RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 GPBP1L1Q9HC44 474 aaPredicted RBP11.51□□□□□ -0.57
VAT1-207ENST00000589828 ADCY9O60503 1353 aa11.51□□□□□ -0.57
VAT1-207ENST00000589828 NSD2O96028 1365 aa11.51□□□□□ -0.57
VAT1-207ENST00000589828 USP31Q70CQ4 1352 aa11.51□□□□□ -0.57
VAT1-207ENST00000589828 RGPD5Q99666 1765 aa11.51□□□□□ -0.57
VAT1-207ENST00000589828 BTAF1O14981 1849 aa11.51□□□□□ -0.57
VAT1-207ENST00000589828 KIAA1210Q9ULL0 1709 aa11.5□□□□□ -0.57
VAT1-207ENST00000589828 KTN1Q86UP2 1357 aaKnown RBP11.5□□□□□ -0.57
VAT1-207ENST00000589828 COL24A1Q17RW2 1714 aa11.49□□□□□ -0.57
VAT1-207ENST00000589828 SYTL4Q96C24 671 aaPredicted RBP11.49□□□□□ -0.57
VAT1-207ENST00000589828 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
VAT1-207ENST00000589828 ANKRD36BQ8N2N9 1353 aa11.47□□□□□ -0.57
VAT1-207ENST00000589828 SBNO2Q9Y2G9 1366 aa11.47□□□□□ -0.57
VAT1-207ENST00000589828 KIF3CO14782 793 aa11.47□□□□□ -0.57
VAT1-207ENST00000589828 CCNL1Q9UK58 526 aaPredicted RBP11.47□□□□□ -0.57
VAT1-207ENST00000589828 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
VAT1-207ENST00000589828 WWC3Q9ULE0 1092 aa11.46□□□□□ -0.57
VAT1-207ENST00000589828 CD2APQ9Y5K6 639 aa11.46□□□□□ -0.57
VAT1-207ENST00000589828 CD163L1Q9NR16 1453 aa11.45□□□□□ -0.58
VAT1-207ENST00000589828 DNAJC5GQ8N7S2 189 aa11.45□□□□□ -0.58
VAT1-207ENST00000589828 IP6K1Q92551 441 aa11.45□□□□□ -0.58
VAT1-207ENST00000589828 L3MBTL2Q969R5 705 aa11.45□□□□□ -0.58
VAT1-207ENST00000589828 GOLGB1Q14789 3259 aaKnown RBP11.45□□□□□ -0.58
VAT1-207ENST00000589828 QSER1Q2KHR3 1735 aa11.44□□□□□ -0.58
VAT1-207ENST00000589828 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
VAT1-207ENST00000589828 SMIM5Q71RC9 77 aa11.44□□□□□ -0.58
VAT1-207ENST00000589828 AMIGO3Q86WK7 504 aa11.44□□□□□ -0.58
VAT1-207ENST00000589828 TUBGCP6Q96RT7 1819 aa11.44□□□□□ -0.58
VAT1-207ENST00000589828 FBLN1P23142 703 aa11.43□□□□□ -0.58
VAT1-207ENST00000589828 ZCRB1Q8TBF4 217 aaKnown RBP11.43□□□□□ -0.58
VAT1-207ENST00000589828 SLC12A5Q9H2X9 1139 aa11.42□□□□□ -0.58
VAT1-207ENST00000589828 IGSF1Q8N6C5 1336 aa11.41□□□□□ -0.58
VAT1-207ENST00000589828 MEGF6O75095 1541 aa11.41□□□□□ -0.58
VAT1-207ENST00000589828 USP47Q96K76 1375 aa11.41□□□□□ -0.58
VAT1-207ENST00000589828 APLP1P51693 650 aa11.4□□□□□ -0.58
VAT1-207ENST00000589828 TMC1Q8TDI8 760 aa11.4□□□□□ -0.58
VAT1-207ENST00000589828 ROCK2O75116 1388 aaKnown RBP11.4□□□□□ -0.59
VAT1-207ENST00000589828 MAP3K19Q56UN5 1328 aa11.39□□□□□ -0.59
VAT1-207ENST00000589828 HOXC9P31274 260 aa11.39□□□□□ -0.59
VAT1-207ENST00000589828 LY75O60449 1722 aa11.38□□□□□ -0.59
VAT1-207ENST00000589828 EDC4Q6P2E9 1401 aaKnown RBP11.38□□□□□ -0.59
VAT1-207ENST00000589828 COL13A1Q5TAT6 717 aaPredicted RBP11.38□□□□□ -0.59
VAT1-207ENST00000589828 NBPF6Q5VWK0 638 aa11.38□□□□□ -0.59
VAT1-207ENST00000589828 HDGFL2Q7Z4V5 671 aaPredicted RBP11.38□□□□□ -0.59
VAT1-207ENST00000589828 USHBP1Q8N6Y0 703 aa11.38□□□□□ -0.59
VAT1-207ENST00000589828 FLAD1Q8NFF5 587 aa11.38□□□□□ -0.59
VAT1-207ENST00000589828 NBPF4Q96M43 638 aa11.38□□□□□ -0.59
VAT1-207ENST00000589828 USP54Q70EL1 1684 aa11.38□□□□□ -0.59
VAT1-207ENST00000589828 HTRA3P83110 453 aa11.37□□□□□ -0.59
VAT1-207ENST00000589828 SIN3AQ96ST3 1273 aa11.37□□□□□ -0.59
VAT1-207ENST00000589828 SPINK5Q9NQ38 1064 aaPredicted RBP11.37□□□□□ -0.59
VAT1-207ENST00000589828 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
VAT1-207ENST00000589828 PALLDQ8WX93 1383 aa11.37□□□□□ -0.59
VAT1-207ENST00000589828 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
VAT1-207ENST00000589828 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
VAT1-207ENST00000589828 DOT1LQ8TEK3 1739 aa11.36□□□□□ -0.59
VAT1-207ENST00000589828 TOMM70O94826 608 aa11.36□□□□□ -0.59
VAT1-207ENST00000589828 PHF14O94880 888 aa11.36□□□□□ -0.59
VAT1-207ENST00000589828 NMRK2Q9NPI5 230 aa11.36□□□□□ -0.59
VAT1-207ENST00000589828 FAM208AQ9UK61 1670 aaKnown RBP11.36□□□□□ -0.59
VAT1-207ENST00000589828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.35□□□□□ -0.59
VAT1-207ENST00000589828 AMPHP49418 695 aa11.35□□□□□ -0.59
VAT1-207ENST00000589828 LTN1O94822 1766 aa11.34□□□□□ -0.59
VAT1-207ENST00000589828 CAPN15O75808 1086 aa11.34□□□□□ -0.59
VAT1-207ENST00000589828 CACNB1Q02641 598 aaPredicted RBP11.34□□□□□ -0.59
VAT1-207ENST00000589828 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
VAT1-207ENST00000589828 AK7Q96M32 723 aa11.34□□□□□ -0.59
VAT1-207ENST00000589828 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
VAT1-207ENST00000589828 CYP27B1O15528 508 aa11.33□□□□□ -0.6
VAT1-207ENST00000589828 RRS1Q15050 365 aaKnown RBP11.33□□□□□ -0.6
VAT1-207ENST00000589828 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
VAT1-207ENST00000589828 JMYQ8N9B5 988 aa11.32□□□□□ -0.6
VAT1-207ENST00000589828 RAPGEF4Q8WZA2 1011 aa11.32□□□□□ -0.6
VAT1-207ENST00000589828 PIGBQ92521 554 aa11.32□□□□□ -0.6
VAT1-207ENST00000589828 KLRG1Q96E93 195 aa11.32□□□□□ -0.6
VAT1-207ENST00000589828 COG3Q96JB2 828 aa11.32□□□□□ -0.6
VAT1-207ENST00000589828 CGNL1Q0VF96 1302 aa11.32□□□□□ -0.6
VAT1-207ENST00000589828 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
VAT1-207ENST00000589828 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
VAT1-207ENST00000589828 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
VAT1-207ENST00000589828 MMP10P09238 476 aa11.31□□□□□ -0.6
VAT1-207ENST00000589828 TATP17735 454 aaPredicted RBP11.31□□□□□ -0.6
VAT1-207ENST00000589828 SSFA2P28290 1259 aa11.31□□□□□ -0.6
VAT1-207ENST00000589828 ITPK1Q13572 414 aa11.31□□□□□ -0.6
VAT1-207ENST00000589828 BCS1LQ9Y276 419 aa11.31□□□□□ -0.6
VAT1-207ENST00000589828 TOGARAM1Q9Y4F4 1720 aa11.3□□□□□ -0.6
VAT1-207ENST00000589828 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
VAT1-207ENST00000589828 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
VAT1-207ENST00000589828 SMARCC1Q92922 1105 aaPredicted RBP11.3□□□□□ -0.6
VAT1-207ENST00000589828 PCDH11XQ9BZA7 1347 aa11.3□□□□□ -0.6
VAT1-207ENST00000589828 PCDH11YQ9BZA8 1340 aa11.3□□□□□ -0.6
VAT1-207ENST00000589828 LOC102724428A0A0B4J2F2 783 aa11.29□□□□□ -0.6
VAT1-207ENST00000589828 SIK1P57059 783 aa11.29□□□□□ -0.6
VAT1-207ENST00000589828 HSP90AB2PQ58FF8 381 aa11.29□□□□□ -0.6
VAT1-207ENST00000589828 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
VAT1-207ENST00000589828 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
VAT1-207ENST00000589828 CARD11Q9BXL7 1154 aa11.29□□□□□ -0.6
VAT1-207ENST00000589828 C5P01031 1676 aa11.29□□□□□ -0.6
VAT1-207ENST00000589828 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
VAT1-207ENST00000589828 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms