMCO3-209ENST00000619336 TESK2Q96S53 571 aa20.57■□□□□ 0.88
TMCO3-209ENST00000619336 WWC3Q9ULE0 1092 aa20.57■□□□□ 0.88
TMCO3-209ENST00000619336 ITGB4P16144 1822 aa20.56■□□□□ 0.88
TMCO3-209ENST00000619336 TATP17735 454 aaPredicted RBP20.56■□□□□ 0.88
TMCO3-209ENST00000619336 MPRIPQ6WCQ1 1025 aa20.56■□□□□ 0.88
TMCO3-209ENST00000619336 FLAD1Q8NFF5 587 aa20.56■□□□□ 0.88
TMCO3-209ENST00000619336 PCDH11XQ9BZA7 1347 aa20.55■□□□□ 0.88
TMCO3-209ENST00000619336 PCDH11YQ9BZA8 1340 aa20.55■□□□□ 0.88
TMCO3-209ENST00000619336 AMIGO3Q86WK7 504 aa20.55■□□□□ 0.88
TMCO3-209ENST00000619336 GGNBP2Q9H3C7 697 aa20.55■□□□□ 0.88
TMCO3-209ENST00000619336 UBR3Q6ZT12 1888 aa20.55■□□□□ 0.88
TMCO3-209ENST00000619336 ST20-MTHFSA0A0A6YYL1 179 aa20.54■□□□□ 0.88
TMCO3-209ENST00000619336 HSPA6P17066 643 aa20.54■□□□□ 0.88
TMCO3-209ENST00000619336 SMIM5Q71RC9 77 aa20.54■□□□□ 0.88
TMCO3-209ENST00000619336 IGSF1Q8N6C5 1336 aa20.53■□□□□ 0.88
TMCO3-209ENST00000619336 PHF14O94880 888 aa20.53■□□□□ 0.88
TMCO3-209ENST00000619336 AK7Q96M32 723 aa20.53■□□□□ 0.88
TMCO3-209ENST00000619336 TONSLQ96HA7 1378 aa20.52■□□□□ 0.88
TMCO3-209ENST00000619336 FYB1O15117 783 aa20.52■□□□□ 0.88
TMCO3-209ENST00000619336 HSP90AB2PQ58FF8 381 aa20.52■□□□□ 0.88
TMCO3-209ENST00000619336 KIF20BQ96Q89 1820 aa20.51■□□□□ 0.87
TMCO3-209ENST00000619336 CYP27B1O15528 508 aa20.51■□□□□ 0.87
TMCO3-209ENST00000619336 INSRP06213 1382 aa20.5■□□□□ 0.87
TMCO3-209ENST00000619336 PKD1L3Q7Z443 1732 aa20.5■□□□□ 0.87
TMCO3-209ENST00000619336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.49■□□□□ 0.87
TMCO3-209ENST00000619336 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
TMCO3-209ENST00000619336 SMARCC1Q92922 1105 aaPredicted RBP20.48■□□□□ 0.87
TMCO3-209ENST00000619336 MAP2P11137 1827 aaKnown RBP20.48■□□□□ 0.87
TMCO3-209ENST00000619336 FLT4P35916 1363 aa20.47■□□□□ 0.87
TMCO3-209ENST00000619336 PIGBQ92521 554 aa20.47■□□□□ 0.87
TMCO3-209ENST00000619336 NSD3Q9BZ95 1437 aa20.46■□□□□ 0.87
TMCO3-209ENST00000619336 LINC00116Q8NCU8 138 aa20.45■□□□□ 0.86
TMCO3-209ENST00000619336 KIF3CO14782 793 aa20.44■□□□□ 0.86
TMCO3-209ENST00000619336 SSFA2P28290 1259 aa20.44■□□□□ 0.86
TMCO3-209ENST00000619336 CICQ96RK0 1608 aaPredicted RBP20.43■□□□□ 0.86
TMCO3-209ENST00000619336 LOC102724428A0A0B4J2F2 783 aa20.43■□□□□ 0.86
TMCO3-209ENST00000619336 SIK1P57059 783 aa20.43■□□□□ 0.86
TMCO3-209ENST00000619336 KIF24Q5T7B8 1368 aa20.43■□□□□ 0.86
TMCO3-209ENST00000619336 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
TMCO3-209ENST00000619336 EMILIN1Q9Y6C2 1016 aa20.42■□□□□ 0.86
TMCO3-209ENST00000619336 GNPATO15228 680 aa20.41■□□□□ 0.86
TMCO3-209ENST00000619336 N4BP2Q86UW6 1770 aaPredicted RBP20.41■□□□□ 0.86
TMCO3-209ENST00000619336 TMF1P82094 1093 aa20.4■□□□□ 0.86
TMCO3-209ENST00000619336 ITPK1Q13572 414 aa20.4■□□□□ 0.86
TMCO3-209ENST00000619336 NCAPD2Q15021 1401 aa20.4■□□□□ 0.86
TMCO3-209ENST00000619336 NKX1-1Q15270 411 aaPredicted RBP20.4■□□□□ 0.86
TMCO3-209ENST00000619336 KIAA1551Q9HCM1 1747 aa20.4■□□□□ 0.86
TMCO3-209ENST00000619336 KIF13BQ9NQT8 1826 aa20.39■□□□□ 0.86
TMCO3-209ENST00000619336 PXDNLA1KZ92 1463 aa20.39■□□□□ 0.85
TMCO3-209ENST00000619336 TMOD3Q9NYL9 352 aa20.39■□□□□ 0.85
TMCO3-209ENST00000619336 ASAP1Q9ULH1 1129 aa20.39■□□□□ 0.85
TMCO3-209ENST00000619336 SPG7Q9UQ90 795 aa20.39■□□□□ 0.85
TMCO3-209ENST00000619336 PPM1GO15355 546 aaPredicted RBP20.38■□□□□ 0.85
TMCO3-209ENST00000619336 MMP10P09238 476 aa20.38■□□□□ 0.85
TMCO3-209ENST00000619336 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
TMCO3-209ENST00000619336 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
TMCO3-209ENST00000619336 APLP1P51693 650 aa20.35■□□□□ 0.85
TMCO3-209ENST00000619336 BCS1LQ9Y276 419 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms