RNA–Protein interactions for RNA: ENST00000592396.1

SAFB-212, Transcript of scaffold attachment factor B, humanhuman

TSL 4

Gene SAFB, Length 620 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-212ENST00000592396 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
SAFB-212ENST00000592396 PLEKHG2Q9H7P9 1386 aa8.31□□□□□ -1.08
SAFB-212ENST00000592396 COL24A1Q17RW2 1714 aa8.31□□□□□ -1.08
SAFB-212ENST00000592396 SCN11AQ9UI33 1791 aa8.3□□□□□ -1.08
SAFB-212ENST00000592396 ZNF831Q5JPB2 1677 aa8.3□□□□□ -1.08
SAFB-212ENST00000592396 EXOC5O00471 708 aa8.29□□□□□ -1.08
SAFB-212ENST00000592396 APBA3O96018 575 aa8.29□□□□□ -1.08
SAFB-212ENST00000592396 EN1Q05925 392 aaPredicted RBP8.29□□□□□ -1.08
SAFB-212ENST00000592396 RRS1Q15050 365 aaKnown RBP8.29□□□□□ -1.08
SAFB-212ENST00000592396 MARCH10Q8NA82 808 aaPredicted RBP8.29□□□□□ -1.08
SAFB-212ENST00000592396 CAMKK2Q96RR4 588 aa8.29□□□□□ -1.08
SAFB-212ENST00000592396 KIF7Q2M1P5 1343 aa8.29□□□□□ -1.08
SAFB-212ENST00000592396 KCNA4P22459 653 aa8.28□□□□□ -1.08
SAFB-212ENST00000592396 POLR3GLQ9BT43 218 aa8.28□□□□□ -1.08
SAFB-212ENST00000592396 BCL11BQ9C0K0 894 aaPredicted RBP8.28□□□□□ -1.08
SAFB-212ENST00000592396 CICQ96RK0 1608 aaPredicted RBP8.28□□□□□ -1.08
SAFB-212ENST00000592396 COL5A3P25940 1745 aaPredicted RBP8.27□□□□□ -1.09
SAFB-212ENST00000592396 EZH2Q15910 746 aaKnown RBP8.27□□□□□ -1.09
SAFB-212ENST00000592396 LTV1Q96GA3 475 aaPredicted RBP8.27□□□□□ -1.09
SAFB-212ENST00000592396 RNF39Q9H2S5 420 aa8.27□□□□□ -1.09
SAFB-212ENST00000592396 EMILIN1Q9Y6C2 1016 aa8.27□□□□□ -1.09
SAFB-212ENST00000592396 UBR3Q6ZT12 1888 aa8.27□□□□□ -1.09
SAFB-212ENST00000592396 WASHC2AQ641Q2 1341 aa8.27□□□□□ -1.09
SAFB-212ENST00000592396 PLSCR1O15162 318 aa8.26□□□□□ -1.09
SAFB-212ENST00000592396 FBLN1P23142 703 aa8.26□□□□□ -1.09
SAFB-212ENST00000592396 PANK3Q9H999 370 aa8.26□□□□□ -1.09
SAFB-212ENST00000592396 ADAMTS7Q9UKP4 1686 aa8.26□□□□□ -1.09
SAFB-212ENST00000592396 PCDH11XQ9BZA7 1347 aa8.26□□□□□ -1.09
SAFB-212ENST00000592396 PCDH11YQ9BZA8 1340 aa8.26□□□□□ -1.09
SAFB-212ENST00000592396 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
SAFB-212ENST00000592396 HSP90AB2PQ58FF8 381 aa8.25□□□□□ -1.09
SAFB-212ENST00000592396 NBPF6Q5VWK0 638 aa8.25□□□□□ -1.09
SAFB-212ENST00000592396 RAPGEF4Q8WZA2 1011 aa8.25□□□□□ -1.09
SAFB-212ENST00000592396 NBPF4Q96M43 638 aa8.25□□□□□ -1.09
SAFB-212ENST00000592396 C4BP0C0L5 1744 aa8.24□□□□□ -1.09
SAFB-212ENST00000592396 KNSTRNQ9Y448 316 aa8.24□□□□□ -1.09
SAFB-212ENST00000592396 SIPA1L3O60292 1781 aaPredicted RBP8.24□□□□□ -1.09
SAFB-212ENST00000592396 COL3A1P02461 1466 aaPredicted RBP8.24□□□□□ -1.09
SAFB-212ENST00000592396 IGSF1Q8N6C5 1336 aa8.24□□□□□ -1.09
SAFB-212ENST00000592396 UBR2Q8IWV8 1755 aa8.23□□□□□ -1.09
SAFB-212ENST00000592396 PSDA5PKW4 1024 aaPredicted RBP8.23□□□□□ -1.09
SAFB-212ENST00000592396 TATP17735 454 aaPredicted RBP8.23□□□□□ -1.09
SAFB-212ENST00000592396 R3HDM1Q15032 1099 aaKnown RBP8.23□□□□□ -1.09
SAFB-212ENST00000592396 NBPF14Q5TI25 921 aa8.23□□□□□ -1.09
SAFB-212ENST00000592396 USHBP1Q8N6Y0 703 aa8.23□□□□□ -1.09
SAFB-212ENST00000592396 ZCRB1Q8TBF4 217 aaKnown RBP8.23□□□□□ -1.09
SAFB-212ENST00000592396 POLKQ9UBT6 870 aa8.23□□□□□ -1.09
SAFB-212ENST00000592396 PPM1GO15355 546 aaPredicted RBP8.22□□□□□ -1.09
SAFB-212ENST00000592396 AMER1Q5JTC6 1135 aaPredicted RBP8.22□□□□□ -1.09
SAFB-212ENST00000592396 PTF1AQ7RTS3 328 aa8.22□□□□□ -1.09
SAFB-212ENST00000592396 DLG5Q8TDM6 1919 aa8.22□□□□□ -1.09
SAFB-212ENST00000592396 C4AP0C0L4 1744 aa8.22□□□□□ -1.09
SAFB-212ENST00000592396 TJP1Q07157 1748 aa8.22□□□□□ -1.09
SAFB-212ENST00000592396 KDRP35968 1356 aa8.22□□□□□ -1.09
SAFB-212ENST00000592396 MRC1P22897 1456 aa8.21□□□□□ -1.09
SAFB-212ENST00000592396 KCNQ2O43526 872 aa8.21□□□□□ -1.1
SAFB-212ENST00000592396 TNNT2P45379 298 aaPredicted RBP8.21□□□□□ -1.1
SAFB-212ENST00000592396 EIF4A2Q14240 407 aaKnown RBP8.21□□□□□ -1.1
SAFB-212ENST00000592396 TXNRD1Q16881 649 aa8.21□□□□□ -1.1
SAFB-212ENST00000592396 MORC1Q86VD1 984 aa8.21□□□□□ -1.1
SAFB-212ENST00000592396 DDX54Q8TDD1 881 aaKnown RBP8.21□□□□□ -1.1
SAFB-212ENST00000592396 ACSBG1Q96GR2 724 aa8.21□□□□□ -1.1
SAFB-212ENST00000592396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.21□□□□□ -1.12e-11■□□□□ 9.2
SAFB-212ENST00000592396 CHD4Q14839 1912 aa8.21□□□□□ -1.1
SAFB-212ENST00000592396 CACNB1Q02641 598 aaPredicted RBP8.2□□□□□ -1.1
SAFB-212ENST00000592396 EYA1Q99502 592 aa8.2□□□□□ -1.1
SAFB-212ENST00000592396 ANO8Q9HCE9 1232 aaPredicted RBP8.2□□□□□ -1.1
SAFB-212ENST00000592396 SLC27A3Q5K4L6 730 aa8.19□□□□□ -1.1
SAFB-212ENST00000592396 SPG7Q9UQ90 795 aa8.19□□□□□ -1.1
SAFB-212ENST00000592396 MYH14Q7Z406 1995 aaKnown RBP8.19□□□□□ -1.1
SAFB-212ENST00000592396 CYP27B1O15528 508 aa8.18□□□□□ -1.1
SAFB-212ENST00000592396 PER1O15534 1290 aaPredicted RBP8.18□□□□□ -1.1
SAFB-212ENST00000592396 PROM2Q8N271 834 aa8.18□□□□□ -1.1
SAFB-212ENST00000592396 STK32BQ9NY57 414 aa8.18□□□□□ -1.1
SAFB-212ENST00000592396 KDM6AO15550 1401 aaPredicted RBP8.18□□□□□ -1.1
SAFB-212ENST00000592396 KIF13BQ9NQT8 1826 aa8.17□□□□□ -1.1
SAFB-212ENST00000592396 PRIM1P49642 420 aaKnown RBP8.17□□□□□ -1.1
SAFB-212ENST00000592396 NKX1-1Q15270 411 aaPredicted RBP8.17□□□□□ -1.1
SAFB-212ENST00000592396 SLC15A2Q16348 729 aa8.17□□□□□ -1.1
SAFB-212ENST00000592396 SYTL4Q96C24 671 aaPredicted RBP8.17□□□□□ -1.1
SAFB-212ENST00000592396 PALLDQ8WX93 1383 aa8.17□□□□□ -1.1
SAFB-212ENST00000592396 LAMB4A4D0S4 1761 aa8.17□□□□□ -1.1
SAFB-212ENST00000592396 HMGB2P26583 209 aaKnown RBP8.16□□□□□ -1.1
SAFB-212ENST00000592396 IFNL2Q8IZJ0 200 aa8.16□□□□□ -1.1
SAFB-212ENST00000592396 SPON1Q9HCB6 807 aa8.16□□□□□ -1.1
SAFB-212ENST00000592396 PHKG2P15735 406 aa8.15□□□□□ -1.1
SAFB-212ENST00000592396 IL13P35225 146 aa8.15□□□□□ -1.1
SAFB-212ENST00000592396 ZNF827Q17R98 1081 aa8.15□□□□□ -1.1
SAFB-212ENST00000592396 CC2D1BQ5T0F9 858 aaKnown RBP8.15□□□□□ -1.1
SAFB-212ENST00000592396 LRRC4BQ9NT99 713 aa8.15□□□□□ -1.1
SAFB-212ENST00000592396 CCNL1Q9UK58 526 aaPredicted RBP8.15□□□□□ -1.1
SAFB-212ENST00000592396 HSP90AB1P08238 724 aaKnown RBP8.14□□□□□ -1.11
SAFB-212ENST00000592396 MTHFSP49914 203 aa8.14□□□□□ -1.11
SAFB-212ENST00000592396 C1QBPQ07021 282 aaKnown RBP8.14□□□□□ -1.11
SAFB-212ENST00000592396 AMOTQ4VCS5 1084 aa8.14□□□□□ -1.11
SAFB-212ENST00000592396 AEBP1Q8IUX7 1158 aa8.14□□□□□ -1.11
SAFB-212ENST00000592396 SMARCC1Q92922 1105 aaPredicted RBP8.14□□□□□ -1.11
SAFB-212ENST00000592396 AKT1S1Q96B36 256 aa8.14□□□□□ -1.11
SAFB-212ENST00000592396 TMOD3Q9NYL9 352 aa8.14□□□□□ -1.11
SAFB-212ENST00000592396 BRCA1P38398 1863 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms