RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 THSD7AQ9UPZ6 1657 aa11.93□□□□□ -0.5
NPC1-211ENST00000591075 MAP3K19Q56UN5 1328 aa11.92□□□□□ -0.5
NPC1-211ENST00000591075 ABCC6O95255 1503 aa11.92□□□□□ -0.5
NPC1-211ENST00000591075 HOXC9P31274 260 aa11.92□□□□□ -0.5
NPC1-211ENST00000591075 FBLN1P23142 703 aa11.91□□□□□ -0.5
NPC1-211ENST00000591075 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
NPC1-211ENST00000591075 OVOS2A0A0G2JMS6 1433 aa11.91□□□□□ -0.5
NPC1-211ENST00000591075 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
NPC1-211ENST00000591075 COL18A1P39060 1754 aa11.9□□□□□ -0.51
NPC1-211ENST00000591075 CC2D1BQ5T0F9 858 aaKnown RBP11.89□□□□□ -0.51
NPC1-211ENST00000591075 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
NPC1-211ENST00000591075 RTL1A6NKG5 1358 aa11.89□□□□□ -0.51
NPC1-211ENST00000591075 USP54Q70EL1 1684 aa11.88□□□□□ -0.51
NPC1-211ENST00000591075 TNNT2P45379 298 aaPredicted RBP11.88□□□□□ -0.51
NPC1-211ENST00000591075 EZH2Q15910 746 aaKnown RBP11.88□□□□□ -0.51
NPC1-211ENST00000591075 MARCH10Q8NA82 808 aaPredicted RBP11.88□□□□□ -0.51
NPC1-211ENST00000591075 RAPGEF4Q8WZA2 1011 aa11.88□□□□□ -0.51
NPC1-211ENST00000591075 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
NPC1-211ENST00000591075 LTN1O94822 1766 aa11.87□□□□□ -0.51
NPC1-211ENST00000591075 RGPD5Q99666 1765 aa11.87□□□□□ -0.51
NPC1-211ENST00000591075 RGPD1P0DJD0 1748 aa11.87□□□□□ -0.51
NPC1-211ENST00000591075 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
NPC1-211ENST00000591075 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
NPC1-211ENST00000591075 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
NPC1-211ENST00000591075 PARP4Q9UKK3 1724 aaKnown RBP11.86□□□□□ -0.51
NPC1-211ENST00000591075 HSP90AB2PQ58FF8 381 aa11.86□□□□□ -0.51
NPC1-211ENST00000591075 CFAP53Q96M91 514 aa11.86□□□□□ -0.51
NPC1-211ENST00000591075 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
NPC1-211ENST00000591075 FLT4P35916 1363 aa11.86□□□□□ -0.51
NPC1-211ENST00000591075 KAT6BQ8WYB5 2073 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 INSRP06213 1382 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 PSDA5PKW4 1024 aaPredicted RBP11.85□□□□□ -0.51
NPC1-211ENST00000591075 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
NPC1-211ENST00000591075 TATP17735 454 aaPredicted RBP11.85□□□□□ -0.51
NPC1-211ENST00000591075 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
NPC1-211ENST00000591075 ACSBG1Q96GR2 724 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 EMILIN1Q9Y6C2 1016 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 ANKRD26Q9UPS8 1709 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 DISP2A7MBM2 1401 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 TNS2Q63HR2 1409 aa11.85□□□□□ -0.51
NPC1-211ENST00000591075 R3HDM1Q15032 1099 aaKnown RBP11.84□□□□□ -0.51
NPC1-211ENST00000591075 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
NPC1-211ENST00000591075 USHBP1Q8N6Y0 703 aa11.84□□□□□ -0.51
NPC1-211ENST00000591075 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
NPC1-211ENST00000591075 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
NPC1-211ENST00000591075 KIF20BQ96Q89 1820 aa11.83□□□□□ -0.51
NPC1-211ENST00000591075 SYTL4Q96C24 671 aaPredicted RBP11.83□□□□□ -0.52
NPC1-211ENST00000591075 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
NPC1-211ENST00000591075 PLSCR1O15162 318 aa11.82□□□□□ -0.52
NPC1-211ENST00000591075 ZBTB22O15209 634 aa11.82□□□□□ -0.52
NPC1-211ENST00000591075 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
NPC1-211ENST00000591075 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
NPC1-211ENST00000591075 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
NPC1-211ENST00000591075 NUDCQ9Y266 331 aa11.81□□□□□ -0.52
NPC1-211ENST00000591075 BCL9O00512 1426 aa11.8□□□□□ -0.52
NPC1-211ENST00000591075 KCNQ2O43526 872 aa11.8□□□□□ -0.52
NPC1-211ENST00000591075 CNGB1Q14028 1251 aaPredicted RBP11.8□□□□□ -0.52
NPC1-211ENST00000591075 NGEFQ8N5V2 710 aa11.8□□□□□ -0.52
NPC1-211ENST00000591075 PNISRQ8TF01 805 aaKnown RBP11.8□□□□□ -0.52
NPC1-211ENST00000591075 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
NPC1-211ENST00000591075 STK32BQ9NY57 414 aa11.79□□□□□ -0.52
NPC1-211ENST00000591075 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
NPC1-211ENST00000591075 WNK3Q9BYP7 1800 aa11.79□□□□□ -0.52
NPC1-211ENST00000591075 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
NPC1-211ENST00000591075 MTHFSP49914 203 aa11.78□□□□□ -0.52
NPC1-211ENST00000591075 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.52
NPC1-211ENST00000591075 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
NPC1-211ENST00000591075 PTF1AQ7RTS3 328 aa11.78□□□□□ -0.52
NPC1-211ENST00000591075 MAP2P11137 1827 aaKnown RBP11.78□□□□□ -0.52
NPC1-211ENST00000591075 PCDH11XQ9BZA7 1347 aa11.78□□□□□ -0.52
NPC1-211ENST00000591075 PCDH11YQ9BZA8 1340 aa11.78□□□□□ -0.52
NPC1-211ENST00000591075 PRIM1P49642 420 aaKnown RBP11.77□□□□□ -0.53
NPC1-211ENST00000591075 EYA1Q99502 592 aa11.77□□□□□ -0.53
NPC1-211ENST00000591075 EIF4A2Q14240 407 aaKnown RBP11.76□□□□□ -0.53
NPC1-211ENST00000591075 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
NPC1-211ENST00000591075 MEGF6O75095 1541 aa11.76□□□□□ -0.53
NPC1-211ENST00000591075 PEAK1Q9H792 1746 aa11.75□□□□□ -0.53
NPC1-211ENST00000591075 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
NPC1-211ENST00000591075 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
NPC1-211ENST00000591075 PPP1R1BQ9UD71 204 aaPredicted RBP11.74□□□□□ -0.53
NPC1-211ENST00000591075 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
NPC1-211ENST00000591075 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
NPC1-211ENST00000591075 MPRIPQ6WCQ1 1025 aa11.73□□□□□ -0.53
NPC1-211ENST00000591075 SBF2Q86WG5 1849 aa11.73□□□□□ -0.53
NPC1-211ENST00000591075 FAM9BQ8IZU0 186 aa11.73□□□□□ -0.53
NPC1-211ENST00000591075 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
NPC1-211ENST00000591075 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
NPC1-211ENST00000591075 NEFMP07197 916 aa11.72□□□□□ -0.53
NPC1-211ENST00000591075 IFNL2Q8IZJ0 200 aa11.72□□□□□ -0.53
NPC1-211ENST00000591075 PROM2Q8N271 834 aa11.72□□□□□ -0.53
NPC1-211ENST00000591075 SPON1Q9HCB6 807 aa11.72□□□□□ -0.53
NPC1-211ENST00000591075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.72□□□□□ -0.53
NPC1-211ENST00000591075 POTEMA6NI47 508 aa11.71□□□□□ -0.53
NPC1-211ENST00000591075 FCHSD2O94868 740 aa11.71□□□□□ -0.53
NPC1-211ENST00000591075 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
NPC1-211ENST00000591075 SLC15A2Q16348 729 aa11.71□□□□□ -0.53
NPC1-211ENST00000591075 AMOTQ4VCS5 1084 aa11.71□□□□□ -0.53
NPC1-211ENST00000591075 CCDC184Q52MB2 194 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms