RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 NFE2L2Q16236 605 aa19.03■□□□□ 0.64
IRF3-219ENST00000597636 THUMPD2Q9BTF0 503 aaKnown RBP19.03■□□□□ 0.64
IRF3-219ENST00000597636 API5Q9BZZ5 524 aaKnown RBP19.03■□□□□ 0.64
IRF3-219ENST00000597636 LRRC7Q96NW7 1537 aa19.03■□□□□ 0.64
IRF3-219ENST00000597636 C16orf71Q8IYS4 520 aaPredicted RBP19.03■□□□□ 0.64
IRF3-219ENST00000597636 SYCE3A1L190 88 aa19.02■□□□□ 0.64
IRF3-219ENST00000597636 IFT57Q9NWB7 429 aa19.02■□□□□ 0.64
IRF3-219ENST00000597636 SASS6Q6UVJ0 657 aa19.02■□□□□ 0.63
IRF3-219ENST00000597636 PIK3C2BO00750 1634 aa19.01■□□□□ 0.63
IRF3-219ENST00000597636 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
IRF3-219ENST00000597636 ATAD2Q6PL18 1390 aa19.01■□□□□ 0.63
IRF3-219ENST00000597636 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
IRF3-219ENST00000597636 ZNF853P0CG23 659 aa19■□□□□ 0.63
IRF3-219ENST00000597636 TWISTNBQ3B726 338 aaPredicted RBP19■□□□□ 0.63
IRF3-219ENST00000597636 MBIPQ9NS73 344 aa19■□□□□ 0.63
IRF3-219ENST00000597636 NSFL1CQ9UNZ2 370 aaKnown RBP19■□□□□ 0.63
IRF3-219ENST00000597636 ZFYVE9O95405 1425 aa19■□□□□ 0.63
IRF3-219ENST00000597636 SDSP20132 328 aa19■□□□□ 0.63
IRF3-219ENST00000597636 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
IRF3-219ENST00000597636 CASC1Q6TDU7 716 aa19■□□□□ 0.63
IRF3-219ENST00000597636 ANKRD26Q9UPS8 1709 aa19■□□□□ 0.63
IRF3-219ENST00000597636 CD163L1Q9NR16 1453 aa18.99■□□□□ 0.63
IRF3-219ENST00000597636 MBD3O95983 291 aa18.99■□□□□ 0.63
IRF3-219ENST00000597636 CHAMP1Q96JM3 812 aa18.99■□□□□ 0.63
IRF3-219ENST00000597636 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
IRF3-219ENST00000597636 WAPLQ7Z5K2 1190 aa18.98■□□□□ 0.63
IRF3-219ENST00000597636 OTUD7AQ8TE49 926 aaPredicted RBP18.98■□□□□ 0.63
IRF3-219ENST00000597636 TNRQ92752 1358 aa18.97■□□□□ 0.63
IRF3-219ENST00000597636 NEXMIFQ5QGS0 1516 aa18.97■□□□□ 0.63
IRF3-219ENST00000597636 REC8O95072 547 aa18.97■□□□□ 0.63
IRF3-219ENST00000597636 C8orf58Q8NAV2 365 aa18.97■□□□□ 0.63
IRF3-219ENST00000597636 HDGFL2Q7Z4V5 671 aaPredicted RBP18.97■□□□□ 0.63
IRF3-219ENST00000597636 ANKRD44Q8N8A2 993 aa18.97■□□□□ 0.63
IRF3-219ENST00000597636 SMAP1Q8IYB5 467 aaPredicted RBP18.96■□□□□ 0.63
IRF3-219ENST00000597636 PRAM1Q96QH2 718 aa18.96■□□□□ 0.63
IRF3-219ENST00000597636 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
IRF3-219ENST00000597636 HMOX1P09601 288 aa18.96■□□□□ 0.63
IRF3-219ENST00000597636 RNF214Q8ND24 703 aa18.96■□□□□ 0.63
IRF3-219ENST00000597636 TMEM131LA2VDJ0 1609 aa18.96■□□□□ 0.63
IRF3-219ENST00000597636 POLKQ9UBT6 870 aa18.95■□□□□ 0.62
IRF3-219ENST00000597636 KNDC1Q76NI1 1749 aa18.95■□□□□ 0.62
IRF3-219ENST00000597636 LTKP29376 864 aa18.94■□□□□ 0.62
IRF3-219ENST00000597636 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
IRF3-219ENST00000597636 A2ML1A8K2U0 1454 aa18.94■□□□□ 0.62
IRF3-219ENST00000597636 RIMS2Q9UQ26 1411 aa18.94■□□□□ 0.62
IRF3-219ENST00000597636 ERC2O15083 957 aa18.93■□□□□ 0.62
IRF3-219ENST00000597636 FOXD4L5Q5VV16 416 aaPredicted RBP18.93■□□□□ 0.62
IRF3-219ENST00000597636 FOXD4L4Q8WXT5 416 aaPredicted RBP18.93■□□□□ 0.62
IRF3-219ENST00000597636 PTMAP06454 111 aaKnown RBP18.93■□□□□ 0.62
IRF3-219ENST00000597636 FBLN1P23142 703 aa18.93■□□□□ 0.62
IRF3-219ENST00000597636 KIAA2012Q0VF49 1180 aa18.93■□□□□ 0.62
IRF3-219ENST00000597636 TXNDC2Q86VQ3 553 aa18.93■□□□□ 0.62
IRF3-219ENST00000597636 TSPY26PQ9H489 355 aa18.93■□□□□ 0.62
IRF3-219ENST00000597636 ATP10DQ9P241 1426 aa18.93■□□□□ 0.62
IRF3-219ENST00000597636 BRD1O95696 1058 aa18.92■□□□□ 0.62
IRF3-219ENST00000597636 SMARCA5O60264 1052 aaPredicted RBP18.92■□□□□ 0.62
IRF3-219ENST00000597636 TMX3Q96JJ7 454 aa18.92■□□□□ 0.62
IRF3-219ENST00000597636 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
IRF3-219ENST00000597636 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.91■□□□□ 0.62
IRF3-219ENST00000597636 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
IRF3-219ENST00000597636 NEK4P51957 841 aa18.91■□□□□ 0.62
IRF3-219ENST00000597636 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
IRF3-219ENST00000597636 LMOD3Q0VAK6 560 aa18.9■□□□□ 0.62
IRF3-219ENST00000597636 ARID3AQ99856 593 aa18.9■□□□□ 0.62
IRF3-219ENST00000597636 PTPRMP28827 1452 aa18.9■□□□□ 0.62
IRF3-219ENST00000597636 MCM2P49736 904 aa18.9■□□□□ 0.62
IRF3-219ENST00000597636 MYRIPQ8NFW9 859 aa18.9■□□□□ 0.62
IRF3-219ENST00000597636 SYAP1Q96A49 352 aaPredicted RBP18.9■□□□□ 0.62
IRF3-219ENST00000597636 APBB1O00213 710 aa18.89■□□□□ 0.61
IRF3-219ENST00000597636 CCDC94Q9BW85 323 aaPredicted RBP18.89■□□□□ 0.61
IRF3-219ENST00000597636 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.61
IRF3-219ENST00000597636 CUL4AQ13619 759 aa18.88■□□□□ 0.61
IRF3-219ENST00000597636 YTHDC2Q9H6S0 1430 aaKnown RBP18.88■□□□□ 0.61
IRF3-219ENST00000597636 CDK19Q9BWU1 502 aa18.88■□□□□ 0.61
IRF3-219ENST00000597636 IL13P35225 146 aa18.87■□□□□ 0.61
IRF3-219ENST00000597636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.87■□□□□ 0.61
IRF3-219ENST00000597636 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
IRF3-219ENST00000597636 METP08581 1390 aa18.86■□□□□ 0.61
IRF3-219ENST00000597636 PHF14O94880 888 aa18.86■□□□□ 0.61
IRF3-219ENST00000597636 DNTTIP2Q5QJE6 756 aaKnown RBP18.86■□□□□ 0.61
IRF3-219ENST00000597636 INTS4Q96HW7 963 aaKnown RBP18.86■□□□□ 0.61
IRF3-219ENST00000597636 PRIMPOLQ96LW4 560 aa18.86■□□□□ 0.61
IRF3-219ENST00000597636 OSBPL3Q9H4L5 887 aa18.86■□□□□ 0.61
IRF3-219ENST00000597636 FAM83GA6ND36 823 aa18.85■□□□□ 0.61
IRF3-219ENST00000597636 RBM33Q96EV2 1170 aaKnown RBP18.85■□□□□ 0.61
IRF3-219ENST00000597636 KIF20BQ96Q89 1820 aa18.85■□□□□ 0.61
IRF3-219ENST00000597636 RGS12O14924 1447 aa18.84■□□□□ 0.61
IRF3-219ENST00000597636 UVSSAQ2YD98 709 aa18.84■□□□□ 0.61
IRF3-219ENST00000597636 FAM184AQ8NB25 1140 aa18.84■□□□□ 0.61
IRF3-219ENST00000597636 PIBF1Q8WXW3 757 aa18.84■□□□□ 0.61
IRF3-219ENST00000597636 EMILIN1Q9Y6C2 1016 aa18.84■□□□□ 0.61
IRF3-219ENST00000597636 HMGN5P82970 282 aaKnown RBP18.83■□□□□ 0.61
IRF3-219ENST00000597636 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.61
IRF3-219ENST00000597636 PDE1AP54750 535 aa18.83■□□□□ 0.6
IRF3-219ENST00000597636 MEIS3Q99687 375 aa18.83■□□□□ 0.6
IRF3-219ENST00000597636 NCKAP5LQ9HCH0 1330 aa18.83■□□□□ 0.6
IRF3-219ENST00000597636 DCTN1Q14203 1278 aa18.83■□□□□ 0.6
IRF3-219ENST00000597636 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.6
IRF3-219ENST00000597636 MSH6P52701 1360 aa18.82■□□□□ 0.6
IRF3-219ENST00000597636 TMEM2Q9UHN6 1383 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms