RNA–Protein interactions for RNA: ENST00000608369.1

LINC00963-211, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 961 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-211ENST00000608369 TFCP2L1Q9NZI6 479 aa15.71■□□□□ 0.11
LINC00963-211ENST00000608369 COG3Q96JB2 828 aa15.7■□□□□ 0.1
LINC00963-211ENST00000608369 SLC12A5Q9H2X9 1139 aa15.7■□□□□ 0.1
LINC00963-211ENST00000608369 RTL1A6NKG5 1358 aa15.7■□□□□ 0.1
LINC00963-211ENST00000608369 GRIN3BO60391 1043 aa15.69■□□□□ 0.1
LINC00963-211ENST00000608369 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
LINC00963-211ENST00000608369 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
LINC00963-211ENST00000608369 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
LINC00963-211ENST00000608369 ZCRB1Q8TBF4 217 aaKnown RBP15.67■□□□□ 0.1
LINC00963-211ENST00000608369 LY75O60449 1722 aa15.67■□□□□ 0.1
LINC00963-211ENST00000608369 SMG6Q86US8 1419 aaKnown RBP15.67■□□□□ 0.1
LINC00963-211ENST00000608369 USP47Q96K76 1375 aa15.66■□□□□ 0.1
LINC00963-211ENST00000608369 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
LINC00963-211ENST00000608369 HOXC9P31274 260 aa15.66■□□□□ 0.1
LINC00963-211ENST00000608369 AMPHP49418 695 aa15.66■□□□□ 0.1
LINC00963-211ENST00000608369 FLAD1Q8NFF5 587 aa15.66■□□□□ 0.1
LINC00963-211ENST00000608369 SYTL4Q96C24 671 aaPredicted RBP15.66■□□□□ 0.1
LINC00963-211ENST00000608369 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
LINC00963-211ENST00000608369 CCNL1Q9UK58 526 aaPredicted RBP15.65■□□□□ 0.1
LINC00963-211ENST00000608369 MAP3K19Q56UN5 1328 aa15.65■□□□□ 0.1
LINC00963-211ENST00000608369 KIF24Q5T7B8 1368 aa15.64■□□□□ 0.09
LINC00963-211ENST00000608369 DOT1LQ8TEK3 1739 aa15.64■□□□□ 0.09
LINC00963-211ENST00000608369 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
LINC00963-211ENST00000608369 RAPGEF4Q8WZA2 1011 aa15.63■□□□□ 0.09
LINC00963-211ENST00000608369 NSD2O96028 1365 aa15.62■□□□□ 0.09
LINC00963-211ENST00000608369 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
LINC00963-211ENST00000608369 LTV1Q96GA3 475 aaPredicted RBP15.62■□□□□ 0.09
LINC00963-211ENST00000608369 PCDH11XQ9BZA7 1347 aa15.61■□□□□ 0.09
LINC00963-211ENST00000608369 PCDH11YQ9BZA8 1340 aa15.61■□□□□ 0.09
LINC00963-211ENST00000608369 TUBGCP6Q96RT7 1819 aa15.61■□□□□ 0.09
LINC00963-211ENST00000608369 NSD3Q9BZ95 1437 aa15.6■□□□□ 0.09
LINC00963-211ENST00000608369 CDCA8Q53HL2 280 aa15.6■□□□□ 0.09
LINC00963-211ENST00000608369 TESK2Q96S53 571 aa15.6■□□□□ 0.09
LINC00963-211ENST00000608369 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
LINC00963-211ENST00000608369 SHANK3Q9BYB0 1731 aa15.6■□□□□ 0.09
LINC00963-211ENST00000608369 MEGF6O75095 1541 aa15.59■□□□□ 0.09
LINC00963-211ENST00000608369 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
LINC00963-211ENST00000608369 CEP350Q5VT06 3117 aa15.58■□□□□ 0.08
LINC00963-211ENST00000608369 TATP17735 454 aaPredicted RBP15.58■□□□□ 0.08
LINC00963-211ENST00000608369 SMARCC1Q92922 1105 aaPredicted RBP15.58■□□□□ 0.08
LINC00963-211ENST00000608369 INSRP06213 1382 aa15.58■□□□□ 0.08
LINC00963-211ENST00000608369 ST20-MTHFSA0A0A6YYL1 179 aa15.57■□□□□ 0.08
LINC00963-211ENST00000608369 MSH5O43196 834 aa15.57■□□□□ 0.08
LINC00963-211ENST00000608369 TMF1P82094 1093 aa15.57■□□□□ 0.08
LINC00963-211ENST00000608369 FLT4P35916 1363 aa15.57■□□□□ 0.08
LINC00963-211ENST00000608369 NBPF6Q5VWK0 638 aa15.56■□□□□ 0.08
LINC00963-211ENST00000608369 COL23A1Q86Y22 540 aaPredicted RBP15.56■□□□□ 0.08
LINC00963-211ENST00000608369 NLGN2Q8NFZ4 835 aa15.56■□□□□ 0.08
LINC00963-211ENST00000608369 NBPF4Q96M43 638 aa15.56■□□□□ 0.08
LINC00963-211ENST00000608369 C5P01031 1676 aa15.56■□□□□ 0.08
LINC00963-211ENST00000608369 PALLDQ8WX93 1383 aa15.54■□□□□ 0.08
LINC00963-211ENST00000608369 FYB1O15117 783 aa15.54■□□□□ 0.08
LINC00963-211ENST00000608369 EIF4G2P78344 907 aaKnown RBP eCLIP15.54■□□□□ 0.081e-7■■■■□ 25.4
LINC00963-211ENST00000608369 PLEKHG2Q9H7P9 1386 aa15.53■□□□□ 0.08
LINC00963-211ENST00000608369 YBX3P16989 372 aaKnown RBP eCLIP15.53■□□□□ 0.089e-8■□□□□ 11.2
LINC00963-211ENST00000608369 KCNQ4P56696 695 aa15.53■□□□□ 0.08
LINC00963-211ENST00000608369 RGPD2P0DJD1 1756 aa15.53■□□□□ 0.08
LINC00963-211ENST00000608369 RRS1Q15050 365 aaKnown RBP15.52■□□□□ 0.08
LINC00963-211ENST00000608369 AK7Q96M32 723 aa15.52■□□□□ 0.08
LINC00963-211ENST00000608369 TAF1LQ8IZX4 1826 aa15.52■□□□□ 0.07
LINC00963-211ENST00000608369 GPBP1L1Q9HC44 474 aaPredicted RBP15.51■□□□□ 0.07
LINC00963-211ENST00000608369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00963-211ENST00000608369 SSFA2P28290 1259 aa15.5■□□□□ 0.07
LINC00963-211ENST00000608369 MPRIPQ6WCQ1 1025 aa15.5■□□□□ 0.07
LINC00963-211ENST00000608369 GGNBP2Q9H3C7 697 aa15.5■□□□□ 0.07
LINC00963-211ENST00000608369 SPG7Q9UQ90 795 aa15.5■□□□□ 0.07
LINC00963-211ENST00000608369 ATP10DQ9P241 1426 aa15.5■□□□□ 0.07
LINC00963-211ENST00000608369 C4BP0C0L5 1744 aa15.49■□□□□ 0.07
LINC00963-211ENST00000608369 NKX1-1Q15270 411 aaPredicted RBP15.49■□□□□ 0.07
LINC00963-211ENST00000608369 IFFO2Q5TF58 517 aa15.49■□□□□ 0.07
LINC00963-211ENST00000608369 KIF20BQ96Q89 1820 aa15.49■□□□□ 0.07
LINC00963-211ENST00000608369 NCAPD2Q15021 1401 aa15.49■□□□□ 0.07
LINC00963-211ENST00000608369 ADCY9O60503 1353 aa15.49■□□□□ 0.07
LINC00963-211ENST00000608369 PKD1L3Q7Z443 1732 aa15.48■□□□□ 0.07
LINC00963-211ENST00000608369 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
LINC00963-211ENST00000608369 CYP27B1O15528 508 aa15.47■□□□□ 0.07
LINC00963-211ENST00000608369 FBLN1P23142 703 aa15.47■□□□□ 0.07
LINC00963-211ENST00000608369 MSL1Q68DK7 614 aa15.47■□□□□ 0.07
LINC00963-211ENST00000608369 USHBP1Q8N6Y0 703 aa15.47■□□□□ 0.07
LINC00963-211ENST00000608369 ITGB4P16144 1822 aa15.45■□□□□ 0.06
LINC00963-211ENST00000608369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.45■□□□□ 0.06
LINC00963-211ENST00000608369 UBR3Q6ZT12 1888 aa15.45■□□□□ 0.06
LINC00963-211ENST00000608369 WASHC2AQ641Q2 1341 aa15.44■□□□□ 0.06
LINC00963-211ENST00000608369 LOC102724428A0A0B4J2F2 783 aa15.44■□□□□ 0.06
LINC00963-211ENST00000608369 HSPA6P17066 643 aa15.44■□□□□ 0.06
LINC00963-211ENST00000608369 SIK1P57059 783 aa15.44■□□□□ 0.06
LINC00963-211ENST00000608369 PIGBQ92521 554 aa15.44■□□□□ 0.06
LINC00963-211ENST00000608369 TMOD3Q9NYL9 352 aa15.44■□□□□ 0.06
LINC00963-211ENST00000608369 IGSF1Q8N6C5 1336 aa15.43■□□□□ 0.06
LINC00963-211ENST00000608369 ANKRD26Q9UPS8 1709 aa15.43■□□□□ 0.06
LINC00963-211ENST00000608369 TOGARAM1Q9Y4F4 1720 aa15.43■□□□□ 0.06
LINC00963-211ENST00000608369 IFNL2Q8IZJ0 200 aa15.42■□□□□ 0.06
LINC00963-211ENST00000608369 MAP2P11137 1827 aaKnown RBP15.41■□□□□ 0.06
LINC00963-211ENST00000608369 HSPA5P11021 654 aaKnown RBP15.41■□□□□ 0.06
LINC00963-211ENST00000608369 ADRA2BP18089 450 aa15.41■□□□□ 0.06
LINC00963-211ENST00000608369 TGFB2P61812 414 aa15.41■□□□□ 0.06
LINC00963-211ENST00000608369 CICQ96RK0 1608 aaPredicted RBP15.41■□□□□ 0.06
LINC00963-211ENST00000608369 ZNF831Q5JPB2 1677 aa15.41■□□□□ 0.06
LINC00963-211ENST00000608369 PHF14O94880 888 aa15.4■□□□□ 0.06
LINC00963-211ENST00000608369 HSP90AB1P08238 724 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms