RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 KDRP35968 1356 aa20.76■□□□□ 0.91
GHDC-209ENST00000588762 HMOX1P09601 288 aa20.76■□□□□ 0.91
GHDC-209ENST00000588762 AEBP1Q8IUX7 1158 aa20.76■□□□□ 0.91
GHDC-209ENST00000588762 SHANK3Q9BYB0 1731 aa20.75■□□□□ 0.91
GHDC-209ENST00000588762 SPG7Q9UQ90 795 aa20.75■□□□□ 0.91
GHDC-209ENST00000588762 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
GHDC-209ENST00000588762 PLEKHG2Q9H7P9 1386 aa20.74■□□□□ 0.91
GHDC-209ENST00000588762 U2AF1L5P0DN76 240 aaPredicted RBP20.74■□□□□ 0.91
GHDC-209ENST00000588762 U2AF1Q01081 240 aaKnown RBP eCLIP20.74■□□□□ 0.91
GHDC-209ENST00000588762 FAM182BQ5T319 152 aa20.74■□□□□ 0.91
GHDC-209ENST00000588762 DDX54Q8TDD1 881 aaKnown RBP20.74■□□□□ 0.91
GHDC-209ENST00000588762 MARCH10Q8NA82 808 aaPredicted RBP20.73■□□□□ 0.91
GHDC-209ENST00000588762 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.73■□□□□ 0.91
GHDC-209ENST00000588762 FAM196AQ6ZSG2 479 aa20.72■□□□□ 0.91
GHDC-209ENST00000588762 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
GHDC-209ENST00000588762 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
GHDC-209ENST00000588762 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
GHDC-209ENST00000588762 SBF2Q86WG5 1849 aa20.71■□□□□ 0.91
GHDC-209ENST00000588762 EP400Q96L91 3159 aa20.71■□□□□ 0.91
GHDC-209ENST00000588762 AMOTQ4VCS5 1084 aa20.7■□□□□ 0.9
GHDC-209ENST00000588762 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
GHDC-209ENST00000588762 FCHSD2O94868 740 aa20.68■□□□□ 0.9
GHDC-209ENST00000588762 WDR43Q15061 677 aaKnown RBP eCLIP20.68■□□□□ 0.9
GHDC-209ENST00000588762 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
GHDC-209ENST00000588762 PRKAR2BP31323 418 aa20.66■□□□□ 0.9
GHDC-209ENST00000588762 PNNQ9H307 717 aaKnown RBP20.66■□□□□ 0.9
GHDC-209ENST00000588762 BCL9O00512 1426 aa20.66■□□□□ 0.9
GHDC-209ENST00000588762 CYP27B1O15528 508 aa20.65■□□□□ 0.9
GHDC-209ENST00000588762 NEFMP07197 916 aa20.65■□□□□ 0.9
GHDC-209ENST00000588762 ZNF530Q6P9A1 599 aaPredicted RBP20.65■□□□□ 0.9
GHDC-209ENST00000588762 IFNL2Q8IZJ0 200 aa20.65■□□□□ 0.9
GHDC-209ENST00000588762 SOCS7O14512 581 aa20.64■□□□□ 0.89
GHDC-209ENST00000588762 C1orf141Q5JVX7 400 aa20.64■□□□□ 0.89
GHDC-209ENST00000588762 MRS2Q9HD23 443 aa20.64■□□□□ 0.89
GHDC-209ENST00000588762 DOT1LQ8TEK3 1739 aa20.64■□□□□ 0.89
GHDC-209ENST00000588762 PHKG2P15735 406 aa20.63■□□□□ 0.89
GHDC-209ENST00000588762 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
GHDC-209ENST00000588762 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
GHDC-209ENST00000588762 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
GHDC-209ENST00000588762 TRIM37O94972 964 aa20.62■□□□□ 0.89
GHDC-209ENST00000588762 SF3B2Q13435 895 aaKnown RBP20.62■□□□□ 0.89
GHDC-209ENST00000588762 CCDC184Q52MB2 194 aa20.62■□□□□ 0.89
GHDC-209ENST00000588762 UPF1Q92900 1129 aaKnown RBP eCLIP20.62■□□□□ 0.89
GHDC-209ENST00000588762 HSP90AB1P08238 724 aaKnown RBP20.61■□□□□ 0.89
GHDC-209ENST00000588762 TNS1Q9HBL0 1735 aaKnown RBP20.61■□□□□ 0.89
GHDC-209ENST00000588762 NKX1-1Q15270 411 aaPredicted RBP20.6■□□□□ 0.89
GHDC-209ENST00000588762 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
GHDC-209ENST00000588762 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
GHDC-209ENST00000588762 ACSBG1Q96GR2 724 aa20.6■□□□□ 0.89
GHDC-209ENST00000588762 ITGB4P16144 1822 aa20.6■□□□□ 0.89
GHDC-209ENST00000588762 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
GHDC-209ENST00000588762 AKAP4Q5JQC9 854 aa20.59■□□□□ 0.89
GHDC-209ENST00000588762 PHACTR3Q96KR7 559 aa20.59■□□□□ 0.89
GHDC-209ENST00000588762 BCL11BQ9C0K0 894 aaPredicted RBP20.59■□□□□ 0.89
GHDC-209ENST00000588762 ADAMTS8Q9UP79 889 aa20.58■□□□□ 0.89
GHDC-209ENST00000588762 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.89
GHDC-209ENST00000588762 TOGARAM1Q9Y4F4 1720 aa20.58■□□□□ 0.88
GHDC-209ENST00000588762 BTAF1O14981 1849 aa20.57■□□□□ 0.88
GHDC-209ENST00000588762 SYTL4Q96C24 671 aaPredicted RBP20.57■□□□□ 0.88
GHDC-209ENST00000588762 DCAF5Q96JK2 942 aa20.57■□□□□ 0.88
GHDC-209ENST00000588762 PLEKHF1Q96S99 279 aa20.57■□□□□ 0.88
GHDC-209ENST00000588762 DLG5Q8TDM6 1919 aa20.57■□□□□ 0.88
GHDC-209ENST00000588762 PRIM1P49642 420 aaKnown RBP20.56■□□□□ 0.88
GHDC-209ENST00000588762 KCNQ2O43526 872 aa20.55■□□□□ 0.88
GHDC-209ENST00000588762 APBA3O96018 575 aa20.55■□□□□ 0.88
GHDC-209ENST00000588762 PNISRQ8TF01 805 aaKnown RBP20.55■□□□□ 0.88
GHDC-209ENST00000588762 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
GHDC-209ENST00000588762 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
GHDC-209ENST00000588762 MPRIPQ6WCQ1 1025 aa20.54■□□□□ 0.88
GHDC-209ENST00000588762 CCER2I3L3R5 266 aa20.53■□□□□ 0.88
GHDC-209ENST00000588762 BAG6P46379 1132 aa20.53■□□□□ 0.88
GHDC-209ENST00000588762 CCDC146Q8IYE0 955 aa20.53■□□□□ 0.88
GHDC-209ENST00000588762 RUNDC1Q96C34 613 aa20.53■□□□□ 0.88
GHDC-209ENST00000588762 KDM6AO15550 1401 aaPredicted RBP20.53■□□□□ 0.88
GHDC-209ENST00000588762 ERVV-2B6SEH9 535 aa20.52■□□□□ 0.88
GHDC-209ENST00000588762 PTF1AQ7RTS3 328 aa20.52■□□□□ 0.88
GHDC-209ENST00000588762 NFE2L2Q16236 605 aa20.51■□□□□ 0.87
GHDC-209ENST00000588762 MIER1Q8N108 512 aa20.51■□□□□ 0.87
GHDC-209ENST00000588762 RTF1Q92541 710 aaKnown RBP20.51■□□□□ 0.87
GHDC-209ENST00000588762 TMOD3Q9NYL9 352 aa20.51■□□□□ 0.87
GHDC-209ENST00000588762 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
GHDC-209ENST00000588762 RGPD3A6NKT7 1758 aaPredicted RBP20.5■□□□□ 0.87
GHDC-209ENST00000588762 RGPD4Q7Z3J3 1758 aa20.5■□□□□ 0.87
GHDC-209ENST00000588762 CABP4P57796 275 aa20.5■□□□□ 0.87
GHDC-209ENST00000588762 RNMTO43148 476 aaKnown RBP20.49■□□□□ 0.87
GHDC-209ENST00000588762 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
GHDC-209ENST00000588762 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
GHDC-209ENST00000588762 DEFB132Q7Z7B7 95 aa20.48■□□□□ 0.87
GHDC-209ENST00000588762 FAM9BQ8IZU0 186 aa20.48■□□□□ 0.87
GHDC-209ENST00000588762 PLSCR1O15162 318 aa20.47■□□□□ 0.87
GHDC-209ENST00000588762 EN1Q05925 392 aaPredicted RBP20.47■□□□□ 0.87
GHDC-209ENST00000588762 PIGBQ92521 554 aa20.47■□□□□ 0.87
GHDC-209ENST00000588762 TMPOP42166 694 aaKnown RBP20.46■□□□□ 0.87
GHDC-209ENST00000588762 TEFQ10587 303 aa20.46■□□□□ 0.87
GHDC-209ENST00000588762 RIPK4P57078 832 aa20.45■□□□□ 0.86
GHDC-209ENST00000588762 NFATC2IPQ8NCF5 419 aa20.45■□□□□ 0.86
GHDC-209ENST00000588762 IL17REQ8NFR9 667 aa20.45■□□□□ 0.86
GHDC-209ENST00000588762 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
GHDC-209ENST00000588762 MRC1P22897 1456 aa20.44■□□□□ 0.86
GHDC-209ENST00000588762 SIPA1L3O60292 1781 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms