RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 ZCRB1Q8TBF4 217 aaKnown RBP31.6■■■□□ 2.65
CXXC1-216ENST00000591474 COL24A1Q17RW2 1714 aa31.6■■■□□ 2.65
CXXC1-216ENST00000591474 PRIM1P49642 420 aaKnown RBP31.59■■■□□ 2.65
CXXC1-216ENST00000591474 SLC16A10Q8TF71 515 aa31.59■■■□□ 2.65
CXXC1-216ENST00000591474 TUBGCP6Q96RT7 1819 aa31.59■■■□□ 2.65
CXXC1-216ENST00000591474 FYB1O15117 783 aa31.58■■■□□ 2.65
CXXC1-216ENST00000591474 TMF1P82094 1093 aa31.58■■■□□ 2.65
CXXC1-216ENST00000591474 SYTL4Q96C24 671 aaPredicted RBP31.58■■■□□ 2.65
CXXC1-216ENST00000591474 USP47Q96K76 1375 aa31.57■■■□□ 2.64
CXXC1-216ENST00000591474 RRS1Q15050 365 aaKnown RBP31.57■■■□□ 2.64
CXXC1-216ENST00000591474 PNPLA7Q6ZV29 1317 aa31.56■■■□□ 2.64
CXXC1-216ENST00000591474 CHD4Q14839 1912 aa31.56■■■□□ 2.64
CXXC1-216ENST00000591474 CGNL1Q0VF96 1302 aa31.55■■■□□ 2.64
CXXC1-216ENST00000591474 GGNBP2Q9H3C7 697 aa31.55■■■□□ 2.64
CXXC1-216ENST00000591474 SMG6Q86US8 1419 aaKnown RBP31.55■■■□□ 2.64
CXXC1-216ENST00000591474 KIF20BQ96Q89 1820 aa31.54■■■□□ 2.64
CXXC1-216ENST00000591474 NBPF6Q5VWK0 638 aa31.54■■■□□ 2.64
CXXC1-216ENST00000591474 NBPF4Q96M43 638 aa31.54■■■□□ 2.64
CXXC1-216ENST00000591474 KCNQ4P56696 695 aa31.51■■■□□ 2.63
CXXC1-216ENST00000591474 ZNF784Q8NCA9 323 aaPredicted RBP31.51■■■□□ 2.63
CXXC1-216ENST00000591474 TFCP2L1Q9NZI6 479 aa31.51■■■□□ 2.63
CXXC1-216ENST00000591474 INSRP06213 1382 aa31.49■■■□□ 2.63
CXXC1-216ENST00000591474 KIF24Q5T7B8 1368 aa31.49■■■□□ 2.63
CXXC1-216ENST00000591474 POLD1P28340 1107 aa31.49■■■□□ 2.63
CXXC1-216ENST00000591474 CDCA8Q53HL2 280 aa31.48■■■□□ 2.63
CXXC1-216ENST00000591474 USHBP1Q8N6Y0 703 aa31.48■■■□□ 2.63
CXXC1-216ENST00000591474 RAPGEF4Q8WZA2 1011 aa31.48■■■□□ 2.63
CXXC1-216ENST00000591474 CCNL1Q9UK58 526 aaPredicted RBP31.47■■■□□ 2.63
CXXC1-216ENST00000591474 FLT4P35916 1363 aa31.46■■■□□ 2.63
CXXC1-216ENST00000591474 GOLGB1Q14789 3259 aaKnown RBP31.45■■■□□ 2.63
CXXC1-216ENST00000591474 TATP17735 454 aaPredicted RBP31.45■■■□□ 2.63
CXXC1-216ENST00000591474 HSP90AB2PQ58FF8 381 aa31.44■■■□□ 2.62
CXXC1-216ENST00000591474 PCDH11XQ9BZA7 1347 aa31.43■■■□□ 2.62
CXXC1-216ENST00000591474 PCDH11YQ9BZA8 1340 aa31.43■■■□□ 2.62
CXXC1-216ENST00000591474 GPR162Q16538 588 aa31.4■■■□□ 2.62
CXXC1-216ENST00000591474 C5P01031 1676 aa31.4■■■□□ 2.62
CXXC1-216ENST00000591474 KLHL34Q8N239 644 aa31.39■■■□□ 2.62
CXXC1-216ENST00000591474 TRIM26Q12899 539 aaPredicted RBP31.38■■■□□ 2.61
CXXC1-216ENST00000591474 CARD14Q9BXL6 1004 aa31.37■■■□□ 2.61
CXXC1-216ENST00000591474 NSD3Q9BZ95 1437 aa31.37■■■□□ 2.61
CXXC1-216ENST00000591474 PKD1L3Q7Z443 1732 aa31.37■■■□□ 2.61
CXXC1-216ENST00000591474 ANKRD26Q9UPS8 1709 aa31.35■■■□□ 2.61
CXXC1-216ENST00000591474 NCAPD2Q15021 1401 aa31.35■■■□□ 2.61
CXXC1-216ENST00000591474 COL23A1Q86Y22 540 aaPredicted RBP31.35■■■□□ 2.61
CXXC1-216ENST00000591474 TAF1LQ8IZX4 1826 aa31.35■■■□□ 2.61
CXXC1-216ENST00000591474 TOGARAM1Q9Y4F4 1720 aa31.35■■■□□ 2.61
CXXC1-216ENST00000591474 HMGB2P26583 209 aaKnown RBP31.34■■■□□ 2.61
CXXC1-216ENST00000591474 EMILIN1Q9Y6C2 1016 aa31.34■■■□□ 2.61
CXXC1-216ENST00000591474 PALLDQ8WX93 1383 aa31.33■■■□□ 2.61
CXXC1-216ENST00000591474 CYP27B1O15528 508 aa31.33■■■□□ 2.61
CXXC1-216ENST00000591474 NLGN2Q8NFZ4 835 aa31.33■■■□□ 2.61
CXXC1-216ENST00000591474 ITGB4P16144 1822 aa31.33■■■□□ 2.61
CXXC1-216ENST00000591474 MSH5O43196 834 aa31.31■■■□□ 2.6
CXXC1-216ENST00000591474 MPRIPQ6WCQ1 1025 aa31.29■■■□□ 2.6
CXXC1-216ENST00000591474 PELP1Q8IZL8 1130 aaKnown RBP31.27■■■□□ 2.6
CXXC1-216ENST00000591474 FLAD1Q8NFF5 587 aa31.27■■■□□ 2.6
CXXC1-216ENST00000591474 TIMELESSQ9UNS1 1208 aa31.27■■■□□ 2.6
CXXC1-216ENST00000591474 C4BP0C0L5 1744 aa31.27■■■□□ 2.6
CXXC1-216ENST00000591474 SMARCC1Q92922 1105 aaPredicted RBP31.26■■■□□ 2.59
CXXC1-216ENST00000591474 WASHC2AQ641Q2 1341 aa31.25■■■□□ 2.59
CXXC1-216ENST00000591474 MAP2P11137 1827 aaKnown RBP31.25■■■□□ 2.59
CXXC1-216ENST00000591474 NKX1-1Q15270 411 aaPredicted RBP31.24■■■□□ 2.59
CXXC1-216ENST00000591474 MSL1Q68DK7 614 aa31.24■■■□□ 2.59
CXXC1-216ENST00000591474 PPM1GO15355 546 aaPredicted RBP31.22■■■□□ 2.59
CXXC1-216ENST00000591474 SPG7Q9UQ90 795 aa31.22■■■□□ 2.59
CXXC1-216ENST00000591474 C1QTNF8P60827 252 aa31.21■■■□□ 2.59
CXXC1-216ENST00000591474 PIGBQ92521 554 aa31.21■■■□□ 2.59
CXXC1-216ENST00000591474 GRIN3BO60391 1043 aa31.2■■■□□ 2.59
CXXC1-216ENST00000591474 YBX3P16989 372 aaKnown RBP eCLIP31.2■■■□□ 2.59
CXXC1-216ENST00000591474 UBR3Q6ZT12 1888 aa31.2■■■□□ 2.58
CXXC1-216ENST00000591474 EYA1Q99502 592 aa31.19■■■□□ 2.58
CXXC1-216ENST00000591474 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.19■■■□□ 2.58
CXXC1-216ENST00000591474 AK7Q96M32 723 aa31.18■■■□□ 2.58
CXXC1-216ENST00000591474 POLKQ9UBT6 870 aa31.17■■■□□ 2.58
CXXC1-216ENST00000591474 CD2APQ9Y5K6 639 aa31.17■■■□□ 2.58
CXXC1-216ENST00000591474 CLSPNQ9HAW4 1339 aa31.16■■■□□ 2.58
CXXC1-216ENST00000591474 AMIGO3Q86WK7 504 aa31.15■■■□□ 2.58
CXXC1-216ENST00000591474 PLEKHG2Q9H7P9 1386 aa31.14■■■□□ 2.58
CXXC1-216ENST00000591474 LOC102724428A0A0B4J2F2 783 aa31.13■■■□□ 2.57
CXXC1-216ENST00000591474 SIK1P57059 783 aa31.13■■■□□ 2.57
CXXC1-216ENST00000591474 SENP3-EIF4A1A0A087X0R7 540 aa31.12■■■□□ 2.57
CXXC1-216ENST00000591474 TMOD3Q9NYL9 352 aa31.12■■■□□ 2.57
CXXC1-216ENST00000591474 GIGYF1O75420 1035 aaPredicted RBP31.11■■■□□ 2.57
CXXC1-216ENST00000591474 PHKG2P15735 406 aa31.11■■■□□ 2.57
CXXC1-216ENST00000591474 SSFA2P28290 1259 aa31.11■■■□□ 2.57
CXXC1-216ENST00000591474 IFNL2Q8IZJ0 200 aa31.11■■■□□ 2.57
CXXC1-216ENST00000591474 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.1■■■□□ 2.57
CXXC1-216ENST00000591474 PHF14O94880 888 aa31.09■■■□□ 2.57
CXXC1-216ENST00000591474 EIF4A2Q14240 407 aaKnown RBP31.09■■■□□ 2.57
CXXC1-216ENST00000591474 LINC00116Q8NCU8 138 aa31.09■■■□□ 2.57
CXXC1-216ENST00000591474 ASAP1Q9ULH1 1129 aa31.07■■■□□ 2.56
CXXC1-216ENST00000591474 SMIM5Q71RC9 77 aa31.05■■■□□ 2.56
CXXC1-216ENST00000591474 POLR3GLQ9BT43 218 aa31.05■■■□□ 2.56
CXXC1-216ENST00000591474 ITPK1Q13572 414 aa31.04■■■□□ 2.56
CXXC1-216ENST00000591474 IGSF1Q8N6C5 1336 aa31.03■■■□□ 2.56
CXXC1-216ENST00000591474 ATP6V1AP38606 617 aa31.03■■■□□ 2.56
CXXC1-216ENST00000591474 TNNT2P45379 298 aaPredicted RBP31.03■■■□□ 2.56
CXXC1-216ENST00000591474 ATG3Q9NT62 314 aa31.02■■■□□ 2.56
CXXC1-216ENST00000591474 ZNF831Q5JPB2 1677 aa31■■■□□ 2.55
CXXC1-216ENST00000591474 GNPATO15228 680 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms