RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-221ENST00000618363 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
SHANK2-221ENST00000618363 USHBP1Q8N6Y0 703 aa16.02■□□□□ 0.16
SHANK2-221ENST00000618363 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
SHANK2-221ENST00000618363 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
SHANK2-221ENST00000618363 RREB1Q92766 1687 aa16.01■□□□□ 0.15
SHANK2-221ENST00000618363 MORC1Q86VD1 984 aa16■□□□□ 0.15
SHANK2-221ENST00000618363 RGPD3A6NKT7 1758 aaPredicted RBP16■□□□□ 0.15
SHANK2-221ENST00000618363 RGPD4Q7Z3J3 1758 aa16■□□□□ 0.15
SHANK2-221ENST00000618363 NSD2O96028 1365 aa16■□□□□ 0.15
SHANK2-221ENST00000618363 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
SHANK2-221ENST00000618363 WASHC2AQ641Q2 1341 aa15.99■□□□□ 0.15
SHANK2-221ENST00000618363 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
SHANK2-221ENST00000618363 POLKQ9UBT6 870 aa15.98■□□□□ 0.15
SHANK2-221ENST00000618363 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
SHANK2-221ENST00000618363 NHSQ6T4R5 1651 aa15.98■□□□□ 0.15
SHANK2-221ENST00000618363 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
SHANK2-221ENST00000618363 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
SHANK2-221ENST00000618363 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
SHANK2-221ENST00000618363 LRP5O75197 1615 aa15.97■□□□□ 0.15
SHANK2-221ENST00000618363 MEGF6O75095 1541 aa15.96■□□□□ 0.15
SHANK2-221ENST00000618363 PROM2Q8N271 834 aa15.96■□□□□ 0.15
SHANK2-221ENST00000618363 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
SHANK2-221ENST00000618363 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
SHANK2-221ENST00000618363 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
SHANK2-221ENST00000618363 KIF7Q2M1P5 1343 aa15.95■□□□□ 0.14
SHANK2-221ENST00000618363 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
SHANK2-221ENST00000618363 HMGB2P26583 209 aaKnown RBP15.94■□□□□ 0.14
SHANK2-221ENST00000618363 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
SHANK2-221ENST00000618363 SLC27A3Q5K4L6 730 aa15.93■□□□□ 0.14
SHANK2-221ENST00000618363 EYA1Q99502 592 aa15.93■□□□□ 0.14
SHANK2-221ENST00000618363 ANO8Q9HCE9 1232 aaPredicted RBP15.93■□□□□ 0.14
SHANK2-221ENST00000618363 BTAF1O14981 1849 aa15.92■□□□□ 0.14
SHANK2-221ENST00000618363 EIF4A2Q14240 407 aaKnown RBP15.92■□□□□ 0.14
SHANK2-221ENST00000618363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.9■□□□□ 0.145e-8■□□□□ 11
SHANK2-221ENST00000618363 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
SHANK2-221ENST00000618363 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 CYP27B1O15528 508 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 ZBTB7AO95365 584 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 CCNL1Q9UK58 526 aaPredicted RBP15.88■□□□□ 0.13
SHANK2-221ENST00000618363 SRCAPQ6ZRS2 3230 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 PLEKHO1Q53GL0 409 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-221ENST00000618363 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-221ENST00000618363 CC2D1BQ5T0F9 858 aaKnown RBP15.87■□□□□ 0.13
SHANK2-221ENST00000618363 SMARCC1Q92922 1105 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-221ENST00000618363 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
SHANK2-221ENST00000618363 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
SHANK2-221ENST00000618363 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
SHANK2-221ENST00000618363 TFCP2L1Q9NZI6 479 aa15.86■□□□□ 0.13
SHANK2-221ENST00000618363 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
SHANK2-221ENST00000618363 HSP90AB1P08238 724 aaKnown RBP15.85■□□□□ 0.13
SHANK2-221ENST00000618363 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 MTFR1LQ9H019 292 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
SHANK2-221ENST00000618363 TMOD3Q9NYL9 352 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 IGSF1Q8N6C5 1336 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
SHANK2-221ENST00000618363 PHKG2P15735 406 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 MTHFSP49914 203 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 KCNQ4P56696 695 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 PDGFDQ9GZP0 370 aaPredicted RBP15.83■□□□□ 0.12
SHANK2-221ENST00000618363 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 PKD1L3Q7Z443 1732 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
SHANK2-221ENST00000618363 ZNF827Q17R98 1081 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 SULT6B1Q6IMI4 303 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 SLC16A10Q8TF71 515 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 PALLDQ8WX93 1383 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 ZNF530Q6P9A1 599 aaPredicted RBP15.81■□□□□ 0.12
SHANK2-221ENST00000618363 POLD1P28340 1107 aa15.8■□□□□ 0.12
SHANK2-221ENST00000618363 IL13P35225 146 aa15.8■□□□□ 0.12
SHANK2-221ENST00000618363 PIGBQ92521 554 aa15.8■□□□□ 0.12
SHANK2-221ENST00000618363 CASZ1Q86V15 1759 aa15.8■□□□□ 0.12
SHANK2-221ENST00000618363 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
SHANK2-221ENST00000618363 DCAF5Q96JK2 942 aa15.79■□□□□ 0.12
SHANK2-221ENST00000618363 LY75O60449 1722 aa15.79■□□□□ 0.12
SHANK2-221ENST00000618363 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 ERVV-2B6SEH9 535 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 AEBP1Q8IUX7 1158 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 FLAD1Q8NFF5 587 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 PAPPAQ13219 1627 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 CABP4P57796 275 aa15.77■□□□□ 0.12
SHANK2-221ENST00000618363 AK7Q96M32 723 aa15.77■□□□□ 0.12
SHANK2-221ENST00000618363 CFAP53Q96M91 514 aa15.77■□□□□ 0.12
SHANK2-221ENST00000618363 ARXQ96QS3 562 aa15.77■□□□□ 0.12
SHANK2-221ENST00000618363 ITGB4P16144 1822 aa15.77■□□□□ 0.11
SHANK2-221ENST00000618363 PNPLA7Q6ZV29 1317 aa15.76■□□□□ 0.11
SHANK2-221ENST00000618363 PTGER2P43116 358 aa15.76■□□□□ 0.11
SHANK2-221ENST00000618363 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
SHANK2-221ENST00000618363 HMOX1P09601 288 aa15.75■□□□□ 0.11
SHANK2-221ENST00000618363 ATP6V1AP38606 617 aa15.75■□□□□ 0.11
SHANK2-221ENST00000618363 SIK1P57059 783 aa15.75■□□□□ 0.11
SHANK2-221ENST00000618363 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
SHANK2-221ENST00000618363 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
SHANK2-221ENST00000618363 KLHL34Q8N239 644 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms