RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 MTHFSDQ2M296 383 aaKnown RBP8.81□□□□□ -1
CSDE1-218ENST00000610726 CPLX2Q6PUV4 134 aaKnown RBP8.81□□□□□ -1
CSDE1-218ENST00000610726 IFNL2Q8IZJ0 200 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 DNAAF4Q8WXU2 420 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 EYA1Q99502 592 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 MYD88Q99836 296 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 DBF4Q9UBU7 674 aaPredicted RBP8.81□□□□□ -1
CSDE1-218ENST00000610726 SMC3Q9UQE7 1217 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 NPHP3Q7Z494 1330 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 NRDCO43847 1150 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 IGHDP01880 384 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 GCP02774 474 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 BICDL1Q6ZP65 573 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 NOL10Q9BSC4 688 aaKnown RBP8.81□□□□□ -1
CSDE1-218ENST00000610726 ATP6V1DQ9Y5K8 247 aa8.81□□□□□ -1
CSDE1-218ENST00000610726 LRRFIP2Q9Y608 721 aaKnown RBP8.81□□□□□ -1
CSDE1-218ENST00000610726 PI4KAP2A4QPH2 592 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 RAD21O60216 631 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 STARD3NLO95772 234 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 AKAP17AQ02040 695 aaKnown RBP8.8□□□□□ -1
CSDE1-218ENST00000610726 RALYLQ86SE5 291 aaKnown RBP8.8□□□□□ -1
CSDE1-218ENST00000610726 TSPYL6Q8N831 410 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 PI4KAP1Q8N8J0 262 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 RASSF8Q8NHQ8 419 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 NGLY1Q96IV0 654 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 MYO5CQ9NQX4 1742 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 SLC39A6Q13433 755 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
CSDE1-218ENST00000610726 IL16Q14005 1332 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 NFKBIBQ15653 356 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 KLHL34Q8N239 644 aa8.8□□□□□ -1
CSDE1-218ENST00000610726 NFXL1Q6ZNB6 911 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 CEP126Q9P2H0 1117 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 DMRT2Q9Y5R5 561 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 EXOC5O00471 708 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 MPHOSPH8Q99549 860 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 PCDHB15Q9Y5E8 787 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 GCC2Q8IWJ2 1684 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 PIK3C2GO75747 1445 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 SPATA31E1Q6ZUB1 1445 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 CCDC158Q5M9N0 1113 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 FMNL2Q96PY5 1086 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 ZBTB3Q9H5J0 574 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 TMEM2Q9UHN6 1383 aa8.79□□□□□ -1
CSDE1-218ENST00000610726 FKBP4Q02790 459 aaKnown RBP eCLIP8.78□□□□□ -1
CSDE1-218ENST00000610726 GSE1Q14687 1217 aa8.78□□□□□ -1
CSDE1-218ENST00000610726 CWC27Q6UX04 472 aaKnown RBP8.78□□□□□ -1
CSDE1-218ENST00000610726 FLT4P35916 1363 aa8.78□□□□□ -1
CSDE1-218ENST00000610726 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
CSDE1-218ENST00000610726 ATP5J2-PTCD1G3V325 749 aa8.78□□□□□ -1
CSDE1-218ENST00000610726 TBC1D2BQ9UPU7 963 aa8.78□□□□□ -1
CSDE1-218ENST00000610726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.78□□□□□ -1
CSDE1-218ENST00000610726 NUCB2P80303 420 aa8.78□□□□□ -1
CSDE1-218ENST00000610726 JARID2Q92833 1246 aaPredicted RBP8.78□□□□□ -1
CSDE1-218ENST00000610726 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
CSDE1-218ENST00000610726 RLBP1P12271 317 aa8.78□□□□□ -1
CSDE1-218ENST00000610726 TTC39AQ5SRH9 613 aa8.78□□□□□ -1
CSDE1-218ENST00000610726 KDM4AO75164 1064 aa8.77□□□□□ -1
CSDE1-218ENST00000610726 RABEP1Q15276 862 aa8.77□□□□□ -1
CSDE1-218ENST00000610726 AMOTL1Q8IY63 956 aa8.77□□□□□ -1
CSDE1-218ENST00000610726 KIF1BPQ96EK5 621 aa8.77□□□□□ -1
CSDE1-218ENST00000610726 MEIS3Q99687 375 aa8.77□□□□□ -1
CSDE1-218ENST00000610726 PHF23Q9BUL5 403 aaPredicted RBP8.77□□□□□ -1
CSDE1-218ENST00000610726 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1
CSDE1-218ENST00000610726 MAP3K2Q9Y2U5 619 aa8.77□□□□□ -1
CSDE1-218ENST00000610726 PTPRTO14522 1441 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 A0A087WZG4 1122 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 PIP4K2AP48426 406 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-218ENST00000610726 PTPRCP08575 1304 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 MX1P20591 662 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 HOXC9P31274 260 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 CREBRFQ8IUR6 639 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 CHMP4CQ96CF2 233 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 HYPKQ9NX55 129 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 ZFYVE16Q7Z3T8 1539 aa8.77□□□□□ -1.01
CSDE1-218ENST00000610726 GPTP24298 496 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 DDX17Q92841 729 aaKnown RBP8.76□□□□□ -1.01
CSDE1-218ENST00000610726 CHPF2Q9P2E5 772 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 ZCCHC11Q5TAX3 1644 aaKnown RBP8.76□□□□□ -1.01
CSDE1-218ENST00000610726 DHX16O60231 1041 aaKnown RBP8.76□□□□□ -1.01
CSDE1-218ENST00000610726 VAMP4O75379 141 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 PSMA5P28066 241 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 CCDC34Q96HJ3 373 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 CCDC8Q9H0W5 538 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-218ENST00000610726 ERICH2A1L162 156 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 HIP1O00291 1037 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 MARCH6O60337 910 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 TRIM29Q14134 588 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 SKOR2Q2VWA4 1001 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-218ENST00000610726 STK11IPQ8N1F8 1099 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 BOLA2Q9H3K6 86 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 ADGBQ8N7X0 1667 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 TSHZ3Q63HK5 1081 aa8.76□□□□□ -1.01
CSDE1-218ENST00000610726 PHF14O94880 888 aa8.75□□□□□ -1.01
CSDE1-218ENST00000610726 IL13P35225 146 aa8.75□□□□□ -1.01
CSDE1-218ENST00000610726 RRP12Q5JTH9 1297 aaKnown RBP8.75□□□□□ -1.01
CSDE1-218ENST00000610726 VPS53Q5VIR6 699 aa8.75□□□□□ -1.01
CSDE1-218ENST00000610726 ZCRB1Q8TBF4 217 aaKnown RBP8.75□□□□□ -1.01
CSDE1-218ENST00000610726 NPC1L1Q9UHC9 1359 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms