RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 COL24A1Q17RW2 1714 aa23.57■■□□□ 1.36
SEC11C-205ENST00000588875 GIGYF1O75420 1035 aaPredicted RBP23.57■■□□□ 1.36
SEC11C-205ENST00000588875 HOXC9P31274 260 aa23.57■■□□□ 1.36
SEC11C-205ENST00000588875 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
SEC11C-205ENST00000588875 PUS7Q96PZ0 661 aaKnown RBP23.57■■□□□ 1.36
SEC11C-205ENST00000588875 QSER1Q2KHR3 1735 aa23.56■■□□□ 1.36
SEC11C-205ENST00000588875 CCNL1Q9UK58 526 aaPredicted RBP23.55■■□□□ 1.36
SEC11C-205ENST00000588875 YBX3P16989 372 aaKnown RBP eCLIP23.54■■□□□ 1.36
SEC11C-205ENST00000588875 COL23A1Q86Y22 540 aaPredicted RBP23.54■■□□□ 1.36
SEC11C-205ENST00000588875 AMPHP49418 695 aa23.53■■□□□ 1.36
SEC11C-205ENST00000588875 COG3Q96JB2 828 aa23.53■■□□□ 1.36
SEC11C-205ENST00000588875 TUBGCP6Q96RT7 1819 aa23.52■■□□□ 1.36
SEC11C-205ENST00000588875 MEGF6O75095 1541 aa23.52■■□□□ 1.36
SEC11C-205ENST00000588875 MSH5O43196 834 aa23.51■■□□□ 1.35
SEC11C-205ENST00000588875 GRIN3BO60391 1043 aa23.5■■□□□ 1.35
SEC11C-205ENST00000588875 NBPF6Q5VWK0 638 aa23.5■■□□□ 1.35
SEC11C-205ENST00000588875 NBPF4Q96M43 638 aa23.5■■□□□ 1.35
SEC11C-205ENST00000588875 TESK2Q96S53 571 aa23.5■■□□□ 1.35
SEC11C-205ENST00000588875 FAM208AQ9UK61 1670 aaKnown RBP23.5■■□□□ 1.35
SEC11C-205ENST00000588875 LY75O60449 1722 aa23.49■■□□□ 1.35
SEC11C-205ENST00000588875 DOT1LQ8TEK3 1739 aa23.49■■□□□ 1.35
SEC11C-205ENST00000588875 SHANK3Q9BYB0 1731 aa23.48■■□□□ 1.35
SEC11C-205ENST00000588875 MSL1Q68DK7 614 aa23.48■■□□□ 1.35
SEC11C-205ENST00000588875 CEP350Q5VT06 3117 aa23.48■■□□□ 1.35
SEC11C-205ENST00000588875 USHBP1Q8N6Y0 703 aa23.47■■□□□ 1.35
SEC11C-205ENST00000588875 USP47Q96K76 1375 aa23.47■■□□□ 1.35
SEC11C-205ENST00000588875 RRS1Q15050 365 aaKnown RBP23.46■■□□□ 1.35
SEC11C-205ENST00000588875 ST20-MTHFSA0A0A6YYL1 179 aa23.45■■□□□ 1.34
SEC11C-205ENST00000588875 RGPD2P0DJD1 1756 aa23.44■■□□□ 1.34
SEC11C-205ENST00000588875 CGNL1Q0VF96 1302 aa23.42■■□□□ 1.34
SEC11C-205ENST00000588875 FYB1O15117 783 aa23.42■■□□□ 1.34
SEC11C-205ENST00000588875 RTL1A6NKG5 1358 aa23.41■■□□□ 1.34
SEC11C-205ENST00000588875 RAPGEF4Q8WZA2 1011 aa23.41■■□□□ 1.34
SEC11C-205ENST00000588875 CD2APQ9Y5K6 639 aa23.41■■□□□ 1.34
SEC11C-205ENST00000588875 IFFO2Q5TF58 517 aa23.4■■□□□ 1.34
SEC11C-205ENST00000588875 GGNBP2Q9H3C7 697 aa23.4■■□□□ 1.34
SEC11C-205ENST00000588875 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.33
SEC11C-205ENST00000588875 ATP10DQ9P241 1426 aa23.39■■□□□ 1.33
SEC11C-205ENST00000588875 HSP90AB2PQ58FF8 381 aa23.38■■□□□ 1.33
SEC11C-205ENST00000588875 MPRIPQ6WCQ1 1025 aa23.38■■□□□ 1.33
SEC11C-205ENST00000588875 TONSLQ96HA7 1378 aa23.38■■□□□ 1.33
SEC11C-205ENST00000588875 AMIGO3Q86WK7 504 aa23.37■■□□□ 1.33
SEC11C-205ENST00000588875 FLAD1Q8NFF5 587 aa23.37■■□□□ 1.33
SEC11C-205ENST00000588875 PALLDQ8WX93 1383 aa23.37■■□□□ 1.33
SEC11C-205ENST00000588875 CYP27B1O15528 508 aa23.36■■□□□ 1.33
SEC11C-205ENST00000588875 SMIM5Q71RC9 77 aa23.35■■□□□ 1.33
SEC11C-205ENST00000588875 PCDH11XQ9BZA7 1347 aa23.34■■□□□ 1.33
SEC11C-205ENST00000588875 PCDH11YQ9BZA8 1340 aa23.34■■□□□ 1.33
SEC11C-205ENST00000588875 SLC24A1O60721 1099 aa23.34■■□□□ 1.33
SEC11C-205ENST00000588875 INSRP06213 1382 aa23.34■■□□□ 1.33
SEC11C-205ENST00000588875 SMG6Q86US8 1419 aaKnown RBP23.33■■□□□ 1.33
SEC11C-205ENST00000588875 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
SEC11C-205ENST00000588875 GPBP1L1Q9HC44 474 aaPredicted RBP23.33■■□□□ 1.33
SEC11C-205ENST00000588875 C5P01031 1676 aa23.32■■□□□ 1.32
SEC11C-205ENST00000588875 ADCY9O60503 1353 aa23.31■■□□□ 1.32
SEC11C-205ENST00000588875 HMGB2P26583 209 aaKnown RBP23.31■■□□□ 1.32
SEC11C-205ENST00000588875 ZNF526Q8TF50 670 aaPredicted RBP23.3■■□□□ 1.32
SEC11C-205ENST00000588875 PIGBQ92521 554 aa23.3■■□□□ 1.32
SEC11C-205ENST00000588875 SMARCC1Q92922 1105 aaPredicted RBP23.3■■□□□ 1.32
SEC11C-205ENST00000588875 AK7Q96M32 723 aa23.3■■□□□ 1.32
SEC11C-205ENST00000588875 PHF14O94880 888 aa23.29■■□□□ 1.32
SEC11C-205ENST00000588875 WWC3Q9ULE0 1092 aa23.29■■□□□ 1.32
SEC11C-205ENST00000588875 FLT4P35916 1363 aa23.28■■□□□ 1.32
SEC11C-205ENST00000588875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.28■■□□□ 1.32
SEC11C-205ENST00000588875 IGSF1Q8N6C5 1336 aa23.28■■□□□ 1.32
SEC11C-205ENST00000588875 TAF1LQ8IZX4 1826 aa23.27■■□□□ 1.32
SEC11C-205ENST00000588875 C4BP0C0L5 1744 aa23.26■■□□□ 1.31
SEC11C-205ENST00000588875 HSPA6P17066 643 aa23.26■■□□□ 1.31
SEC11C-205ENST00000588875 TMF1P82094 1093 aa23.26■■□□□ 1.31
SEC11C-205ENST00000588875 NKX1-1Q15270 411 aaPredicted RBP23.26■■□□□ 1.31
SEC11C-205ENST00000588875 EMILIN1Q9Y6C2 1016 aa23.26■■□□□ 1.31
SEC11C-205ENST00000588875 KIF24Q5T7B8 1368 aa23.26■■□□□ 1.31
SEC11C-205ENST00000588875 LINC00116Q8NCU8 138 aa23.25■■□□□ 1.31
SEC11C-205ENST00000588875 TOGARAM1Q9Y4F4 1720 aa23.25■■□□□ 1.31
SEC11C-205ENST00000588875 CARD14Q9BXL6 1004 aa23.24■■□□□ 1.31
SEC11C-205ENST00000588875 LOC102724428A0A0B4J2F2 783 aa23.23■■□□□ 1.31
SEC11C-205ENST00000588875 SSFA2P28290 1259 aa23.23■■□□□ 1.31
SEC11C-205ENST00000588875 SIK1P57059 783 aa23.23■■□□□ 1.31
SEC11C-205ENST00000588875 ITPK1Q13572 414 aa23.21■■□□□ 1.31
SEC11C-205ENST00000588875 ITGB4P16144 1822 aa23.2■■□□□ 1.3
SEC11C-205ENST00000588875 NCAPD2Q15021 1401 aa23.2■■□□□ 1.3
SEC11C-205ENST00000588875 ASAP1Q9ULH1 1129 aa23.2■■□□□ 1.3
SEC11C-205ENST00000588875 SPG7Q9UQ90 795 aa23.2■■□□□ 1.3
SEC11C-205ENST00000588875 UBR3Q6ZT12 1888 aa23.19■■□□□ 1.3
SEC11C-205ENST00000588875 KIF3CO14782 793 aa23.19■■□□□ 1.3
SEC11C-205ENST00000588875 NSD3Q9BZ95 1437 aa23.18■■□□□ 1.3
SEC11C-205ENST00000588875 GNPATO15228 680 aa23.18■■□□□ 1.3
SEC11C-205ENST00000588875 PPM1GO15355 546 aaPredicted RBP23.18■■□□□ 1.3
SEC11C-205ENST00000588875 TMOD3Q9NYL9 352 aa23.18■■□□□ 1.3
SEC11C-205ENST00000588875 MAP2P11137 1827 aaKnown RBP23.17■■□□□ 1.3
SEC11C-205ENST00000588875 PKD1L3Q7Z443 1732 aa23.17■■□□□ 1.3
SEC11C-205ENST00000588875 EYA1Q99502 592 aa23.17■■□□□ 1.3
SEC11C-205ENST00000588875 ATP6V1AP38606 617 aa23.16■■□□□ 1.3
SEC11C-205ENST00000588875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.3
SEC11C-205ENST00000588875 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
SEC11C-205ENST00000588875 MMP10P09238 476 aa23.15■■□□□ 1.3
SEC11C-205ENST00000588875 ATG3Q9NT62 314 aa23.15■■□□□ 1.3
SEC11C-205ENST00000588875 PHKG2P15735 406 aa23.14■■□□□ 1.29
SEC11C-205ENST00000588875 CDCA8Q53HL2 280 aa23.14■■□□□ 1.29
SEC11C-205ENST00000588875 KIF20BQ96Q89 1820 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms