RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
SMAD4-210ENST00000590061 KIAA1468Q9P260 1216 aa10□□□□□ -0.81
SMAD4-210ENST00000590061 TSKSQ9UJT2 592 aa10□□□□□ -0.81
SMAD4-210ENST00000590061 CHD2O14647 1828 aaKnown RBP9.99□□□□□ -0.81
SMAD4-210ENST00000590061 WASLO00401 505 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-210ENST00000590061 ANP32CO43423 234 aa9.99□□□□□ -0.81
SMAD4-210ENST00000590061 MLLT3P42568 568 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-210ENST00000590061 DDX10Q13206 875 aaKnown RBP9.99□□□□□ -0.81
SMAD4-210ENST00000590061 FAM198AQ9UFP1 575 aa9.99□□□□□ -0.81
SMAD4-210ENST00000590061 QRICH2Q9H0J4 1663 aa9.99□□□□□ -0.81
SMAD4-210ENST00000590061 ASXL1Q8IXJ9 1541 aa9.98□□□□□ -0.81
SMAD4-210ENST00000590061 HDGFL2Q7Z4V5 671 aaPredicted RBP9.98□□□□□ -0.81
SMAD4-210ENST00000590061 C14orf37Q86TY3 774 aa9.98□□□□□ -0.81
SMAD4-210ENST00000590061 LAPTM4BQ86VI4 370 aa9.98□□□□□ -0.81
SMAD4-210ENST00000590061 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
SMAD4-210ENST00000590061 POLR3GLQ9BT43 218 aa9.98□□□□□ -0.81
SMAD4-210ENST00000590061 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
SMAD4-210ENST00000590061 C19orf44Q9H6X5 657 aa9.98□□□□□ -0.81
SMAD4-210ENST00000590061 WNT2BQ93097 391 aa9.97□□□□□ -0.81
SMAD4-210ENST00000590061 CDK19Q9BWU1 502 aa9.97□□□□□ -0.81
SMAD4-210ENST00000590061 KNSTRNQ9Y448 316 aa9.97□□□□□ -0.81
SMAD4-210ENST00000590061 MINK1Q8N4C8 1332 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-210ENST00000590061 ROBO2Q9HCK4 1378 aa9.97□□□□□ -0.81
SMAD4-210ENST00000590061 NWD1Q149M9 1564 aa9.97□□□□□ -0.81
SMAD4-210ENST00000590061 XRN1Q8IZH2 1706 aaKnown RBP9.96□□□□□ -0.81
SMAD4-210ENST00000590061 ATF3P18847 181 aa9.96□□□□□ -0.82
SMAD4-210ENST00000590061 WAPLQ7Z5K2 1190 aa9.96□□□□□ -0.82
SMAD4-210ENST00000590061 BRD4O60885 1362 aaPredicted RBP9.96□□□□□ -0.82
SMAD4-210ENST00000590061 DCCP43146 1447 aa9.96□□□□□ -0.82
SMAD4-210ENST00000590061 ANKARQ7Z5J8 1434 aa9.96□□□□□ -0.82
SMAD4-210ENST00000590061 ADGRB2O60241 1585 aa9.96□□□□□ -0.82
SMAD4-210ENST00000590061 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
SMAD4-210ENST00000590061 SAFB2Q14151 953 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMAD4-210ENST00000590061 RALBP1Q15311 655 aa9.95□□□□□ -0.82
SMAD4-210ENST00000590061 TMC1Q8TDI8 760 aa9.95□□□□□ -0.82
SMAD4-210ENST00000590061 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
SMAD4-210ENST00000590061 NPDC1Q9NQX5 325 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-210ENST00000590061 SEPT9Q9UHD8 586 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-210ENST00000590061 NPC1L1Q9UHC9 1359 aa9.95□□□□□ -0.82
SMAD4-210ENST00000590061 PTPRUQ92729 1446 aa9.95□□□□□ -0.82
SMAD4-210ENST00000590061 STRCQ7RTU9 1775 aa9.94□□□□□ -0.82
SMAD4-210ENST00000590061 ADGRL3Q9HAR2 1447 aa9.94□□□□□ -0.82
SMAD4-210ENST00000590061 PRSS12P56730 875 aa9.94□□□□□ -0.82
SMAD4-210ENST00000590061 TTC13Q8NBP0 860 aa9.94□□□□□ -0.82
SMAD4-210ENST00000590061 RBM27Q9P2N5 1060 aaKnown RBP9.94□□□□□ -0.82
SMAD4-210ENST00000590061 NSD2O96028 1365 aa9.93□□□□□ -0.82
SMAD4-210ENST00000590061 MSH6P52701 1360 aa9.93□□□□□ -0.82
SMAD4-210ENST00000590061 ANKRD36BQ8N2N9 1353 aa9.93□□□□□ -0.82
SMAD4-210ENST00000590061 CGNL1Q0VF96 1302 aa9.93□□□□□ -0.82
SMAD4-210ENST00000590061 PLEKHG3A1L390 1219 aa9.93□□□□□ -0.82
SMAD4-210ENST00000590061 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-210ENST00000590061 NUDT16Q96DE0 195 aaKnown RBP9.93□□□□□ -0.82
SMAD4-210ENST00000590061 ZFRQ96KR1 1074 aaKnown RBP9.93□□□□□ -0.82
SMAD4-210ENST00000590061 PANK3Q9H999 370 aa9.93□□□□□ -0.82
SMAD4-210ENST00000590061 ATP7BP35670 1465 aa9.92□□□□□ -0.82
SMAD4-210ENST00000590061 GOLGA8CPA6NN73 597 aa9.92□□□□□ -0.82
SMAD4-210ENST00000590061 FAM98CQ17RN3 349 aaKnown RBP9.92□□□□□ -0.82
SMAD4-210ENST00000590061 CDC42BPGQ6DT37 1551 aa9.92□□□□□ -0.82
SMAD4-210ENST00000590061 TULP4Q9NRJ4 1543 aa9.92□□□□□ -0.82
SMAD4-210ENST00000590061 CCER2I3L3R5 266 aa9.91□□□□□ -0.82
SMAD4-210ENST00000590061 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
SMAD4-210ENST00000590061 PTPN5P54829 565 aa9.91□□□□□ -0.82
SMAD4-210ENST00000590061 LTBP4Q8N2S1 1624 aa9.91□□□□□ -0.82
SMAD4-210ENST00000590061 PLEKHH1Q9ULM0 1364 aa9.9□□□□□ -0.82
SMAD4-210ENST00000590061 SOWAHBA6NEL2 793 aa9.9□□□□□ -0.82
SMAD4-210ENST00000590061 BCAMP50895 628 aa9.9□□□□□ -0.82
SMAD4-210ENST00000590061 ANKK1Q8NFD2 765 aa9.9□□□□□ -0.82
SMAD4-210ENST00000590061 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.82
SMAD4-210ENST00000590061 TMEM94Q12767 1356 aa9.89□□□□□ -0.83
SMAD4-210ENST00000590061 SEMA3EO15041 775 aa9.89□□□□□ -0.83
SMAD4-210ENST00000590061 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
SMAD4-210ENST00000590061 NGDNQ8NEJ9 315 aaKnown RBP9.89□□□□□ -0.83
SMAD4-210ENST00000590061 CABP1Q9NZU7 370 aa9.89□□□□□ -0.83
SMAD4-210ENST00000590061 ITSN1Q15811 1721 aa9.89□□□□□ -0.83
SMAD4-210ENST00000590061 IQSEC2Q5JU85 1478 aa9.89□□□□□ -0.83
SMAD4-210ENST00000590061 PPIP5K1Q6PFW1 1433 aa9.89□□□□□ -0.83
SMAD4-210ENST00000590061 TTC21AQ8NDW8 1320 aa9.88□□□□□ -0.83
SMAD4-210ENST00000590061 PER1O15534 1290 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-210ENST00000590061 PSME1Q06323 249 aa9.88□□□□□ -0.83
SMAD4-210ENST00000590061 SLC12A5Q9H2X9 1139 aa9.88□□□□□ -0.83
SMAD4-210ENST00000590061 PADI6Q6TGC4 694 aa9.87□□□□□ -0.83
SMAD4-210ENST00000590061 EDC4Q6P2E9 1401 aaKnown RBP9.87□□□□□ -0.83
SMAD4-210ENST00000590061 ZNF335Q9H4Z2 1342 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-210ENST00000590061 UBAP1LF5GYI3 381 aa9.86□□□□□ -0.83
SMAD4-210ENST00000590061 SMAPO00193 183 aa9.86□□□□□ -0.83
SMAD4-210ENST00000590061 PRKRIP1Q9H875 184 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-210ENST00000590061 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-210ENST00000590061 POLR3AO14802 1390 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-210ENST00000590061 CPSF1Q10570 1443 aaKnown RBP9.85□□□□□ -0.83
SMAD4-210ENST00000590061 TESPA1A2RU30 521 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-210ENST00000590061 NBPF26B4DH59 902 aa9.85□□□□□ -0.83
SMAD4-210ENST00000590061 PTGDRQ13258 359 aa9.85□□□□□ -0.83
SMAD4-210ENST00000590061 ESCO1Q5FWF5 840 aa9.85□□□□□ -0.83
SMAD4-210ENST00000590061 NLRP13Q86W25 1043 aa9.85□□□□□ -0.83
SMAD4-210ENST00000590061 TATDN2Q93075 761 aa9.85□□□□□ -0.83
SMAD4-210ENST00000590061 FMN2Q9NZ56 1722 aa9.85□□□□□ -0.83
SMAD4-210ENST00000590061 ACEP12821 1306 aa9.84□□□□□ -0.83
SMAD4-210ENST00000590061 NPHP3Q7Z494 1330 aa9.84□□□□□ -0.83
SMAD4-210ENST00000590061 MYBBP1AQ9BQG0 1328 aaKnown RBP9.84□□□□□ -0.83
SMAD4-210ENST00000590061 LRRC7Q96NW7 1537 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms