RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 IP6K1Q92551 441 aa21.73■■□□□ 1.07
IFT20-216ENST00000588477 PRIM1P49642 420 aaKnown RBP21.72■■□□□ 1.07
IFT20-216ENST00000588477 CARD11Q9BXL7 1154 aa21.71■■□□□ 1.07
IFT20-216ENST00000588477 TERF2IPQ9NYB0 399 aa21.71■■□□□ 1.07
IFT20-216ENST00000588477 A0A1W2PP64 1363 aa21.71■■□□□ 1.07
IFT20-216ENST00000588477 ANKRD36BQ8N2N9 1353 aa21.7■■□□□ 1.06
IFT20-216ENST00000588477 NSD2O96028 1365 aa21.67■■□□□ 1.06
IFT20-216ENST00000588477 MSH5O43196 834 aa21.67■■□□□ 1.06
IFT20-216ENST00000588477 TAF1LQ8IZX4 1826 aa21.66■■□□□ 1.06
IFT20-216ENST00000588477 ZCRB1Q8TBF4 217 aaKnown RBP21.66■■□□□ 1.06
IFT20-216ENST00000588477 CCNL1Q9UK58 526 aaPredicted RBP21.66■■□□□ 1.06
IFT20-216ENST00000588477 C5P01031 1676 aa21.66■■□□□ 1.06
IFT20-216ENST00000588477 YBX3P16989 372 aaKnown RBP eCLIP21.65■■□□□ 1.06
IFT20-216ENST00000588477 FBLN1P23142 703 aa21.65■■□□□ 1.06
IFT20-216ENST00000588477 HOXC9P31274 260 aa21.65■■□□□ 1.06
IFT20-216ENST00000588477 AMPHP49418 695 aa21.64■■□□□ 1.05
IFT20-216ENST00000588477 COL23A1Q86Y22 540 aaPredicted RBP21.64■■□□□ 1.05
IFT20-216ENST00000588477 MAP3K19Q56UN5 1328 aa21.63■■□□□ 1.05
IFT20-216ENST00000588477 GRIN3BO60391 1043 aa21.63■■□□□ 1.05
IFT20-216ENST00000588477 COG3Q96JB2 828 aa21.63■■□□□ 1.05
IFT20-216ENST00000588477 MEGF6O75095 1541 aa21.63■■□□□ 1.05
IFT20-216ENST00000588477 CEP350Q5VT06 3117 aa21.63■■□□□ 1.05
IFT20-216ENST00000588477 USP47Q96K76 1375 aa21.61■■□□□ 1.05
IFT20-216ENST00000588477 PUS7Q96PZ0 661 aaKnown RBP21.61■■□□□ 1.05
IFT20-216ENST00000588477 ITGB4P16144 1822 aa21.6■■□□□ 1.05
IFT20-216ENST00000588477 MSL1Q68DK7 614 aa21.6■■□□□ 1.05
IFT20-216ENST00000588477 IFFO2Q5TF58 517 aa21.59■■□□□ 1.05
IFT20-216ENST00000588477 NBPF6Q5VWK0 638 aa21.57■■□□□ 1.04
IFT20-216ENST00000588477 NBPF4Q96M43 638 aa21.57■■□□□ 1.04
IFT20-216ENST00000588477 USHBP1Q8N6Y0 703 aa21.56■■□□□ 1.04
IFT20-216ENST00000588477 ATP10DQ9P241 1426 aa21.55■■□□□ 1.04
IFT20-216ENST00000588477 RRS1Q15050 365 aaKnown RBP21.55■■□□□ 1.04
IFT20-216ENST00000588477 RAPGEF4Q8WZA2 1011 aa21.54■■□□□ 1.04
IFT20-216ENST00000588477 UBR3Q6ZT12 1888 aa21.54■■□□□ 1.04
IFT20-216ENST00000588477 CGNL1Q0VF96 1302 aa21.54■■□□□ 1.04
IFT20-216ENST00000588477 RTL1A6NKG5 1358 aa21.53■■□□□ 1.04
IFT20-216ENST00000588477 C4BP0C0L5 1744 aa21.53■■□□□ 1.04
IFT20-216ENST00000588477 CD2APQ9Y5K6 639 aa21.53■■□□□ 1.04
IFT20-216ENST00000588477 TATP17735 454 aaPredicted RBP21.52■■□□□ 1.04
IFT20-216ENST00000588477 TESK2Q96S53 571 aa21.52■■□□□ 1.04
IFT20-216ENST00000588477 KIF20BQ96Q89 1820 aa21.52■■□□□ 1.04
IFT20-216ENST00000588477 TOGARAM1Q9Y4F4 1720 aa21.52■■□□□ 1.03
IFT20-216ENST00000588477 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
IFT20-216ENST00000588477 FLAD1Q8NFF5 587 aa21.51■■□□□ 1.03
IFT20-216ENST00000588477 GPBP1L1Q9HC44 474 aaPredicted RBP21.51■■□□□ 1.03
IFT20-216ENST00000588477 SMG6Q86US8 1419 aaKnown RBP21.5■■□□□ 1.03
IFT20-216ENST00000588477 MPRIPQ6WCQ1 1025 aa21.5■■□□□ 1.03
IFT20-216ENST00000588477 PALLDQ8WX93 1383 aa21.49■■□□□ 1.03
IFT20-216ENST00000588477 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
IFT20-216ENST00000588477 GGNBP2Q9H3C7 697 aa21.49■■□□□ 1.03
IFT20-216ENST00000588477 PCDH11XQ9BZA7 1347 aa21.49■■□□□ 1.03
IFT20-216ENST00000588477 PCDH11YQ9BZA8 1340 aa21.49■■□□□ 1.03
IFT20-216ENST00000588477 FYB1O15117 783 aa21.48■■□□□ 1.03
IFT20-216ENST00000588477 HMGB2P26583 209 aaKnown RBP21.48■■□□□ 1.03
IFT20-216ENST00000588477 ZNF526Q8TF50 670 aaPredicted RBP21.48■■□□□ 1.03
IFT20-216ENST00000588477 HSP90AB2PQ58FF8 381 aa21.46■■□□□ 1.03
IFT20-216ENST00000588477 PKD1L3Q7Z443 1732 aa21.46■■□□□ 1.03
IFT20-216ENST00000588477 MAP2P11137 1827 aaKnown RBP21.45■■□□□ 1.03
IFT20-216ENST00000588477 AK7Q96M32 723 aa21.45■■□□□ 1.02
IFT20-216ENST00000588477 WWC3Q9ULE0 1092 aa21.45■■□□□ 1.02
IFT20-216ENST00000588477 ADCY9O60503 1353 aa21.45■■□□□ 1.02
IFT20-216ENST00000588477 CYP27B1O15528 508 aa21.44■■□□□ 1.02
IFT20-216ENST00000588477 SLC24A1O60721 1099 aa21.44■■□□□ 1.02
IFT20-216ENST00000588477 SMIM5Q71RC9 77 aa21.44■■□□□ 1.02
IFT20-216ENST00000588477 AMIGO3Q86WK7 504 aa21.44■■□□□ 1.02
IFT20-216ENST00000588477 INSRP06213 1382 aa21.44■■□□□ 1.02
IFT20-216ENST00000588477 PHF14O94880 888 aa21.43■■□□□ 1.02
IFT20-216ENST00000588477 HSPA6P17066 643 aa21.43■■□□□ 1.02
IFT20-216ENST00000588477 SMARCC1Q92922 1105 aaPredicted RBP21.43■■□□□ 1.02
IFT20-216ENST00000588477 IGSF1Q8N6C5 1336 aa21.43■■□□□ 1.02
IFT20-216ENST00000588477 FLT4P35916 1363 aa21.41■■□□□ 1.02
IFT20-216ENST00000588477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.4■■□□□ 1.02
IFT20-216ENST00000588477 N4BP2Q86UW6 1770 aaPredicted RBP21.39■■□□□ 1.01
IFT20-216ENST00000588477 PIGBQ92521 554 aa21.39■■□□□ 1.01
IFT20-216ENST00000588477 NSD3Q9BZ95 1437 aa21.38■■□□□ 1.01
IFT20-216ENST00000588477 KIF24Q5T7B8 1368 aa21.37■■□□□ 1.01
IFT20-216ENST00000588477 KIF13BQ9NQT8 1826 aa21.37■■□□□ 1.01
IFT20-216ENST00000588477 TMF1P82094 1093 aa21.37■■□□□ 1.01
IFT20-216ENST00000588477 SSFA2P28290 1259 aa21.36■■□□□ 1.01
IFT20-216ENST00000588477 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
IFT20-216ENST00000588477 LOC102724428A0A0B4J2F2 783 aa21.35■■□□□ 1.01
IFT20-216ENST00000588477 SIK1P57059 783 aa21.35■■□□□ 1.01
IFT20-216ENST00000588477 EMILIN1Q9Y6C2 1016 aa21.35■■□□□ 1.01
IFT20-216ENST00000588477 KIAA1551Q9HCM1 1747 aa21.35■■□□□ 1.01
IFT20-216ENST00000588477 NKX1-1Q15270 411 aaPredicted RBP21.34■■□□□ 1.01
IFT20-216ENST00000588477 ANKRD26Q9UPS8 1709 aa21.34■■□□□ 1.01
IFT20-216ENST00000588477 KIF3CO14782 793 aa21.33■■□□□ 1.01
IFT20-216ENST00000588477 SPG7Q9UQ90 795 aa21.33■■□□□ 1.01
IFT20-216ENST00000588477 PPM1GO15355 546 aaPredicted RBP21.32■■□□□ 1
IFT20-216ENST00000588477 CICQ96RK0 1608 aaPredicted RBP21.32■■□□□ 1
IFT20-216ENST00000588477 GNPATO15228 680 aa21.31■■□□□ 1
IFT20-216ENST00000588477 ATP6V1AP38606 617 aa21.31■■□□□ 1
IFT20-216ENST00000588477 ITPK1Q13572 414 aa21.31■■□□□ 1
IFT20-216ENST00000588477 TMOD3Q9NYL9 352 aa21.31■■□□□ 1
IFT20-216ENST00000588477 ASAP1Q9ULH1 1129 aa21.31■■□□□ 1
IFT20-216ENST00000588477 NCAPD2Q15021 1401 aa21.3■■□□□ 1
IFT20-216ENST00000588477 BRCA1P38398 1863 aaKnown RBP21.29■■□□□ 1
IFT20-216ENST00000588477 MMP10P09238 476 aa21.28■■□□□ 1
IFT20-216ENST00000588477 CARD14Q9BXL6 1004 aa21.28■■□□□ 1
IFT20-216ENST00000588477 PXDNLA1KZ92 1463 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms