RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 BTAF1O14981 1849 aa22.2■■□□□ 1.14
HDDC2-203ENST00000608284 GIGYF1O75420 1035 aaPredicted RBP22.19■■□□□ 1.14
HDDC2-203ENST00000608284 RAPGEF4Q8WZA2 1011 aa22.19■■□□□ 1.14
HDDC2-203ENST00000608284 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
HDDC2-203ENST00000608284 LTN1O94822 1766 aa22.19■■□□□ 1.14
HDDC2-203ENST00000608284 USP47Q96K76 1375 aa22.18■■□□□ 1.14
HDDC2-203ENST00000608284 CGNL1Q0VF96 1302 aa22.18■■□□□ 1.14
HDDC2-203ENST00000608284 KCNQ4P56696 695 aa22.18■■□□□ 1.14
HDDC2-203ENST00000608284 USP54Q70EL1 1684 aa22.17■■□□□ 1.14
HDDC2-203ENST00000608284 PAPPAQ13219 1627 aa22.17■■□□□ 1.14
HDDC2-203ENST00000608284 ST20-MTHFSA0A0A6YYL1 179 aa22.16■■□□□ 1.14
HDDC2-203ENST00000608284 TATP17735 454 aaPredicted RBP22.15■■□□□ 1.14
HDDC2-203ENST00000608284 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
HDDC2-203ENST00000608284 FLAD1Q8NFF5 587 aa22.14■■□□□ 1.13
HDDC2-203ENST00000608284 CHD4Q14839 1912 aa22.14■■□□□ 1.13
HDDC2-203ENST00000608284 FBLN1P23142 703 aa22.12■■□□□ 1.13
HDDC2-203ENST00000608284 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
HDDC2-203ENST00000608284 NBPF6Q5VWK0 638 aa22.11■■□□□ 1.13
HDDC2-203ENST00000608284 NLGN2Q8NFZ4 835 aa22.11■■□□□ 1.13
HDDC2-203ENST00000608284 NBPF4Q96M43 638 aa22.11■■□□□ 1.13
HDDC2-203ENST00000608284 RTL1A6NKG5 1358 aa22.11■■□□□ 1.13
HDDC2-203ENST00000608284 TMF1P82094 1093 aa22.1■■□□□ 1.13
HDDC2-203ENST00000608284 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
HDDC2-203ENST00000608284 TESK2Q96S53 571 aa22.1■■□□□ 1.13
HDDC2-203ENST00000608284 FAM208AQ9UK61 1670 aaKnown RBP22.1■■□□□ 1.13
HDDC2-203ENST00000608284 CDCA8Q53HL2 280 aa22.08■■□□□ 1.13
HDDC2-203ENST00000608284 USHBP1Q8N6Y0 703 aa22.08■■□□□ 1.13
HDDC2-203ENST00000608284 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
HDDC2-203ENST00000608284 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
HDDC2-203ENST00000608284 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
HDDC2-203ENST00000608284 FYB1O15117 783 aa22.07■■□□□ 1.12
HDDC2-203ENST00000608284 MSL1Q68DK7 614 aa22.07■■□□□ 1.12
HDDC2-203ENST00000608284 NSD2O96028 1365 aa22.07■■□□□ 1.12
HDDC2-203ENST00000608284 MPRIPQ6WCQ1 1025 aa22.06■■□□□ 1.12
HDDC2-203ENST00000608284 SMARCC1Q92922 1105 aaPredicted RBP22.06■■□□□ 1.12
HDDC2-203ENST00000608284 CD2APQ9Y5K6 639 aa22.06■■□□□ 1.12
HDDC2-203ENST00000608284 MEGF6O75095 1541 aa22.05■■□□□ 1.12
HDDC2-203ENST00000608284 AK7Q96M32 723 aa22.04■■□□□ 1.12
HDDC2-203ENST00000608284 QSER1Q2KHR3 1735 aa22.03■■□□□ 1.12
HDDC2-203ENST00000608284 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.123e-9■□□□□ 9
HDDC2-203ENST00000608284 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.12
HDDC2-203ENST00000608284 INSRP06213 1382 aa22.01■■□□□ 1.11
HDDC2-203ENST00000608284 PALLDQ8WX93 1383 aa22.01■■□□□ 1.11
HDDC2-203ENST00000608284 DOT1LQ8TEK3 1739 aa22■■□□□ 1.11
HDDC2-203ENST00000608284 FLT4P35916 1363 aa21.99■■□□□ 1.11
HDDC2-203ENST00000608284 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
HDDC2-203ENST00000608284 GPBP1L1Q9HC44 474 aaPredicted RBP21.99■■□□□ 1.11
HDDC2-203ENST00000608284 SPG7Q9UQ90 795 aa21.99■■□□□ 1.11
HDDC2-203ENST00000608284 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
HDDC2-203ENST00000608284 LY75O60449 1722 aa21.97■■□□□ 1.11
HDDC2-203ENST00000608284 NSD3Q9BZ95 1437 aa21.97■■□□□ 1.11
HDDC2-203ENST00000608284 CYP27B1O15528 508 aa21.95■■□□□ 1.1
HDDC2-203ENST00000608284 PHF14O94880 888 aa21.95■■□□□ 1.1
HDDC2-203ENST00000608284 COL24A1Q17RW2 1714 aa21.94■■□□□ 1.1
HDDC2-203ENST00000608284 GOLGB1Q14789 3259 aaKnown RBP21.93■■□□□ 1.1
HDDC2-203ENST00000608284 PIGBQ92521 554 aa21.93■■□□□ 1.1
HDDC2-203ENST00000608284 TMOD3Q9NYL9 352 aa21.93■■□□□ 1.1
HDDC2-203ENST00000608284 ATP10DQ9P241 1426 aa21.92■■□□□ 1.1
HDDC2-203ENST00000608284 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
HDDC2-203ENST00000608284 SSFA2P28290 1259 aa21.92■■□□□ 1.1
HDDC2-203ENST00000608284 RGPD2P0DJD1 1756 aa21.91■■□□□ 1.1
HDDC2-203ENST00000608284 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
HDDC2-203ENST00000608284 LOC102724428A0A0B4J2F2 783 aa21.9■■□□□ 1.1
HDDC2-203ENST00000608284 SIK1P57059 783 aa21.9■■□□□ 1.1
HDDC2-203ENST00000608284 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
HDDC2-203ENST00000608284 ZNF526Q8TF50 670 aaPredicted RBP21.9■■□□□ 1.1
HDDC2-203ENST00000608284 EMILIN1Q9Y6C2 1016 aa21.9■■□□□ 1.1
HDDC2-203ENST00000608284 IGSF1Q8N6C5 1336 aa21.89■■□□□ 1.1
HDDC2-203ENST00000608284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.09
HDDC2-203ENST00000608284 ATP6V1AP38606 617 aa21.88■■□□□ 1.09
HDDC2-203ENST00000608284 IFFO2Q5TF58 517 aa21.88■■□□□ 1.09
HDDC2-203ENST00000608284 SHANK3Q9BYB0 1731 aa21.88■■□□□ 1.09
HDDC2-203ENST00000608284 IFNL2Q8IZJ0 200 aa21.87■■□□□ 1.09
HDDC2-203ENST00000608284 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
HDDC2-203ENST00000608284 C5P01031 1676 aa21.86■■□□□ 1.09
HDDC2-203ENST00000608284 GNPATO15228 680 aa21.86■■□□□ 1.09
HDDC2-203ENST00000608284 CARD14Q9BXL6 1004 aa21.85■■□□□ 1.09
HDDC2-203ENST00000608284 WWC3Q9ULE0 1092 aa21.85■■□□□ 1.09
HDDC2-203ENST00000608284 LINC00116Q8NCU8 138 aa21.84■■□□□ 1.09
HDDC2-203ENST00000608284 EYA1Q99502 592 aa21.84■■□□□ 1.09
HDDC2-203ENST00000608284 HSPA6P17066 643 aa21.83■■□□□ 1.09
HDDC2-203ENST00000608284 TRAPPC3LQ5T215 181 aa21.83■■□□□ 1.09
HDDC2-203ENST00000608284 ASAP1Q9ULH1 1129 aa21.83■■□□□ 1.09
HDDC2-203ENST00000608284 PHKG2P15735 406 aa21.82■■□□□ 1.08
HDDC2-203ENST00000608284 SMIM5Q71RC9 77 aa21.82■■□□□ 1.08
HDDC2-203ENST00000608284 NLGN1Q8N2Q7 840 aa21.82■■□□□ 1.08
HDDC2-203ENST00000608284 RTCBQ9Y3I0 505 aaKnown RBP21.82■■□□□ 1.08
HDDC2-203ENST00000608284 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
HDDC2-203ENST00000608284 AMIGO3Q86WK7 504 aa21.81■■□□□ 1.08
HDDC2-203ENST00000608284 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
HDDC2-203ENST00000608284 MMP10P09238 476 aa21.8■■□□□ 1.08
HDDC2-203ENST00000608284 POLR3GLQ9BT43 218 aa21.8■■□□□ 1.08
HDDC2-203ENST00000608284 TGFB2P61812 414 aa21.79■■□□□ 1.08
HDDC2-203ENST00000608284 ITPK1Q13572 414 aa21.78■■□□□ 1.08
HDDC2-203ENST00000608284 RBM42Q9BTD8 480 aaKnown RBP21.78■■□□□ 1.08
HDDC2-203ENST00000608284 ATG3Q9NT62 314 aa21.78■■□□□ 1.08
HDDC2-203ENST00000608284 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
HDDC2-203ENST00000608284 ADCY9O60503 1353 aa21.77■■□□□ 1.08
HDDC2-203ENST00000608284 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.08
HDDC2-203ENST00000608284 CCDC87Q9NVE4 849 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms