RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 MEN1O00255 615 aa9.36□□□□□ -0.91
HDDC2-207ENST00000608532 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
HDDC2-207ENST00000608532 CYP2U1Q7Z449 544 aa9.36□□□□□ -0.91
HDDC2-207ENST00000608532 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
HDDC2-207ENST00000608532 ALG2Q9H553 416 aa9.36□□□□□ -0.91
HDDC2-207ENST00000608532 VEGFBP49765 207 aa9.35□□□□□ -0.91
HDDC2-207ENST00000608532 OSBPL3Q9H4L5 887 aa9.35□□□□□ -0.91
HDDC2-207ENST00000608532 SKIP12755 728 aa9.34□□□□□ -0.91
HDDC2-207ENST00000608532 HDGFL1Q5TGJ6 251 aa9.34□□□□□ -0.91
HDDC2-207ENST00000608532 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
HDDC2-207ENST00000608532 A0A1W2PRU2 124 aa9.33□□□□□ -0.92
HDDC2-207ENST00000608532 USP4Q13107 963 aa9.33□□□□□ -0.92
HDDC2-207ENST00000608532 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.33□□□□□ -0.92
HDDC2-207ENST00000608532 ARHGEF10LQ9HCE6 1279 aa9.33□□□□□ -0.92
HDDC2-207ENST00000608532 RAB6BQ9NRW1 208 aa9.33□□□□□ -0.92
HDDC2-207ENST00000608532 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
HDDC2-207ENST00000608532 ADAMTS19Q8TE59 1207 aa9.32□□□□□ -0.92
HDDC2-207ENST00000608532 NLRP3Q96P20 1036 aa9.32□□□□□ -0.92
HDDC2-207ENST00000608532 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
HDDC2-207ENST00000608532 A6NJR5 290 aa9.31□□□□□ -0.92
HDDC2-207ENST00000608532 TRAK2O60296 914 aa9.31□□□□□ -0.92
HDDC2-207ENST00000608532 MAP7D1Q3KQU3 841 aa9.31□□□□□ -0.92
HDDC2-207ENST00000608532 FNBP4Q8N3X1 1017 aaPredicted RBP9.31□□□□□ -0.92
HDDC2-207ENST00000608532 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
HDDC2-207ENST00000608532 WFS1O76024 890 aa9.3□□□□□ -0.92
HDDC2-207ENST00000608532 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
HDDC2-207ENST00000608532 RNF217Q8TC41 542 aa9.3□□□□□ -0.92
HDDC2-207ENST00000608532 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
HDDC2-207ENST00000608532 CHIC2Q9UKJ5 165 aa9.3□□□□□ -0.92
HDDC2-207ENST00000608532 SLC27A3Q5K4L6 730 aa9.29□□□□□ -0.92
HDDC2-207ENST00000608532 TREML4Q6UXN2 200 aa9.29□□□□□ -0.92
HDDC2-207ENST00000608532 PRICKLE2Q7Z3G6 844 aa9.29□□□□□ -0.92
HDDC2-207ENST00000608532 DEPDC4Q8N2C3 294 aa9.29□□□□□ -0.92
HDDC2-207ENST00000608532 STAU1O95793 577 aaKnown RBP9.28□□□□□ -0.92
HDDC2-207ENST00000608532 GNRH1P01148 92 aa9.28□□□□□ -0.92
HDDC2-207ENST00000608532 PTSQ03393 145 aa9.28□□□□□ -0.92
HDDC2-207ENST00000608532 NFX1Q12986 1120 aaKnown RBP9.28□□□□□ -0.92
HDDC2-207ENST00000608532 CLN3Q13286 438 aa9.28□□□□□ -0.92
HDDC2-207ENST00000608532 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
HDDC2-207ENST00000608532 SLC16A10Q8TF71 515 aa9.28□□□□□ -0.92
HDDC2-207ENST00000608532 GLMNQ92990 594 aa9.28□□□□□ -0.92
HDDC2-207ENST00000608532 RHOQP17081 205 aa9.27□□□□□ -0.93
HDDC2-207ENST00000608532 RNF144AP50876 292 aaPredicted RBP9.27□□□□□ -0.93
HDDC2-207ENST00000608532 EML3Q32P44 896 aa9.27□□□□□ -0.93
HDDC2-207ENST00000608532 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
HDDC2-207ENST00000608532 NCOA4Q13772 614 aa9.26□□□□□ -0.93
HDDC2-207ENST00000608532 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
HDDC2-207ENST00000608532 CNKSR1Q969H4 720 aa9.26□□□□□ -0.93
HDDC2-207ENST00000608532 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
HDDC2-207ENST00000608532 PPFIA3O75145 1194 aa9.25□□□□□ -0.93
HDDC2-207ENST00000608532 IL2RAP01589 272 aa9.25□□□□□ -0.93
HDDC2-207ENST00000608532 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
HDDC2-207ENST00000608532 UCN2Q96RP3 112 aa9.25□□□□□ -0.93
HDDC2-207ENST00000608532 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
HDDC2-207ENST00000608532 H3BM21 787 aa9.24□□□□□ -0.93
HDDC2-207ENST00000608532 PSME1Q06323 249 aa9.24□□□□□ -0.93
HDDC2-207ENST00000608532 ESCO1Q5FWF5 840 aa9.24□□□□□ -0.93
HDDC2-207ENST00000608532 ESYT1Q9BSJ8 1104 aa9.24□□□□□ -0.93
HDDC2-207ENST00000608532 NOD1Q9Y239 953 aa9.24□□□□□ -0.93
HDDC2-207ENST00000608532 GPC1P35052 558 aa9.23□□□□□ -0.93
HDDC2-207ENST00000608532 CENPCQ03188 943 aa9.23□□□□□ -0.93
HDDC2-207ENST00000608532 POU4F2Q12837 409 aa9.23□□□□□ -0.93
HDDC2-207ENST00000608532 NPAS3Q8IXF0 933 aa9.23□□□□□ -0.93
HDDC2-207ENST00000608532 CCDC155Q8N6L0 562 aa9.23□□□□□ -0.93
HDDC2-207ENST00000608532 ETNK1Q9HBU6 452 aa9.23□□□□□ -0.93
HDDC2-207ENST00000608532 SLC35F4A4IF30 521 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 ATP9BO43861 1147 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.94
HDDC2-207ENST00000608532 GDF10P55107 478 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 GTF2IP78347 998 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 IRF7Q92985 503 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 XAGE2Q96GT9 111 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 GRIP2Q9C0E4 1043 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 TFIP11Q9UBB9 837 aaKnown RBP9.21□□□□□ -0.94
HDDC2-207ENST00000608532 SERTAD1Q9UHV2 236 aa9.21□□□□□ -0.94
HDDC2-207ENST00000608532 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
HDDC2-207ENST00000608532 TLR1Q15399 786 aa9.2□□□□□ -0.94
HDDC2-207ENST00000608532 ZSCAN10Q96SZ4 725 aaPredicted RBP9.2□□□□□ -0.94
HDDC2-207ENST00000608532 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
HDDC2-207ENST00000608532 SCNN1DP51172 638 aa9.19□□□□□ -0.94
HDDC2-207ENST00000608532 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
HDDC2-207ENST00000608532 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
HDDC2-207ENST00000608532 TMEM214Q6NUQ4 689 aaKnown RBP9.19□□□□□ -0.94
HDDC2-207ENST00000608532 ZMYND15Q9H091 742 aa9.19□□□□□ -0.94
HDDC2-207ENST00000608532 PCDHGA11Q9Y5H2 935 aa9.19□□□□□ -0.94
HDDC2-207ENST00000608532 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
HDDC2-207ENST00000608532 CDC14CA4D256 554 aa9.18□□□□□ -0.94
HDDC2-207ENST00000608532 INHAP05111 366 aa9.18□□□□□ -0.94
HDDC2-207ENST00000608532 PHKA2P46019 1235 aa9.18□□□□□ -0.94
HDDC2-207ENST00000608532 GNASQ5JWF2 1037 aa9.18□□□□□ -0.94
HDDC2-207ENST00000608532 NBPF10Q6P3W6 841 aaKnown RBP9.18□□□□□ -0.94
HDDC2-207ENST00000608532 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
HDDC2-207ENST00000608532 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
HDDC2-207ENST00000608532 PALM3A6NDB9 673 aaPredicted RBP9.17□□□□□ -0.94
HDDC2-207ENST00000608532 GMPRP36959 345 aa9.17□□□□□ -0.94
HDDC2-207ENST00000608532 RIPOR1Q6ZS17 1223 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms