RNA–Protein interactions for RNA: ENST00000596502.1

DDX49-205, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-205ENST00000596502 HOXC9P31274 260 aa20.42■□□□□ 0.86
DDX49-205ENST00000596502 SLC16A10Q8TF71 515 aa20.42■□□□□ 0.86
DDX49-205ENST00000596502 TFCP2L1Q9NZI6 479 aa20.42■□□□□ 0.86
DDX49-205ENST00000596502 ST20-MTHFSA0A0A6YYL1 179 aa20.41■□□□□ 0.86
DDX49-205ENST00000596502 POLD1P28340 1107 aa20.41■□□□□ 0.86
DDX49-205ENST00000596502 PNPLA7Q6ZV29 1317 aa20.41■□□□□ 0.86
DDX49-205ENST00000596502 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
DDX49-205ENST00000596502 ZCRB1Q8TBF4 217 aaKnown RBP20.4■□□□□ 0.86
DDX49-205ENST00000596502 TESK2Q96S53 571 aa20.4■□□□□ 0.86
DDX49-205ENST00000596502 LY75O60449 1722 aa20.39■□□□□ 0.86
DDX49-205ENST00000596502 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.85
DDX49-205ENST00000596502 PELP1Q8IZL8 1130 aaKnown RBP20.39■□□□□ 0.85
DDX49-205ENST00000596502 COL24A1Q17RW2 1714 aa20.39■□□□□ 0.85
DDX49-205ENST00000596502 MEGF6O75095 1541 aa20.37■□□□□ 0.85
DDX49-205ENST00000596502 NSD2O96028 1365 aa20.36■□□□□ 0.85
DDX49-205ENST00000596502 RRS1Q15050 365 aaKnown RBP20.36■□□□□ 0.85
DDX49-205ENST00000596502 CCNL1Q9UK58 526 aaPredicted RBP20.36■□□□□ 0.85
DDX49-205ENST00000596502 MSH5O43196 834 aa20.35■□□□□ 0.85
DDX49-205ENST00000596502 NBPF6Q5VWK0 638 aa20.35■□□□□ 0.85
DDX49-205ENST00000596502 USHBP1Q8N6Y0 703 aa20.35■□□□□ 0.85
DDX49-205ENST00000596502 NBPF4Q96M43 638 aa20.35■□□□□ 0.85
DDX49-205ENST00000596502 NLGN2Q8NFZ4 835 aa20.34■□□□□ 0.85
DDX49-205ENST00000596502 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.85
DDX49-205ENST00000596502 C1QTNF8P60827 252 aa20.33■□□□□ 0.85
DDX49-205ENST00000596502 GGNBP2Q9H3C7 697 aa20.33■□□□□ 0.85
DDX49-205ENST00000596502 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
DDX49-205ENST00000596502 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
DDX49-205ENST00000596502 USP47Q96K76 1375 aa20.32■□□□□ 0.84
DDX49-205ENST00000596502 FYB1O15117 783 aa20.31■□□□□ 0.84
DDX49-205ENST00000596502 RAPGEF4Q8WZA2 1011 aa20.31■□□□□ 0.84
DDX49-205ENST00000596502 COL23A1Q86Y22 540 aaPredicted RBP20.3■□□□□ 0.84
DDX49-205ENST00000596502 TATP17735 454 aaPredicted RBP20.29■□□□□ 0.84
DDX49-205ENST00000596502 CGNL1Q0VF96 1302 aa20.28■□□□□ 0.84
DDX49-205ENST00000596502 SMG6Q86US8 1419 aaKnown RBP20.28■□□□□ 0.84
DDX49-205ENST00000596502 MSL1Q68DK7 614 aa20.28■□□□□ 0.84
DDX49-205ENST00000596502 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
DDX49-205ENST00000596502 C5P01031 1676 aa20.27■□□□□ 0.84
DDX49-205ENST00000596502 TMF1P82094 1093 aa20.27■□□□□ 0.84
DDX49-205ENST00000596502 HSP90AB2PQ58FF8 381 aa20.27■□□□□ 0.84
DDX49-205ENST00000596502 TAF1LQ8IZX4 1826 aa20.27■□□□□ 0.84
DDX49-205ENST00000596502 GIGYF1O75420 1035 aaPredicted RBP20.25■□□□□ 0.83
DDX49-205ENST00000596502 YBX3P16989 372 aaKnown RBP eCLIP20.25■□□□□ 0.83
DDX49-205ENST00000596502 ITGB4P16144 1822 aa20.25■□□□□ 0.83
DDX49-205ENST00000596502 MPRIPQ6WCQ1 1025 aa20.24■□□□□ 0.83
DDX49-205ENST00000596502 PCDH11XQ9BZA7 1347 aa20.24■□□□□ 0.83
DDX49-205ENST00000596502 PCDH11YQ9BZA8 1340 aa20.24■□□□□ 0.83
DDX49-205ENST00000596502 INSRP06213 1382 aa20.23■□□□□ 0.83
DDX49-205ENST00000596502 GRIN3BO60391 1043 aa20.23■□□□□ 0.83
DDX49-205ENST00000596502 FLT4P35916 1363 aa20.21■□□□□ 0.83
DDX49-205ENST00000596502 PALLDQ8WX93 1383 aa20.21■□□□□ 0.83
DDX49-205ENST00000596502 CEP350Q5VT06 3117 aa20.21■□□□□ 0.83
DDX49-205ENST00000596502 CYP27B1O15528 508 aa20.21■□□□□ 0.83
DDX49-205ENST00000596502 TOGARAM1Q9Y4F4 1720 aa20.2■□□□□ 0.82
DDX49-205ENST00000596502 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
DDX49-205ENST00000596502 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
DDX49-205ENST00000596502 C4BP0C0L5 1744 aa20.18■□□□□ 0.82
DDX49-205ENST00000596502 PPM1GO15355 546 aaPredicted RBP20.17■□□□□ 0.82
DDX49-205ENST00000596502 HMGB2P26583 209 aaKnown RBP20.17■□□□□ 0.82
DDX49-205ENST00000596502 CDCA8Q53HL2 280 aa20.17■□□□□ 0.82
DDX49-205ENST00000596502 SMARCC1Q92922 1105 aaPredicted RBP20.17■□□□□ 0.82
DDX49-205ENST00000596502 AK7Q96M32 723 aa20.17■□□□□ 0.82
DDX49-205ENST00000596502 CD2APQ9Y5K6 639 aa20.17■□□□□ 0.82
DDX49-205ENST00000596502 KIF24Q5T7B8 1368 aa20.17■□□□□ 0.82
DDX49-205ENST00000596502 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
DDX49-205ENST00000596502 MAP2P11137 1827 aaKnown RBP20.16■□□□□ 0.82
DDX49-205ENST00000596502 UBR3Q6ZT12 1888 aa20.16■□□□□ 0.82
DDX49-205ENST00000596502 SMIM5Q71RC9 77 aa20.16■□□□□ 0.82
DDX49-205ENST00000596502 CARD14Q9BXL6 1004 aa20.16■□□□□ 0.82
DDX49-205ENST00000596502 PHF14O94880 888 aa20.15■□□□□ 0.82
DDX49-205ENST00000596502 AMIGO3Q86WK7 504 aa20.15■□□□□ 0.82
DDX49-205ENST00000596502 PIGBQ92521 554 aa20.15■□□□□ 0.82
DDX49-205ENST00000596502 NSD3Q9BZ95 1437 aa20.14■□□□□ 0.81
DDX49-205ENST00000596502 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
DDX49-205ENST00000596502 WWC3Q9ULE0 1092 aa20.12■□□□□ 0.81
DDX49-205ENST00000596502 SPG7Q9UQ90 795 aa20.12■□□□□ 0.81
DDX49-205ENST00000596502 ATP10DQ9P241 1426 aa20.11■□□□□ 0.81
DDX49-205ENST00000596502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.11■□□□□ 0.81
DDX49-205ENST00000596502 NKX1-1Q15270 411 aaPredicted RBP20.11■□□□□ 0.81
DDX49-205ENST00000596502 LOC102724428A0A0B4J2F2 783 aa20.09■□□□□ 0.81
DDX49-205ENST00000596502 SIK1P57059 783 aa20.09■□□□□ 0.81
DDX49-205ENST00000596502 LINC00116Q8NCU8 138 aa20.09■□□□□ 0.81
DDX49-205ENST00000596502 EYA1Q99502 592 aa20.09■□□□□ 0.81
DDX49-205ENST00000596502 TMOD3Q9NYL9 352 aa20.09■□□□□ 0.81
DDX49-205ENST00000596502 ANKRD26Q9UPS8 1709 aa20.09■□□□□ 0.81
DDX49-205ENST00000596502 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
DDX49-205ENST00000596502 WASHC2AQ641Q2 1341 aa20.08■□□□□ 0.81
DDX49-205ENST00000596502 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
DDX49-205ENST00000596502 GPBP1L1Q9HC44 474 aaPredicted RBP20.08■□□□□ 0.81
DDX49-205ENST00000596502 ASAP1Q9ULH1 1129 aa20.08■□□□□ 0.81
DDX49-205ENST00000596502 SSFA2P28290 1259 aa20.07■□□□□ 0.8
DDX49-205ENST00000596502 ZNF526Q8TF50 670 aaPredicted RBP20.07■□□□□ 0.8
DDX49-205ENST00000596502 GNPATO15228 680 aa20.05■□□□□ 0.8
DDX49-205ENST00000596502 ATP6V1AP38606 617 aa20.05■□□□□ 0.8
DDX49-205ENST00000596502 ITPK1Q13572 414 aa20.05■□□□□ 0.8
DDX49-205ENST00000596502 IFNL2Q8IZJ0 200 aa20.05■□□□□ 0.8
DDX49-205ENST00000596502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.05■□□□□ 0.8
DDX49-205ENST00000596502 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
DDX49-205ENST00000596502 PHKG2P15735 406 aa20.04■□□□□ 0.8
DDX49-205ENST00000596502 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
DDX49-205ENST00000596502 POLKQ9UBT6 870 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms