RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 MEGF6O75095 1541 aa19■□□□□ 0.63
XRCC1-207ENST00000598165 EN1Q05925 392 aaPredicted RBP18.98■□□□□ 0.63
XRCC1-207ENST00000598165 MARCH10Q8NA82 808 aaPredicted RBP18.98■□□□□ 0.63
XRCC1-207ENST00000598165 ZCRB1Q8TBF4 217 aaKnown RBP18.98■□□□□ 0.63
XRCC1-207ENST00000598165 OVOS2A0A0G2JMS6 1433 aa18.98■□□□□ 0.63
XRCC1-207ENST00000598165 SULT6B1Q6IMI4 303 aa18.96■□□□□ 0.63
XRCC1-207ENST00000598165 DDX54Q8TDD1 881 aaKnown RBP18.96■□□□□ 0.63
XRCC1-207ENST00000598165 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
XRCC1-207ENST00000598165 RGPD1P0DJD0 1748 aa18.95■□□□□ 0.62
XRCC1-207ENST00000598165 PRKRIP1Q9H875 184 aaPredicted RBP18.95■□□□□ 0.62
XRCC1-207ENST00000598165 U2SURPO15042 1029 aaKnown RBP18.94■□□□□ 0.62
XRCC1-207ENST00000598165 AEBP1Q8IUX7 1158 aa18.94■□□□□ 0.62
XRCC1-207ENST00000598165 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
XRCC1-207ENST00000598165 MYBBP1AQ9BQG0 1328 aaKnown RBP18.94■□□□□ 0.62
XRCC1-207ENST00000598165 SPG7Q9UQ90 795 aa18.93■□□□□ 0.62
XRCC1-207ENST00000598165 TNS1Q9HBL0 1735 aaKnown RBP18.93■□□□□ 0.62
XRCC1-207ENST00000598165 KDRP35968 1356 aa18.93■□□□□ 0.62
XRCC1-207ENST00000598165 R3HDM1Q15032 1099 aaKnown RBP18.92■□□□□ 0.62
XRCC1-207ENST00000598165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.92■□□□□ 0.62
XRCC1-207ENST00000598165 PCDH11XQ9BZA7 1347 aa18.92■□□□□ 0.62
XRCC1-207ENST00000598165 PCDH11YQ9BZA8 1340 aa18.92■□□□□ 0.62
XRCC1-207ENST00000598165 BCL9O00512 1426 aa18.91■□□□□ 0.62
XRCC1-207ENST00000598165 TRIM37O94972 964 aa18.91■□□□□ 0.62
XRCC1-207ENST00000598165 HMOX1P09601 288 aa18.91■□□□□ 0.62
XRCC1-207ENST00000598165 PLEKHG2Q9H7P9 1386 aa18.91■□□□□ 0.62
XRCC1-207ENST00000598165 EZH2Q15910 746 aaKnown RBP18.89■□□□□ 0.61
XRCC1-207ENST00000598165 PLEKHO1Q53GL0 409 aaPredicted RBP18.89■□□□□ 0.61
XRCC1-207ENST00000598165 CYP27B1O15528 508 aa18.88■□□□□ 0.61
XRCC1-207ENST00000598165 AMOTQ4VCS5 1084 aa18.88■□□□□ 0.61
XRCC1-207ENST00000598165 ANP32CO43423 234 aa18.87■□□□□ 0.61
XRCC1-207ENST00000598165 U2AF1L5P0DN76 240 aaPredicted RBP18.87■□□□□ 0.61
XRCC1-207ENST00000598165 U2AF1Q01081 240 aaKnown RBP eCLIP18.87■□□□□ 0.61
XRCC1-207ENST00000598165 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
XRCC1-207ENST00000598165 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
XRCC1-207ENST00000598165 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
XRCC1-207ENST00000598165 ACSBG1Q96GR2 724 aa18.86■□□□□ 0.61
XRCC1-207ENST00000598165 BCL11BQ9C0K0 894 aaPredicted RBP18.86■□□□□ 0.61
XRCC1-207ENST00000598165 CAMKK2Q96RR4 588 aa18.85■□□□□ 0.61
XRCC1-207ENST00000598165 APBA3O96018 575 aa18.84■□□□□ 0.61
XRCC1-207ENST00000598165 PHKG2P15735 406 aa18.84■□□□□ 0.61
XRCC1-207ENST00000598165 ZNF530Q6P9A1 599 aaPredicted RBP18.84■□□□□ 0.61
XRCC1-207ENST00000598165 KCNQ2O43526 872 aa18.83■□□□□ 0.6
XRCC1-207ENST00000598165 SBF2Q86WG5 1849 aa18.82■□□□□ 0.6
XRCC1-207ENST00000598165 FCHSD2O94868 740 aa18.82■□□□□ 0.6
XRCC1-207ENST00000598165 NKX1-1Q15270 411 aaPredicted RBP18.82■□□□□ 0.6
XRCC1-207ENST00000598165 C1orf141Q5JVX7 400 aa18.82■□□□□ 0.6
XRCC1-207ENST00000598165 PTF1AQ7RTS3 328 aa18.82■□□□□ 0.6
XRCC1-207ENST00000598165 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
XRCC1-207ENST00000598165 RSPH6AQ9H0K4 717 aa18.82■□□□□ 0.6
XRCC1-207ENST00000598165 PRKAR2BP31323 418 aa18.81■□□□□ 0.6
XRCC1-207ENST00000598165 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
XRCC1-207ENST00000598165 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
XRCC1-207ENST00000598165 KAT6BQ8WYB5 2073 aa18.8■□□□□ 0.6
XRCC1-207ENST00000598165 MTHFSDQ2M296 383 aaKnown RBP18.79■□□□□ 0.6
XRCC1-207ENST00000598165 NHSQ6T4R5 1651 aa18.79■□□□□ 0.6
XRCC1-207ENST00000598165 AKAP4Q5JQC9 854 aa18.78■□□□□ 0.6
XRCC1-207ENST00000598165 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
XRCC1-207ENST00000598165 RREB1Q92766 1687 aa18.78■□□□□ 0.6
XRCC1-207ENST00000598165 PLSCR1O15162 318 aa18.77■□□□□ 0.6
XRCC1-207ENST00000598165 NEFMP07197 916 aa18.77■□□□□ 0.6
XRCC1-207ENST00000598165 WDR43Q15061 677 aaKnown RBP eCLIP18.77■□□□□ 0.6
XRCC1-207ENST00000598165 DCAF5Q96JK2 942 aa18.77■□□□□ 0.6
XRCC1-207ENST00000598165 PNNQ9H307 717 aaKnown RBP18.77■□□□□ 0.6
XRCC1-207ENST00000598165 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.59
XRCC1-207ENST00000598165 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
XRCC1-207ENST00000598165 PHACTR3Q96KR7 559 aa18.76■□□□□ 0.59
XRCC1-207ENST00000598165 NUP188Q5SRE5 1749 aa18.76■□□□□ 0.59
XRCC1-207ENST00000598165 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
XRCC1-207ENST00000598165 TMOD3Q9NYL9 352 aa18.73■□□□□ 0.59
XRCC1-207ENST00000598165 KDM6AO15550 1401 aaPredicted RBP18.73■□□□□ 0.59
XRCC1-207ENST00000598165 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
XRCC1-207ENST00000598165 TOGARAM1Q9Y4F4 1720 aa18.72■□□□□ 0.59
XRCC1-207ENST00000598165 PIGBQ92521 554 aa18.72■□□□□ 0.59
XRCC1-207ENST00000598165 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
XRCC1-207ENST00000598165 BTAF1O14981 1849 aa18.72■□□□□ 0.59
XRCC1-207ENST00000598165 GNAT3A8MTJ3 354 aa18.71■□□□□ 0.59
XRCC1-207ENST00000598165 CABP4P57796 275 aa18.71■□□□□ 0.59
XRCC1-207ENST00000598165 CCDC184Q52MB2 194 aa18.71■□□□□ 0.59
XRCC1-207ENST00000598165 MRS2Q9HD23 443 aa18.71■□□□□ 0.59
XRCC1-207ENST00000598165 MAP3K5Q99683 1374 aa18.7■□□□□ 0.58
XRCC1-207ENST00000598165 ADAMTS8Q9UP79 889 aa18.7■□□□□ 0.58
XRCC1-207ENST00000598165 RNMTO43148 476 aaKnown RBP18.69■□□□□ 0.58
XRCC1-207ENST00000598165 TXNRD1Q16881 649 aa18.69■□□□□ 0.58
XRCC1-207ENST00000598165 NBPF14Q5TI25 921 aa18.69■□□□□ 0.58
XRCC1-207ENST00000598165 LGR6Q9HBX8 967 aa18.69■□□□□ 0.58
XRCC1-207ENST00000598165 RGPD3A6NKT7 1758 aaPredicted RBP18.68■□□□□ 0.58
XRCC1-207ENST00000598165 RGPD4Q7Z3J3 1758 aa18.68■□□□□ 0.58
XRCC1-207ENST00000598165 PROM2Q8N271 834 aa18.68■□□□□ 0.58
XRCC1-207ENST00000598165 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
XRCC1-207ENST00000598165 ITGB4P16144 1822 aa18.67■□□□□ 0.58
XRCC1-207ENST00000598165 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
XRCC1-207ENST00000598165 NFATC2IPQ8NCF5 419 aa18.67■□□□□ 0.58
XRCC1-207ENST00000598165 RTF1Q92541 710 aaKnown RBP18.67■□□□□ 0.58
XRCC1-207ENST00000598165 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
XRCC1-207ENST00000598165 DIEXFQ68CQ4 756 aaKnown RBP18.66■□□□□ 0.58
XRCC1-207ENST00000598165 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
XRCC1-207ENST00000598165 SLC52A2Q9HAB3 445 aa18.66■□□□□ 0.58
XRCC1-207ENST00000598165 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
XRCC1-207ENST00000598165 HTATSF1O43719 755 aaKnown RBP18.65■□□□□ 0.58
XRCC1-207ENST00000598165 SLC27A3Q5K4L6 730 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms