RNA–Protein interactions for RNA: ENST00000617244.1

AC040978.1-201, humanhuman

BASIC

Gene AC040978.1, Length 1,282 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040978.1-201ENST00000617244 U2AF1Q01081 240 aaKnown RBP eCLIP11.23□□□□□ -0.61
AC040978.1-201ENST00000617244 PSME1Q06323 249 aa11.23□□□□□ -0.61
AC040978.1-201ENST00000617244 MTERF4Q7Z6M4 381 aaKnown RBP11.23□□□□□ -0.61
AC040978.1-201ENST00000617244 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
AC040978.1-201ENST00000617244 FOXO3O43524 673 aa11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 HSP90AB1P08238 724 aaKnown RBP11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 MFAP1P55081 439 aaKnown RBP11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 HSP90AA2PQ14568 343 aaPredicted RBP11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 KLHL40Q2TBA0 621 aa11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 BRINP3Q76B58 766 aa11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
AC040978.1-201ENST00000617244 ACEP12821 1306 aa11.21□□□□□ -0.61
AC040978.1-201ENST00000617244 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.61
AC040978.1-201ENST00000617244 RABEP1Q15276 862 aa11.21□□□□□ -0.61
AC040978.1-201ENST00000617244 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
AC040978.1-201ENST00000617244 MON2Q7Z3U7 1717 aa11.21□□□□□ -0.62
AC040978.1-201ENST00000617244 A0A1W2PP64 1363 aa11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 NPHP3Q7Z494 1330 aa11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 ZNF445P59923 1031 aa11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 LMOD3Q0VAK6 560 aa11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 SSH1Q8WYL5 1049 aa11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 NAP1L5Q96NT1 182 aaPredicted RBP11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 PHLPP1O60346 1717 aa11.2□□□□□ -0.62
AC040978.1-201ENST00000617244 PLEKHG3A1L390 1219 aa11.19□□□□□ -0.62
AC040978.1-201ENST00000617244 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
AC040978.1-201ENST00000617244 EXOSC9Q06265 439 aaKnown RBP11.19□□□□□ -0.62
AC040978.1-201ENST00000617244 ZSCAN30Q86W11 494 aa11.19□□□□□ -0.62
AC040978.1-201ENST00000617244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.19□□□□□ -0.62
AC040978.1-201ENST00000617244 TNPO1Q92973 898 aaKnown RBP11.19□□□□□ -0.62
AC040978.1-201ENST00000617244 KIF20BQ96Q89 1820 aa11.19□□□□□ -0.62
AC040978.1-201ENST00000617244 CDC45O75419 566 aa11.18□□□□□ -0.62
AC040978.1-201ENST00000617244 CSPP1Q1MSJ5 1256 aa11.18□□□□□ -0.62
AC040978.1-201ENST00000617244 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
AC040978.1-201ENST00000617244 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
AC040978.1-201ENST00000617244 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
AC040978.1-201ENST00000617244 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 EPB41L2O43491 1005 aaKnown RBP11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 DIAPH1O60610 1272 aaKnown RBP11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 GNAI1P63096 354 aa11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 NEUROD2Q15784 382 aa11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 CASC1Q6TDU7 716 aa11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 USP6P35125 1406 aa11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 EDC4Q6P2E9 1401 aaKnown RBP11.17□□□□□ -0.62
AC040978.1-201ENST00000617244 OFD1O75665 1012 aa11.16□□□□□ -0.62
AC040978.1-201ENST00000617244 MCM2P49736 904 aa11.16□□□□□ -0.62
AC040978.1-201ENST00000617244 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
AC040978.1-201ENST00000617244 IFT57Q9NWB7 429 aa11.16□□□□□ -0.62
AC040978.1-201ENST00000617244 RRP7AQ9Y3A4 280 aaKnown RBP11.16□□□□□ -0.62
AC040978.1-201ENST00000617244 CD163L1Q9NR16 1453 aa11.16□□□□□ -0.62
AC040978.1-201ENST00000617244 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
AC040978.1-201ENST00000617244 NRKQ7Z2Y5 1582 aa11.16□□□□□ -0.62
AC040978.1-201ENST00000617244 ZBTB7BO15156 539 aaPredicted RBP11.15□□□□□ -0.62
AC040978.1-201ENST00000617244 RIPK4P57078 832 aa11.15□□□□□ -0.62
AC040978.1-201ENST00000617244 AHDC1Q5TGY3 1603 aaPredicted RBP11.15□□□□□ -0.62
AC040978.1-201ENST00000617244 TRPM3Q9HCF6 1732 aaPredicted RBP11.15□□□□□ -0.63
AC040978.1-201ENST00000617244 ABCC4O15439 1325 aa11.14□□□□□ -0.63
AC040978.1-201ENST00000617244 PXDNQ92626 1479 aa11.14□□□□□ -0.63
AC040978.1-201ENST00000617244 ZNF500O60304 480 aaPredicted RBP11.14□□□□□ -0.63
AC040978.1-201ENST00000617244 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
AC040978.1-201ENST00000617244 NASPP49321 788 aaPredicted RBP11.14□□□□□ -0.63
AC040978.1-201ENST00000617244 NUTM2GQ5VZR2 741 aa11.14□□□□□ -0.63
AC040978.1-201ENST00000617244 ABTB2Q8N961 1025 aa11.14□□□□□ -0.63
AC040978.1-201ENST00000617244 TTC21BQ7Z4L5 1316 aa11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 TTC21AQ8NDW8 1320 aa11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 TNS3Q68CZ2 1445 aa11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 ST18O60284 1047 aa11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 RPAP2Q8IXW5 612 aaPredicted RBP11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 KIF2CQ99661 725 aa11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 BCL2L13Q9BXK5 485 aa11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 PANK2Q9BZ23 570 aa11.13□□□□□ -0.63
AC040978.1-201ENST00000617244 PIK3C2AO00443 1686 aa11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 SOX12O15370 315 aa11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 MBD3O95983 291 aa11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 NLRP6P59044 892 aa11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 NME9Q86XW9 330 aa11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 GGNBP2Q9H3C7 697 aa11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 ARHGEF10O15013 1369 aa11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 AATKQ6ZMQ8 1374 aa11.12□□□□□ -0.63
AC040978.1-201ENST00000617244 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 COL16A1Q07092 1604 aaPredicted RBP11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 REC8O95072 547 aa11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 BAG4O95429 457 aaKnown RBP11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 CYP2E1P05181 493 aaPredicted RBP11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 ZNF853P0CG23 659 aa11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 NFE2L2Q16236 605 aa11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 MRPL50Q8N5N7 158 aaKnown RBP11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 LRRC59Q96AG4 307 aaKnown RBP11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 COG3Q96JB2 828 aa11.11□□□□□ -0.63
AC040978.1-201ENST00000617244 PDLIM2Q96JY6 352 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms