RNA–Protein interactions for RNA: ENST00000601267.5

C19orf48-213, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 782 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-213ENST00000601267 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
C19orf48-213ENST00000601267 IP6K1Q92551 441 aa17.32■□□□□ 0.36
C19orf48-213ENST00000601267 MSH5O43196 834 aa17.31■□□□□ 0.36
C19orf48-213ENST00000601267 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
C19orf48-213ENST00000601267 GIGYF1O75420 1035 aaPredicted RBP17.3■□□□□ 0.36
C19orf48-213ENST00000601267 NLGN2Q8NFZ4 835 aa17.3■□□□□ 0.36
C19orf48-213ENST00000601267 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
C19orf48-213ENST00000601267 AMPHP49418 695 aa17.29■□□□□ 0.36
C19orf48-213ENST00000601267 RGPD2P0DJD1 1756 aa17.29■□□□□ 0.36
C19orf48-213ENST00000601267 LY75O60449 1722 aa17.28■□□□□ 0.36
C19orf48-213ENST00000601267 COG3Q96JB2 828 aa17.28■□□□□ 0.36
C19orf48-213ENST00000601267 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
C19orf48-213ENST00000601267 GOLGB1Q14789 3259 aaKnown RBP17.28■□□□□ 0.36
C19orf48-213ENST00000601267 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.36
C19orf48-213ENST00000601267 SHANK3Q9BYB0 1731 aa17.27■□□□□ 0.36
C19orf48-213ENST00000601267 MAP3K19Q56UN5 1328 aa17.27■□□□□ 0.36
C19orf48-213ENST00000601267 FBLN1P23142 703 aa17.27■□□□□ 0.36
C19orf48-213ENST00000601267 HOXC9P31274 260 aa17.27■□□□□ 0.36
C19orf48-213ENST00000601267 NSD2O96028 1365 aa17.27■□□□□ 0.35
C19orf48-213ENST00000601267 MEGF6O75095 1541 aa17.26■□□□□ 0.35
C19orf48-213ENST00000601267 ZCRB1Q8TBF4 217 aaKnown RBP17.26■□□□□ 0.35
C19orf48-213ENST00000601267 MSL1Q68DK7 614 aa17.25■□□□□ 0.35
C19orf48-213ENST00000601267 USHBP1Q8N6Y0 703 aa17.24■□□□□ 0.35
C19orf48-213ENST00000601267 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
C19orf48-213ENST00000601267 USP47Q96K76 1375 aa17.24■□□□□ 0.35
C19orf48-213ENST00000601267 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.35not detected■□□□□ 10.6
C19orf48-213ENST00000601267 COL23A1Q86Y22 540 aaPredicted RBP17.22■□□□□ 0.35
C19orf48-213ENST00000601267 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
C19orf48-213ENST00000601267 C5P01031 1676 aa17.2■□□□□ 0.34
C19orf48-213ENST00000601267 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
C19orf48-213ENST00000601267 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
C19orf48-213ENST00000601267 RAPGEF4Q8WZA2 1011 aa17.2■□□□□ 0.34
C19orf48-213ENST00000601267 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
C19orf48-213ENST00000601267 PUS7Q96PZ0 661 aaKnown RBP17.2■□□□□ 0.34
C19orf48-213ENST00000601267 SMG6Q86US8 1419 aaKnown RBP17.2■□□□□ 0.34
C19orf48-213ENST00000601267 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
C19orf48-213ENST00000601267 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
C19orf48-213ENST00000601267 GGNBP2Q9H3C7 697 aa17.18■□□□□ 0.34
C19orf48-213ENST00000601267 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
C19orf48-213ENST00000601267 TESK2Q96S53 571 aa17.17■□□□□ 0.34
C19orf48-213ENST00000601267 ATP10DQ9P241 1426 aa17.16■□□□□ 0.34
C19orf48-213ENST00000601267 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
C19orf48-213ENST00000601267 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
C19orf48-213ENST00000601267 WWC3Q9ULE0 1092 aa17.15■□□□□ 0.34
C19orf48-213ENST00000601267 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
C19orf48-213ENST00000601267 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
C19orf48-213ENST00000601267 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
C19orf48-213ENST00000601267 ZNF526Q8TF50 670 aaPredicted RBP17.14■□□□□ 0.33
C19orf48-213ENST00000601267 TAF1LQ8IZX4 1826 aa17.14■□□□□ 0.33
C19orf48-213ENST00000601267 PHF14O94880 888 aa17.13■□□□□ 0.33
C19orf48-213ENST00000601267 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
C19orf48-213ENST00000601267 AK7Q96M32 723 aa17.13■□□□□ 0.33
C19orf48-213ENST00000601267 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
C19orf48-213ENST00000601267 FYB1O15117 783 aa17.12■□□□□ 0.33
C19orf48-213ENST00000601267 FLAD1Q8NFF5 587 aa17.12■□□□□ 0.33
C19orf48-213ENST00000601267 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
C19orf48-213ENST00000601267 CD2APQ9Y5K6 639 aa17.12■□□□□ 0.33
C19orf48-213ENST00000601267 CEP350Q5VT06 3117 aa17.12■□□□□ 0.33
C19orf48-213ENST00000601267 C4BP0C0L5 1744 aa17.12■□□□□ 0.33
C19orf48-213ENST00000601267 TOGARAM1Q9Y4F4 1720 aa17.12■□□□□ 0.33
C19orf48-213ENST00000601267 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
C19orf48-213ENST00000601267 ITGB4P16144 1822 aa17.1■□□□□ 0.33
C19orf48-213ENST00000601267 SMIM5Q71RC9 77 aa17.1■□□□□ 0.33
C19orf48-213ENST00000601267 INSRP06213 1382 aa17.1■□□□□ 0.33
C19orf48-213ENST00000601267 FLT4P35916 1363 aa17.1■□□□□ 0.33
C19orf48-213ENST00000601267 CYP27B1O15528 508 aa17.09■□□□□ 0.33
C19orf48-213ENST00000601267 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
C19orf48-213ENST00000601267 TMF1P82094 1093 aa17.09■□□□□ 0.33
C19orf48-213ENST00000601267 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.32
C19orf48-213ENST00000601267 IFFO2Q5TF58 517 aa17.08■□□□□ 0.32
C19orf48-213ENST00000601267 AMIGO3Q86WK7 504 aa17.08■□□□□ 0.32
C19orf48-213ENST00000601267 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
C19orf48-213ENST00000601267 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
C19orf48-213ENST00000601267 UBR3Q6ZT12 1888 aa17.07■□□□□ 0.32
C19orf48-213ENST00000601267 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
C19orf48-213ENST00000601267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
C19orf48-213ENST00000601267 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
C19orf48-213ENST00000601267 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
C19orf48-213ENST00000601267 ADCY9O60503 1353 aa17.05■□□□□ 0.32
C19orf48-213ENST00000601267 PIGBQ92521 554 aa17.05■□□□□ 0.32
C19orf48-213ENST00000601267 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
C19orf48-213ENST00000601267 KIF24Q5T7B8 1368 aa17.03■□□□□ 0.32
C19orf48-213ENST00000601267 LINC00116Q8NCU8 138 aa17.03■□□□□ 0.32
C19orf48-213ENST00000601267 LOC102724428A0A0B4J2F2 783 aa17.02■□□□□ 0.32
C19orf48-213ENST00000601267 GNPATO15228 680 aa17.02■□□□□ 0.32
C19orf48-213ENST00000601267 HSPA6P17066 643 aa17.02■□□□□ 0.32
C19orf48-213ENST00000601267 SIK1P57059 783 aa17.02■□□□□ 0.32
C19orf48-213ENST00000601267 TMOD3Q9NYL9 352 aa17.02■□□□□ 0.32
C19orf48-213ENST00000601267 SPG7Q9UQ90 795 aa17.02■□□□□ 0.32
C19orf48-213ENST00000601267 SSFA2P28290 1259 aa17.01■□□□□ 0.31
C19orf48-213ENST00000601267 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
C19orf48-213ENST00000601267 CDCA8Q53HL2 280 aa17■□□□□ 0.31
C19orf48-213ENST00000601267 ATP6V1AP38606 617 aa16.99■□□□□ 0.31
C19orf48-213ENST00000601267 ITPK1Q13572 414 aa16.99■□□□□ 0.31
C19orf48-213ENST00000601267 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
C19orf48-213ENST00000601267 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
C19orf48-213ENST00000601267 CARD14Q9BXL6 1004 aa16.98■□□□□ 0.31
C19orf48-213ENST00000601267 ANKRD26Q9UPS8 1709 aa16.97■□□□□ 0.31
C19orf48-213ENST00000601267 MMP10P09238 476 aa16.97■□□□□ 0.31
C19orf48-213ENST00000601267 EYA1Q99502 592 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms