RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
RAVER1-204ENST00000592208 MPRIPQ6WCQ1 1025 aa17.46■□□□□ 0.39
RAVER1-204ENST00000592208 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
RAVER1-204ENST00000592208 CYP46A1Q9Y6A2 500 aa17.45■□□□□ 0.38
RAVER1-204ENST00000592208 KINO60870 393 aaKnown RBP17.45■□□□□ 0.38
RAVER1-204ENST00000592208 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
RAVER1-204ENST00000592208 BICDL1Q6ZP65 573 aa17.45■□□□□ 0.38
RAVER1-204ENST00000592208 KRT32Q14532 448 aa17.45■□□□□ 0.38
RAVER1-204ENST00000592208 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
RAVER1-204ENST00000592208 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.45■□□□□ 0.38
RAVER1-204ENST00000592208 SRGAP3O43295 1099 aa17.44■□□□□ 0.38
RAVER1-204ENST00000592208 CDR1P51861 262 aa17.44■□□□□ 0.38
RAVER1-204ENST00000592208 CHRNA2Q15822 529 aa17.44■□□□□ 0.38
RAVER1-204ENST00000592208 CCAR2Q8N163 923 aaKnown RBP17.44■□□□□ 0.38
RAVER1-204ENST00000592208 MSH6P52701 1360 aa17.44■□□□□ 0.38
RAVER1-204ENST00000592208 CEP126Q9P2H0 1117 aa17.44■□□□□ 0.38
RAVER1-204ENST00000592208 SLFN5Q08AF3 891 aa17.44■□□□□ 0.38
RAVER1-204ENST00000592208 TRIM22Q8IYM9 498 aa17.44■□□□□ 0.38
RAVER1-204ENST00000592208 ACBD3Q9H3P7 528 aa17.43■□□□□ 0.38
RAVER1-204ENST00000592208 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
RAVER1-204ENST00000592208 PRM3Q9NNZ6 103 aa17.43■□□□□ 0.38
RAVER1-204ENST00000592208 RIMS2Q9UQ26 1411 aa17.43■□□□□ 0.38
RAVER1-204ENST00000592208 EXOC5O00471 708 aa17.42■□□□□ 0.38
RAVER1-204ENST00000592208 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
RAVER1-204ENST00000592208 CCDC85AQ96PX6 553 aaPredicted RBP17.42■□□□□ 0.38
RAVER1-204ENST00000592208 DISP3Q9P2K9 1392 aa17.42■□□□□ 0.38
RAVER1-204ENST00000592208 NSD2O96028 1365 aa17.42■□□□□ 0.38
RAVER1-204ENST00000592208 ALDH1L2Q3SY69 923 aa17.42■□□□□ 0.38
RAVER1-204ENST00000592208 ARGLU1Q9NWB6 273 aaPredicted RBP17.42■□□□□ 0.38
RAVER1-204ENST00000592208 CCP110O43303 1012 aa17.41■□□□□ 0.38
RAVER1-204ENST00000592208 UBAP1LF5GYI3 381 aa17.41■□□□□ 0.38
RAVER1-204ENST00000592208 FBLN1P23142 703 aa17.41■□□□□ 0.38
RAVER1-204ENST00000592208 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
RAVER1-204ENST00000592208 MTMR7Q9Y216 660 aa17.41■□□□□ 0.38
RAVER1-204ENST00000592208 OFD1O75665 1012 aa17.41■□□□□ 0.38
RAVER1-204ENST00000592208 FILIP1LQ4L180 1135 aa17.41■□□□□ 0.38
RAVER1-204ENST00000592208 CDKL5O76039 1030 aa17.41■□□□□ 0.38
RAVER1-204ENST00000592208 CCDC39Q9UFE4 941 aa17.41■□□□□ 0.38
RAVER1-204ENST00000592208 WDR33Q9C0J8 1336 aaKnown RBP17.4■□□□□ 0.38
RAVER1-204ENST00000592208 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
RAVER1-204ENST00000592208 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
RAVER1-204ENST00000592208 TOM1O60784 492 aa17.39■□□□□ 0.38
RAVER1-204ENST00000592208 CCDC173Q0VFZ6 552 aa17.39■□□□□ 0.38
RAVER1-204ENST00000592208 IL27Q8NEV9 243 aa17.39■□□□□ 0.38
RAVER1-204ENST00000592208 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.38
RAVER1-204ENST00000592208 CHD1LQ86WJ1 897 aa17.39■□□□□ 0.37
RAVER1-204ENST00000592208 ZMYM3Q14202 1370 aa17.39■□□□□ 0.37
RAVER1-204ENST00000592208 NPHP3Q7Z494 1330 aa17.39■□□□□ 0.37
RAVER1-204ENST00000592208 NEO1Q92859 1461 aa17.39■□□□□ 0.37
RAVER1-204ENST00000592208 RAB11FIP3O75154 756 aa17.39■□□□□ 0.37
RAVER1-204ENST00000592208 RDXP35241 583 aaKnown RBP17.39■□□□□ 0.37
RAVER1-204ENST00000592208 FOSBP53539 338 aa17.39■□□□□ 0.37
RAVER1-204ENST00000592208 IKQ13123 557 aaPredicted RBP17.39■□□□□ 0.37
RAVER1-204ENST00000592208 EPS15P42566 896 aa17.38■□□□□ 0.37
RAVER1-204ENST00000592208 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
RAVER1-204ENST00000592208 TEX35Q5T0J7 233 aa17.38■□□□□ 0.37
RAVER1-204ENST00000592208 ANKRD24Q8TF21 1146 aa17.38■□□□□ 0.37
RAVER1-204ENST00000592208 STK38Q15208 465 aa17.38■□□□□ 0.37
RAVER1-204ENST00000592208 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
RAVER1-204ENST00000592208 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
RAVER1-204ENST00000592208 SSH1Q8WYL5 1049 aa17.37■□□□□ 0.37
RAVER1-204ENST00000592208 IL1RAPL2Q9NP60 686 aa17.37■□□□□ 0.37
RAVER1-204ENST00000592208 DACH1Q9UI36 760 aa17.37■□□□□ 0.37
RAVER1-204ENST00000592208 CDK5RAP3Q96JB5 506 aa17.37■□□□□ 0.37
RAVER1-204ENST00000592208 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
RAVER1-204ENST00000592208 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
RAVER1-204ENST00000592208 HSP90AA2PQ14568 343 aaPredicted RBP17.36■□□□□ 0.37
RAVER1-204ENST00000592208 CT47A1Q5JQC4 288 aaPredicted RBP17.36■□□□□ 0.37
RAVER1-204ENST00000592208 SMARCE1Q969G3 411 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 MNS1Q8NEH6 495 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 ZNF592Q92610 1267 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 PDE4CQ08493 712 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 AACSQ86V21 672 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 SETQ01105 290 aaPredicted RBP17.36■□□□□ 0.37
RAVER1-204ENST00000592208 BLOC1S2Q6QNY1 142 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
RAVER1-204ENST00000592208 NASPP49321 788 aaPredicted RBP17.35■□□□□ 0.37
RAVER1-204ENST00000592208 RRP12Q5JTH9 1297 aaKnown RBP17.35■□□□□ 0.37
RAVER1-204ENST00000592208 TRAK2O60296 914 aa17.35■□□□□ 0.37
RAVER1-204ENST00000592208 CCAR1Q8IX12 1150 aaKnown RBP17.35■□□□□ 0.37
RAVER1-204ENST00000592208 KIF1BPQ96EK5 621 aa17.35■□□□□ 0.37
RAVER1-204ENST00000592208 HSP90AB3PQ58FF7 597 aa17.35■□□□□ 0.37
RAVER1-204ENST00000592208 NOL7Q9UMY1 257 aaKnown RBP17.35■□□□□ 0.37
RAVER1-204ENST00000592208 KRT85P78386 507 aa17.35■□□□□ 0.37
RAVER1-204ENST00000592208 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
RAVER1-204ENST00000592208 ODF2Q5BJF6 829 aa17.35■□□□□ 0.37
RAVER1-204ENST00000592208 WASF1Q92558 559 aa17.35■□□□□ 0.37
RAVER1-204ENST00000592208 C19orf44Q9H6X5 657 aa17.35■□□□□ 0.37
RAVER1-204ENST00000592208 ZPR1O75312 459 aa17.34■□□□□ 0.37
RAVER1-204ENST00000592208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.34■□□□□ 0.37
RAVER1-204ENST00000592208 TXLNBQ8N3L3 684 aa17.34■□□□□ 0.37
RAVER1-204ENST00000592208 KCNA6P17658 529 aa17.34■□□□□ 0.37
RAVER1-204ENST00000592208 IGHMBP2P38935 993 aaKnown RBP17.34■□□□□ 0.37
RAVER1-204ENST00000592208 FMNL2Q96PY5 1086 aa17.34■□□□□ 0.37
RAVER1-204ENST00000592208 ZNF287Q9HBT7 754 aa17.34■□□□□ 0.37
RAVER1-204ENST00000592208 MAGEC2Q9UBF1 373 aaPredicted RBP17.34■□□□□ 0.37
RAVER1-204ENST00000592208 MYO6Q9UM54 1294 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms