RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 C9orf78Q9NZ63 289 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP1-204ENST00000591662 G3V3G9 751 aa13.04□□□□□ -0.32
CNTNAP1-204ENST00000591662 PDE4CQ08493 712 aa13.04□□□□□ -0.32
CNTNAP1-204ENST00000591662 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
CNTNAP1-204ENST00000591662 TSPYL4Q9UJ04 414 aa13.04□□□□□ -0.32
CNTNAP1-204ENST00000591662 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
CNTNAP1-204ENST00000591662 BMS1Q14692 1282 aaKnown RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 TSR1Q2NL82 804 aaKnown RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 SPATA32Q96LK8 384 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 NLRP6P59044 892 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 TOMM22Q9NS69 142 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 ATF3P18847 181 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 MX1P20591 662 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 CPLX2Q6PUV4 134 aaKnown RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 CEP57L1Q8IYX8 460 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 CFAP45Q9UL16 551 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 EIF3JO75822 258 aaKnown RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 SMC2O95347 1197 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 ANAPC15P60006 121 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 PIBF1Q8WXW3 757 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 SH2B1Q9NRF2 756 aaPredicted RBP13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
CNTNAP1-204ENST00000591662 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.32
CNTNAP1-204ENST00000591662 C16orf45Q96MC5 204 aaPredicted RBP13.02□□□□□ -0.32
CNTNAP1-204ENST00000591662 ZBTB40Q9NUA8 1239 aa13.02□□□□□ -0.32
CNTNAP1-204ENST00000591662 UTP14CQ5TAP6 766 aaKnown RBP13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 RAPGEF4Q8WZA2 1011 aa13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 NECTIN2Q92692 538 aa13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 TMX3Q96JJ7 454 aa13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 DDX19AQ9NUU7 478 aaKnown RBP13.02□□□□□ -0.33
CNTNAP1-204ENST00000591662 CCDC171Q6TFL3 1326 aa13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 ERLIN1O75477 346 aa13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 LRRFIP1Q32MZ4 808 aaKnown RBP13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 CCDC30Q5VVM6 783 aa13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 OLFM4Q6UX06 510 aa13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 INTS4Q96HW7 963 aaKnown RBP13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 ATAD2Q6PL18 1390 aa13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 GABPB1Q06547 395 aaPredicted RBP13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 CLIP2Q9UDT6 1046 aa13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 RPGRIP1LQ68CZ1 1315 aa13.01□□□□□ -0.33
CNTNAP1-204ENST00000591662 DDX58O95786 925 aaKnown RBP13□□□□□ -0.33
CNTNAP1-204ENST00000591662 TRMT2AQ8IZ69 625 aaKnown RBP13□□□□□ -0.33
CNTNAP1-204ENST00000591662 PDRG1Q9NUG6 133 aa13□□□□□ -0.33
CNTNAP1-204ENST00000591662 LIMCH1Q9UPQ0 1083 aa13□□□□□ -0.33
CNTNAP1-204ENST00000591662 KDM5CP41229 1560 aa13□□□□□ -0.33
CNTNAP1-204ENST00000591662 NOL10Q9BSC4 688 aaKnown RBP13□□□□□ -0.33
CNTNAP1-204ENST00000591662 SLC4A2P04920 1241 aa13□□□□□ -0.33
CNTNAP1-204ENST00000591662 G3BP1Q13283 466 aaKnown RBP eCLIP13□□□□□ -0.33
CNTNAP1-204ENST00000591662 UPF3BQ9BZI7 483 aaKnown RBP13□□□□□ -0.33
CNTNAP1-204ENST00000591662 TTC12Q9H892 705 aaPredicted RBP13□□□□□ -0.33
CNTNAP1-204ENST00000591662 KIF21AQ7Z4S6 1674 aa13□□□□□ -0.33
CNTNAP1-204ENST00000591662 STX6O43752 255 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 GSDMDP57764 484 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 ANKRD20A12PQ8NF67 263 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 DEF6Q9H4E7 631 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 SLC52A1Q9NWF4 448 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 SMTNL1A8MU46 457 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 CTAGE5O15320 804 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 CBFA2T2O43439 604 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 IPO7O95373 1038 aaKnown RBP12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 APPP05067 770 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 USP8P40818 1118 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 CPLX1O14810 134 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 NUTM2GQ5VZR2 741 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 CEP135Q66GS9 1140 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 CREBRFQ8IUR6 639 aa12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 ZNF830Q96NB3 372 aaPredicted RBP12.99□□□□□ -0.33
CNTNAP1-204ENST00000591662 ERC1Q8IUD2 1116 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 FAM200AQ8TCP9 573 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 LMBRD1Q9NUN5 540 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 ADGRL2O95490 1459 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 CLSTN1O94985 981 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 SHANK2Q9UPX8 1470 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 TUBB4AP04350 444 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 GDPD2Q9HCC8 539 aa12.98□□□□□ -0.33
CNTNAP1-204ENST00000591662 RAPGEF3O95398 923 aa12.97□□□□□ -0.33
CNTNAP1-204ENST00000591662 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
CNTNAP1-204ENST00000591662 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
CNTNAP1-204ENST00000591662 KDM4AO75164 1064 aa12.97□□□□□ -0.33
CNTNAP1-204ENST00000591662 ZSCAN22P10073 491 aaPredicted RBP12.97□□□□□ -0.33
CNTNAP1-204ENST00000591662 DMTNQ08495 405 aa12.97□□□□□ -0.33
CNTNAP1-204ENST00000591662 ZNF397Q8NF99 534 aaPredicted RBP12.97□□□□□ -0.33
CNTNAP1-204ENST00000591662 ANO10Q9NW15 660 aa12.97□□□□□ -0.33
CNTNAP1-204ENST00000591662 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms