RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
SMARCA4-216ENST00000591545 WDR7Q9Y4E6 1490 aa15.85■□□□□ 0.13
SMARCA4-216ENST00000591545 C14orf93Q9H972 538 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-216ENST00000591545 ATP2B2Q01814 1243 aa15.84■□□□□ 0.13
SMARCA4-216ENST00000591545 RRP12Q5JTH9 1297 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-216ENST00000591545 ZSCAN29Q8IWY8 852 aaPredicted RBP15.83■□□□□ 0.13
SMARCA4-216ENST00000591545 TSPY26PQ9H489 355 aa15.83■□□□□ 0.13
SMARCA4-216ENST00000591545 ZNF518AQ6AHZ1 1483 aa15.83■□□□□ 0.13
SMARCA4-216ENST00000591545 TAF7Q15545 349 aaPredicted RBP15.83■□□□□ 0.13
SMARCA4-216ENST00000591545 CWC15Q9P013 229 aaKnown RBP15.83■□□□□ 0.13
SMARCA4-216ENST00000591545 RAPGEF6Q8TEU7 1601 aa15.83■□□□□ 0.12
SMARCA4-216ENST00000591545 ADAMTS12P58397 1594 aa15.83■□□□□ 0.12
SMARCA4-216ENST00000591545 A2MP01023 1474 aa15.83■□□□□ 0.12
SMARCA4-216ENST00000591545 LARP1Q6PKG0 1096 aaKnown RBP15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 USHBP1Q8N6Y0 703 aa15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 CDCA7LQ96GN5 454 aa15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 SDF4Q9BRK5 362 aa15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 TMPOP42166 694 aaKnown RBP15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 LRRCC1Q9C099 1032 aa15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 ATP10BO94823 1461 aa15.82■□□□□ 0.12
SMARCA4-216ENST00000591545 IFNL2Q8IZJ0 200 aa15.81■□□□□ 0.12
SMARCA4-216ENST00000591545 TTC21BQ7Z4L5 1316 aa15.81■□□□□ 0.12
SMARCA4-216ENST00000591545 WDHD1O75717 1129 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-216ENST00000591545 CCDC66A2RUB6 948 aa15.81■□□□□ 0.12
SMARCA4-216ENST00000591545 NUP153P49790 1475 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-216ENST00000591545 RPRD2Q5VT52 1461 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-216ENST00000591545 SRGAP3O43295 1099 aa15.81■□□□□ 0.12
SMARCA4-216ENST00000591545 RAI14Q9P0K7 980 aa15.81■□□□□ 0.12
SMARCA4-216ENST00000591545 ATF7IPQ6VMQ6 1270 aa15.8■□□□□ 0.12
SMARCA4-216ENST00000591545 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
SMARCA4-216ENST00000591545 KINO60870 393 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-216ENST00000591545 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
SMARCA4-216ENST00000591545 C1orf115Q9H7X2 142 aa15.8■□□□□ 0.12
SMARCA4-216ENST00000591545 PIP4K2AP48426 406 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 DUSP27Q5VZP5 1158 aa15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 FOSBP53539 338 aa15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 CAVIN1Q6NZI2 390 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 ACEP12821 1306 aa15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 ZNF396Q96N95 335 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 LRP2BPQ9P2M1 347 aa15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 FKBP4Q02790 459 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 MCM10Q7L590 875 aa15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 EMILIN1Q9Y6C2 1016 aa15.79■□□□□ 0.12
SMARCA4-216ENST00000591545 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 RPGRQ92834 1020 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 PRKCSHP14314 528 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 WWC2Q6AWC2 1192 aa15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 HSPA2P54652 639 aa15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 METTL24Q5JXM2 366 aa15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 AEBP1Q8IUX7 1158 aa15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 CCDC85AQ96PX6 553 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 CIZ1Q9ULV3 898 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 MYO6Q9UM54 1294 aa15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 IFIT1P09914 478 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-216ENST00000591545 CAVIN4Q5BKX8 364 aa15.77■□□□□ 0.12
SMARCA4-216ENST00000591545 AACSQ86V21 672 aa15.77■□□□□ 0.12
SMARCA4-216ENST00000591545 SMARCE1Q969G3 411 aa15.77■□□□□ 0.12
SMARCA4-216ENST00000591545 WDR62O43379 1518 aa15.77■□□□□ 0.12
SMARCA4-216ENST00000591545 NEK4P51957 841 aa15.77■□□□□ 0.12
SMARCA4-216ENST00000591545 CHRNA2Q15822 529 aa15.77■□□□□ 0.12
SMARCA4-216ENST00000591545 ANKRD24Q8TF21 1146 aa15.77■□□□□ 0.12
SMARCA4-216ENST00000591545 AKAP2Q9Y2D5 859 aa15.77■□□□□ 0.12
SMARCA4-216ENST00000591545 C19orf44Q9H6X5 657 aa15.77■□□□□ 0.11
SMARCA4-216ENST00000591545 FILIP1LQ4L180 1135 aa15.77■□□□□ 0.11
SMARCA4-216ENST00000591545 TCOF1Q13428 1488 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 BACH2Q9BYV9 841 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 KIAA0556O60303 1618 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 NAP1L1P55209 391 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 PKNOX2Q96KN3 472 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 SCAF11Q99590 1463 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 A0A087WZG4 1122 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 RNF214Q8ND24 703 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 TRMT112Q9UI30 125 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 TTC21AQ8NDW8 1320 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 ANKIB1Q9P2G1 1089 aa15.76■□□□□ 0.11
SMARCA4-216ENST00000591545 ABCC10Q5T3U5 1492 aa15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 MIS18AQ9NYP9 233 aa15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 PDIA4P13667 645 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 ANKRD1Q15327 319 aa15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 JMYQ8N9B5 988 aa15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 RIMS2Q9UQ26 1411 aa15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 ABCC11Q96J66 1382 aa15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 CTNNA3Q9UI47 895 aa15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 NSD2O96028 1365 aa15.75■□□□□ 0.11
SMARCA4-216ENST00000591545 OFD1O75665 1012 aa15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 TDO2P48775 406 aa15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 RPAP2Q8IXW5 612 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 WDR33Q9C0J8 1336 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 PRPF40AO75400 957 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 TRIM22Q8IYM9 498 aa15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 PDILTQ8N807 584 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms