RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ANKRD36BQ8N2N9 1353 aa14.79□□□□□ -0.04
CHMP2A-202ENST00000596708 SGIP1Q9BQI5 828 aa14.79□□□□□ -0.04
CHMP2A-202ENST00000596708 GGNBP2Q9H3C7 697 aa14.79□□□□□ -0.04
CHMP2A-202ENST00000596708 FYB1O15117 783 aa14.77□□□□□ -0.05
CHMP2A-202ENST00000596708 KCNQ4P56696 695 aa14.77□□□□□ -0.05
CHMP2A-202ENST00000596708 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
CHMP2A-202ENST00000596708 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
CHMP2A-202ENST00000596708 USHBP1Q8N6Y0 703 aa14.76□□□□□ -0.05
CHMP2A-202ENST00000596708 SLC16A10Q8TF71 515 aa14.76□□□□□ -0.05
CHMP2A-202ENST00000596708 TFCP2L1Q9NZI6 479 aa14.76□□□□□ -0.05
CHMP2A-202ENST00000596708 MAP2P11137 1827 aaKnown RBP14.76□□□□□ -0.05
CHMP2A-202ENST00000596708 USP47Q96K76 1375 aa14.75□□□□□ -0.05
CHMP2A-202ENST00000596708 POLD1P28340 1107 aa14.75□□□□□ -0.05
CHMP2A-202ENST00000596708 NBPF6Q5VWK0 638 aa14.75□□□□□ -0.05
CHMP2A-202ENST00000596708 RAPGEF4Q8WZA2 1011 aa14.75□□□□□ -0.05
CHMP2A-202ENST00000596708 NBPF4Q96M43 638 aa14.75□□□□□ -0.05
CHMP2A-202ENST00000596708 MEGF6O75095 1541 aa14.75□□□□□ -0.05
CHMP2A-202ENST00000596708 SMG6Q86US8 1419 aaKnown RBP14.75□□□□□ -0.05
CHMP2A-202ENST00000596708 RTL1A6NKG5 1358 aa14.74□□□□□ -0.05
CHMP2A-202ENST00000596708 TATP17735 454 aaPredicted RBP14.74□□□□□ -0.05
CHMP2A-202ENST00000596708 COL24A1Q17RW2 1714 aa14.74□□□□□ -0.05
CHMP2A-202ENST00000596708 ITGB4P16144 1822 aa14.73□□□□□ -0.05
CHMP2A-202ENST00000596708 PNPLA7Q6ZV29 1317 aa14.73□□□□□ -0.05
CHMP2A-202ENST00000596708 GPR162Q16538 588 aa14.73□□□□□ -0.05
CHMP2A-202ENST00000596708 CDCA8Q53HL2 280 aa14.73□□□□□ -0.05
CHMP2A-202ENST00000596708 CCNL1Q9UK58 526 aaPredicted RBP14.73□□□□□ -0.05
CHMP2A-202ENST00000596708 CGNL1Q0VF96 1302 aa14.72□□□□□ -0.05
CHMP2A-202ENST00000596708 TAF1LQ8IZX4 1826 aa14.72□□□□□ -0.05
CHMP2A-202ENST00000596708 MSH5O43196 834 aa14.72□□□□□ -0.05
CHMP2A-202ENST00000596708 TRIM26Q12899 539 aaPredicted RBP14.72□□□□□ -0.05
CHMP2A-202ENST00000596708 HSP90AB2PQ58FF8 381 aa14.72□□□□□ -0.05
CHMP2A-202ENST00000596708 ZNF784Q8NCA9 323 aaPredicted RBP14.72□□□□□ -0.05
CHMP2A-202ENST00000596708 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.05
CHMP2A-202ENST00000596708 NSD2O96028 1365 aa14.71□□□□□ -0.06
CHMP2A-202ENST00000596708 MAP3K5Q99683 1374 aa14.71□□□□□ -0.06
CHMP2A-202ENST00000596708 C5P01031 1676 aa14.7□□□□□ -0.06
CHMP2A-202ENST00000596708 INSRP06213 1382 aa14.7□□□□□ -0.06
CHMP2A-202ENST00000596708 FLT4P35916 1363 aa14.69□□□□□ -0.06
CHMP2A-202ENST00000596708 PCDH11XQ9BZA7 1347 aa14.68□□□□□ -0.06
CHMP2A-202ENST00000596708 PCDH11YQ9BZA8 1340 aa14.68□□□□□ -0.06
CHMP2A-202ENST00000596708 PPM1GO15355 546 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-202ENST00000596708 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
CHMP2A-202ENST00000596708 COL23A1Q86Y22 540 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-202ENST00000596708 UTRNP46939 3433 aa14.67□□□□□ -0.06
CHMP2A-202ENST00000596708 KIF24Q5T7B8 1368 aa14.66□□□□□ -0.06
CHMP2A-202ENST00000596708 HMGB2P26583 209 aaKnown RBP14.66□□□□□ -0.06
CHMP2A-202ENST00000596708 CARD14Q9BXL6 1004 aa14.66□□□□□ -0.06
CHMP2A-202ENST00000596708 EMILIN1Q9Y6C2 1016 aa14.66□□□□□ -0.06
CHMP2A-202ENST00000596708 NSD3Q9BZ95 1437 aa14.66□□□□□ -0.06
CHMP2A-202ENST00000596708 PKD1L3Q7Z443 1732 aa14.65□□□□□ -0.06
CHMP2A-202ENST00000596708 TOGARAM1Q9Y4F4 1720 aa14.65□□□□□ -0.06
CHMP2A-202ENST00000596708 PALLDQ8WX93 1383 aa14.64□□□□□ -0.07
CHMP2A-202ENST00000596708 CYP27B1O15528 508 aa14.64□□□□□ -0.07
CHMP2A-202ENST00000596708 MSL1Q68DK7 614 aa14.64□□□□□ -0.07
CHMP2A-202ENST00000596708 NLGN2Q8NFZ4 835 aa14.64□□□□□ -0.07
CHMP2A-202ENST00000596708 POLR3GLQ9BT43 218 aa14.64□□□□□ -0.07
CHMP2A-202ENST00000596708 SMARCC1Q92922 1105 aaPredicted RBP14.63□□□□□ -0.07
CHMP2A-202ENST00000596708 UBR3Q6ZT12 1888 aa14.62□□□□□ -0.07
CHMP2A-202ENST00000596708 FLAD1Q8NFF5 587 aa14.62□□□□□ -0.07
CHMP2A-202ENST00000596708 ANKRD26Q9UPS8 1709 aa14.62□□□□□ -0.07
CHMP2A-202ENST00000596708 SPG7Q9UQ90 795 aa14.62□□□□□ -0.07
CHMP2A-202ENST00000596708 C4BP0C0L5 1744 aa14.61□□□□□ -0.07
CHMP2A-202ENST00000596708 PIGBQ92521 554 aa14.6□□□□□ -0.07
CHMP2A-202ENST00000596708 AK7Q96M32 723 aa14.6□□□□□ -0.07
CHMP2A-202ENST00000596708 EYA1Q99502 592 aa14.6□□□□□ -0.07
CHMP2A-202ENST00000596708 TIMELESSQ9UNS1 1208 aa14.6□□□□□ -0.07
CHMP2A-202ENST00000596708 WASHC2AQ641Q2 1341 aa14.6□□□□□ -0.07
CHMP2A-202ENST00000596708 GRIN3BO60391 1043 aa14.59□□□□□ -0.07
CHMP2A-202ENST00000596708 C1QTNF8P60827 252 aa14.59□□□□□ -0.07
CHMP2A-202ENST00000596708 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
CHMP2A-202ENST00000596708 SENP3-EIF4A1A0A087X0R7 540 aa14.58□□□□□ -0.08
CHMP2A-202ENST00000596708 PHF14O94880 888 aa14.58□□□□□ -0.08
CHMP2A-202ENST00000596708 YBX3P16989 372 aaKnown RBP eCLIP14.58□□□□□ -0.084e-13■■□□□ 11.6
CHMP2A-202ENST00000596708 TNNT2P45379 298 aaPredicted RBP14.58□□□□□ -0.08
CHMP2A-202ENST00000596708 NKX1-1Q15270 411 aaPredicted RBP14.58□□□□□ -0.08
CHMP2A-202ENST00000596708 POLKQ9UBT6 870 aa14.58□□□□□ -0.08
CHMP2A-202ENST00000596708 IFNL2Q8IZJ0 200 aa14.57□□□□□ -0.08
CHMP2A-202ENST00000596708 TMOD3Q9NYL9 352 aa14.57□□□□□ -0.08
CHMP2A-202ENST00000596708 NCAPD2Q15021 1401 aa14.57□□□□□ -0.08
CHMP2A-202ENST00000596708 LOC102724428A0A0B4J2F2 783 aa14.56□□□□□ -0.08
CHMP2A-202ENST00000596708 SIK1P57059 783 aa14.56□□□□□ -0.08
CHMP2A-202ENST00000596708 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
CHMP2A-202ENST00000596708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHMP2A-202ENST00000596708 CD2APQ9Y5K6 639 aa14.56□□□□□ -0.08
CHMP2A-202ENST00000596708 GIGYF1O75420 1035 aaPredicted RBP14.55□□□□□ -0.08
CHMP2A-202ENST00000596708 PHKG2P15735 406 aa14.55□□□□□ -0.08
CHMP2A-202ENST00000596708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.54□□□□□ -0.08
CHMP2A-202ENST00000596708 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
CHMP2A-202ENST00000596708 EIF4A2Q14240 407 aaKnown RBP14.54□□□□□ -0.08
CHMP2A-202ENST00000596708 AMIGO3Q86WK7 504 aa14.54□□□□□ -0.08
CHMP2A-202ENST00000596708 ASAP1Q9ULH1 1129 aa14.54□□□□□ -0.08
CHMP2A-202ENST00000596708 SSFA2P28290 1259 aa14.53□□□□□ -0.08
CHMP2A-202ENST00000596708 LINC00116Q8NCU8 138 aa14.53□□□□□ -0.08
CHMP2A-202ENST00000596708 CLSPNQ9HAW4 1339 aa14.52□□□□□ -0.08
CHMP2A-202ENST00000596708 EIF4G2P78344 907 aaKnown RBP eCLIP14.52□□□□□ -0.09
CHMP2A-202ENST00000596708 GNPATO15228 680 aa14.51□□□□□ -0.09
CHMP2A-202ENST00000596708 PANK3Q9H999 370 aa14.51□□□□□ -0.09
CHMP2A-202ENST00000596708 WWC3Q9ULE0 1092 aa14.51□□□□□ -0.09
CHMP2A-202ENST00000596708 HSPA5P11021 654 aaKnown RBP14.5□□□□□ -0.09
CHMP2A-202ENST00000596708 ITPK1Q13572 414 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms