RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 NLRP13Q86W25 1043 aa10.7□□□□□ -0.7
TPM4-210ENST00000588507 BEGAINQ9BUH8 593 aa10.7□□□□□ -0.7
TPM4-210ENST00000588507 POGKQ9P215 609 aa10.7□□□□□ -0.7
TPM4-210ENST00000588507 CCNL1Q9UK58 526 aaPredicted RBP10.7□□□□□ -0.7
TPM4-210ENST00000588507 COL18A1P39060 1754 aa10.7□□□□□ -0.7
TPM4-210ENST00000588507 VPS8Q8N3P4 1428 aa10.69□□□□□ -0.7
TPM4-210ENST00000588507 A0A0G2JLW4 131 aa10.69□□□□□ -0.7
TPM4-210ENST00000588507 GLTPD2A6NH11 291 aa10.69□□□□□ -0.7
TPM4-210ENST00000588507 SOX10P56693 466 aa10.69□□□□□ -0.7
TPM4-210ENST00000588507 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
TPM4-210ENST00000588507 ZC3H4Q9UPT8 1303 aaKnown RBP10.68□□□□□ -0.7
TPM4-210ENST00000588507 CSB-PGBD3P0DP91 1061 aa10.68□□□□□ -0.7
TPM4-210ENST00000588507 DGKZQ13574 1117 aa10.67□□□□□ -0.7
TPM4-210ENST00000588507 NBPF15Q8N660 670 aa10.67□□□□□ -0.7
TPM4-210ENST00000588507 ZNF219Q9P2Y4 722 aaPredicted RBP10.67□□□□□ -0.7
TPM4-210ENST00000588507 WDR33Q9C0J8 1336 aaKnown RBP10.66□□□□□ -0.7
TPM4-210ENST00000588507 TMEM88BA6NKF7 163 aa10.66□□□□□ -0.7
TPM4-210ENST00000588507 FXR1P51114 621 aaKnown RBP eCLIP10.66□□□□□ -0.7
TPM4-210ENST00000588507 DEFB115Q30KQ5 88 aa10.66□□□□□ -0.7
TPM4-210ENST00000588507 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
TPM4-210ENST00000588507 ABCC6O95255 1503 aa10.66□□□□□ -0.7
TPM4-210ENST00000588507 CCDC7Q96M83 1385 aa10.65□□□□□ -0.7
TPM4-210ENST00000588507 HMGB2P26583 209 aaKnown RBP10.65□□□□□ -0.7
TPM4-210ENST00000588507 PPIP5K1Q6PFW1 1433 aa10.65□□□□□ -0.7
TPM4-210ENST00000588507 SPATA31E1Q6ZUB1 1445 aa10.65□□□□□ -0.7
TPM4-210ENST00000588507 POTECB2RU33 542 aa10.64□□□□□ -0.71
TPM4-210ENST00000588507 WASLO00401 505 aaPredicted RBP10.64□□□□□ -0.71
TPM4-210ENST00000588507 DPEP1P16444 411 aa10.64□□□□□ -0.71
TPM4-210ENST00000588507 N4BP2Q86UW6 1770 aaPredicted RBP10.64□□□□□ -0.71
TPM4-210ENST00000588507 PASKQ96RG2 1323 aa10.63□□□□□ -0.71
TPM4-210ENST00000588507 RASSF10A6NK89 507 aa10.63□□□□□ -0.71
TPM4-210ENST00000588507 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
TPM4-210ENST00000588507 SYTL4Q96C24 671 aaPredicted RBP10.63□□□□□ -0.71
TPM4-210ENST00000588507 DCAF5Q96JK2 942 aa10.63□□□□□ -0.71
TPM4-210ENST00000588507 LY75O60449 1722 aa10.63□□□□□ -0.71
TPM4-210ENST00000588507 MINK1Q8N4C8 1332 aaPredicted RBP10.62□□□□□ -0.71
TPM4-210ENST00000588507 FAM50AQ14320 339 aaKnown RBP10.62□□□□□ -0.71
TPM4-210ENST00000588507 KIAA1551Q9HCM1 1747 aa10.61□□□□□ -0.71
TPM4-210ENST00000588507 ERBB3P21860 1342 aa10.61□□□□□ -0.71
TPM4-210ENST00000588507 PRIM1P49642 420 aaKnown RBP10.61□□□□□ -0.71
TPM4-210ENST00000588507 TSKSQ9UJT2 592 aa10.61□□□□□ -0.71
TPM4-210ENST00000588507 SBF1O95248 1867 aa10.61□□□□□ -0.71
TPM4-210ENST00000588507 KIF13BQ9NQT8 1826 aa10.61□□□□□ -0.71
TPM4-210ENST00000588507 ACEP12821 1306 aa10.6□□□□□ -0.71
TPM4-210ENST00000588507 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
TPM4-210ENST00000588507 NUDT16Q96DE0 195 aaKnown RBP10.6□□□□□ -0.71
TPM4-210ENST00000588507 PIM2Q9P1W9 311 aa10.6□□□□□ -0.71
TPM4-210ENST00000588507 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
TPM4-210ENST00000588507 ARFGEF1Q9Y6D6 1849 aa10.6□□□□□ -0.71
TPM4-210ENST00000588507 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
TPM4-210ENST00000588507 IL2RBP14784 551 aa10.59□□□□□ -0.71
TPM4-210ENST00000588507 DALRD3Q5D0E6 543 aaKnown RBP10.59□□□□□ -0.71
TPM4-210ENST00000588507 DPY19L2Q6NUT2 758 aa10.59□□□□□ -0.71
TPM4-210ENST00000588507 C14orf93Q9H972 538 aaKnown RBP10.59□□□□□ -0.71
TPM4-210ENST00000588507 POLR3AO14802 1390 aaPredicted RBP10.59□□□□□ -0.71
TPM4-210ENST00000588507 CASP8AP2Q9UKL3 1982 aa10.59□□□□□ -0.71
TPM4-210ENST00000588507 PIK3C2GO75747 1445 aa10.58□□□□□ -0.72
TPM4-210ENST00000588507 PHF14O94880 888 aa10.58□□□□□ -0.72
TPM4-210ENST00000588507 MMP10P09238 476 aa10.58□□□□□ -0.72
TPM4-210ENST00000588507 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
TPM4-210ENST00000588507 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
TPM4-210ENST00000588507 KCNA3P22001 575 aa10.58□□□□□ -0.72
TPM4-210ENST00000588507 ANKRD36BQ8N2N9 1353 aa10.57□□□□□ -0.72
TPM4-210ENST00000588507 CA12O43570 354 aa10.57□□□□□ -0.72
TPM4-210ENST00000588507 LMNB1P20700 586 aa10.57□□□□□ -0.72
TPM4-210ENST00000588507 MPNDQ8N594 471 aa10.57□□□□□ -0.72
TPM4-210ENST00000588507 AK7Q96M32 723 aa10.57□□□□□ -0.72
TPM4-210ENST00000588507 ROCK1Q13464 1354 aa10.56□□□□□ -0.72
TPM4-210ENST00000588507 USP47Q96K76 1375 aa10.56□□□□□ -0.72
TPM4-210ENST00000588507 BRCA1P38398 1863 aaKnown RBP10.56□□□□□ -0.72
TPM4-210ENST00000588507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
TPM4-210ENST00000588507 NLRP6P59044 892 aa10.56□□□□□ -0.72
TPM4-210ENST00000588507 RGL3Q3MIN7 710 aa10.56□□□□□ -0.72
TPM4-210ENST00000588507 DDX54Q8TDD1 881 aaKnown RBP10.56□□□□□ -0.72
TPM4-210ENST00000588507 CCDC87Q9NVE4 849 aa10.56□□□□□ -0.72
TPM4-210ENST00000588507 KDM6AO15550 1401 aaPredicted RBP10.56□□□□□ -0.72
TPM4-210ENST00000588507 NSD2O96028 1365 aa10.55□□□□□ -0.72
TPM4-210ENST00000588507 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
TPM4-210ENST00000588507 ECE1P42892 770 aa10.55□□□□□ -0.72
TPM4-210ENST00000588507 RASSF7Q02833 373 aa10.55□□□□□ -0.72
TPM4-210ENST00000588507 AMIGO3Q86WK7 504 aa10.55□□□□□ -0.72
TPM4-210ENST00000588507 GPR101Q96P66 508 aaPredicted RBP10.55□□□□□ -0.72
TPM4-210ENST00000588507 ABT1Q9ULW3 272 aaKnown RBP10.55□□□□□ -0.72
TPM4-210ENST00000588507 CPSF1Q10570 1443 aaKnown RBP10.55□□□□□ -0.72
TPM4-210ENST00000588507 C5P01031 1676 aa10.54□□□□□ -0.72
TPM4-210ENST00000588507 PLEKHG3A1L390 1219 aa10.54□□□□□ -0.72
TPM4-210ENST00000588507 MNX1P50219 401 aaPredicted RBP10.54□□□□□ -0.72
TPM4-210ENST00000588507 CFAP70Q5T0N1 1121 aa10.54□□□□□ -0.72
TPM4-210ENST00000588507 ARHGEF25Q86VW2 580 aa10.54□□□□□ -0.72
TPM4-210ENST00000588507 LDHDQ86WU2 507 aa10.54□□□□□ -0.72
TPM4-210ENST00000588507 CAPNS2Q96L46 248 aa10.54□□□□□ -0.72
TPM4-210ENST00000588507 NSD3Q9BZ95 1437 aa10.54□□□□□ -0.72
TPM4-210ENST00000588507 ADAMTS7Q9UKP4 1686 aa10.53□□□□□ -0.72
TPM4-210ENST00000588507 SSFA2P28290 1259 aa10.53□□□□□ -0.72
TPM4-210ENST00000588507 NLRP2Q9NX02 1062 aa10.53□□□□□ -0.72
TPM4-210ENST00000588507 SLIT3O75094 1523 aa10.53□□□□□ -0.72
TPM4-210ENST00000588507 RGPD5Q99666 1765 aa10.52□□□□□ -0.72
TPM4-210ENST00000588507 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
TPM4-210ENST00000588507 THSD7BQ9C0I4 1608 aa10.51□□□□□ -0.73
TPM4-210ENST00000588507 LTBP1Q14766 1721 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms