RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RTL1A6NKG5 1358 aa19.7■□□□□ 0.74
DNMT1-213ENST00000587604 TMF1P82094 1093 aa19.7■□□□□ 0.74
DNMT1-213ENST00000587604 RRS1Q15050 365 aaKnown RBP19.7■□□□□ 0.74
DNMT1-213ENST00000587604 ZNF784Q8NCA9 323 aaPredicted RBP19.7■□□□□ 0.74
DNMT1-213ENST00000587604 TFCP2L1Q9NZI6 479 aa19.7■□□□□ 0.74
DNMT1-213ENST00000587604 SHANK3Q9BYB0 1731 aa19.7■□□□□ 0.74
DNMT1-213ENST00000587604 LY75O60449 1722 aa19.69■□□□□ 0.74
DNMT1-213ENST00000587604 DOT1LQ8TEK3 1739 aa19.69■□□□□ 0.74
DNMT1-213ENST00000587604 NBPF6Q5VWK0 638 aa19.69■□□□□ 0.74
DNMT1-213ENST00000587604 NBPF4Q96M43 638 aa19.69■□□□□ 0.74
DNMT1-213ENST00000587604 GGNBP2Q9H3C7 697 aa19.69■□□□□ 0.74
DNMT1-213ENST00000587604 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
DNMT1-213ENST00000587604 PNPLA7Q6ZV29 1317 aa19.69■□□□□ 0.74
DNMT1-213ENST00000587604 MEGF6O75095 1541 aa19.68■□□□□ 0.74
DNMT1-213ENST00000587604 POLD1P28340 1107 aa19.68■□□□□ 0.74
DNMT1-213ENST00000587604 KCNQ4P56696 695 aa19.68■□□□□ 0.74
DNMT1-213ENST00000587604 NSD2O96028 1365 aa19.68■□□□□ 0.74
DNMT1-213ENST00000587604 COL24A1Q17RW2 1714 aa19.68■□□□□ 0.74
DNMT1-213ENST00000587604 RAPGEF4Q8WZA2 1011 aa19.66■□□□□ 0.74
DNMT1-213ENST00000587604 USP47Q96K76 1375 aa19.66■□□□□ 0.74
DNMT1-213ENST00000587604 TUBGCP6Q96RT7 1819 aa19.65■□□□□ 0.74
DNMT1-213ENST00000587604 CDCA8Q53HL2 280 aa19.65■□□□□ 0.74
DNMT1-213ENST00000587604 CCNL1Q9UK58 526 aaPredicted RBP19.65■□□□□ 0.74
DNMT1-213ENST00000587604 SMG6Q86US8 1419 aaKnown RBP19.65■□□□□ 0.74
DNMT1-213ENST00000587604 GPR162Q16538 588 aa19.64■□□□□ 0.73
DNMT1-213ENST00000587604 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
DNMT1-213ENST00000587604 INSRP06213 1382 aa19.63■□□□□ 0.73
DNMT1-213ENST00000587604 TATP17735 454 aaPredicted RBP19.63■□□□□ 0.73
DNMT1-213ENST00000587604 HSP90AB2PQ58FF8 381 aa19.63■□□□□ 0.73
DNMT1-213ENST00000587604 GOLGB1Q14789 3259 aaKnown RBP19.63■□□□□ 0.73
DNMT1-213ENST00000587604 KIF24Q5T7B8 1368 aa19.62■□□□□ 0.73
DNMT1-213ENST00000587604 KLHL34Q8N239 644 aa19.62■□□□□ 0.73
DNMT1-213ENST00000587604 KIF20BQ96Q89 1820 aa19.61■□□□□ 0.73
DNMT1-213ENST00000587604 HMGB2P26583 209 aaKnown RBP19.61■□□□□ 0.73
DNMT1-213ENST00000587604 FLT4P35916 1363 aa19.6■□□□□ 0.73
DNMT1-213ENST00000587604 PCDH11XQ9BZA7 1347 aa19.59■□□□□ 0.73
DNMT1-213ENST00000587604 PCDH11YQ9BZA8 1340 aa19.59■□□□□ 0.73
DNMT1-213ENST00000587604 COL23A1Q86Y22 540 aaPredicted RBP19.59■□□□□ 0.73
DNMT1-213ENST00000587604 MSH5O43196 834 aa19.58■□□□□ 0.72
DNMT1-213ENST00000587604 CARD14Q9BXL6 1004 aa19.58■□□□□ 0.72
DNMT1-213ENST00000587604 TRIM26Q12899 539 aaPredicted RBP19.56■□□□□ 0.72
DNMT1-213ENST00000587604 NLGN2Q8NFZ4 835 aa19.56■□□□□ 0.72
DNMT1-213ENST00000587604 CYP27B1O15528 508 aa19.55■□□□□ 0.72
DNMT1-213ENST00000587604 MPRIPQ6WCQ1 1025 aa19.55■□□□□ 0.72
DNMT1-213ENST00000587604 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
DNMT1-213ENST00000587604 FLAD1Q8NFF5 587 aa19.54■□□□□ 0.72
DNMT1-213ENST00000587604 EMILIN1Q9Y6C2 1016 aa19.54■□□□□ 0.72
DNMT1-213ENST00000587604 C5P01031 1676 aa19.54■□□□□ 0.72
DNMT1-213ENST00000587604 PALLDQ8WX93 1383 aa19.54■□□□□ 0.72
DNMT1-213ENST00000587604 TAF1LQ8IZX4 1826 aa19.53■□□□□ 0.72
DNMT1-213ENST00000587604 ITGB4P16144 1822 aa19.53■□□□□ 0.72
DNMT1-213ENST00000587604 NSD3Q9BZ95 1437 aa19.52■□□□□ 0.72
DNMT1-213ENST00000587604 C1QTNF8P60827 252 aa19.52■□□□□ 0.72
DNMT1-213ENST00000587604 SMARCC1Q92922 1105 aaPredicted RBP19.52■□□□□ 0.72
DNMT1-213ENST00000587604 MAP2P11137 1827 aaKnown RBP19.51■□□□□ 0.71
DNMT1-213ENST00000587604 PPM1GO15355 546 aaPredicted RBP19.51■□□□□ 0.71
DNMT1-213ENST00000587604 GRIN3BO60391 1043 aa19.51■□□□□ 0.71
DNMT1-213ENST00000587604 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
DNMT1-213ENST00000587604 MSL1Q68DK7 614 aa19.51■□□□□ 0.71
DNMT1-213ENST00000587604 TIMELESSQ9UNS1 1208 aa19.51■□□□□ 0.71
DNMT1-213ENST00000587604 WASHC2AQ641Q2 1341 aa19.51■□□□□ 0.71
DNMT1-213ENST00000587604 SPG7Q9UQ90 795 aa19.5■□□□□ 0.71
DNMT1-213ENST00000587604 PKD1L3Q7Z443 1732 aa19.5■□□□□ 0.71
DNMT1-213ENST00000587604 NCAPD2Q15021 1401 aa19.5■□□□□ 0.71
DNMT1-213ENST00000587604 TOGARAM1Q9Y4F4 1720 aa19.49■□□□□ 0.71
DNMT1-213ENST00000587604 YBX3P16989 372 aaKnown RBP eCLIP19.49■□□□□ 0.71
DNMT1-213ENST00000587604 PIGBQ92521 554 aa19.49■□□□□ 0.71
DNMT1-213ENST00000587604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.48■□□□□ 0.714e-8■□□□□ 8.5
DNMT1-213ENST00000587604 CD2APQ9Y5K6 639 aa19.48■□□□□ 0.71
DNMT1-213ENST00000587604 ANKRD26Q9UPS8 1709 aa19.48■□□□□ 0.71
DNMT1-213ENST00000587604 AK7Q96M32 723 aa19.47■□□□□ 0.71
DNMT1-213ENST00000587604 EYA1Q99502 592 aa19.47■□□□□ 0.71
DNMT1-213ENST00000587604 C4BP0C0L5 1744 aa19.47■□□□□ 0.71
DNMT1-213ENST00000587604 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
DNMT1-213ENST00000587604 POLKQ9UBT6 870 aa19.45■□□□□ 0.7
DNMT1-213ENST00000587604 UBR3Q6ZT12 1888 aa19.44■□□□□ 0.7
DNMT1-213ENST00000587604 GIGYF1O75420 1035 aaPredicted RBP19.44■□□□□ 0.7
DNMT1-213ENST00000587604 LOC102724428A0A0B4J2F2 783 aa19.43■□□□□ 0.7
DNMT1-213ENST00000587604 SIK1P57059 783 aa19.43■□□□□ 0.7
DNMT1-213ENST00000587604 AMIGO3Q86WK7 504 aa19.43■□□□□ 0.7
DNMT1-213ENST00000587604 IFNL2Q8IZJ0 200 aa19.43■□□□□ 0.7
DNMT1-213ENST00000587604 TMOD3Q9NYL9 352 aa19.43■□□□□ 0.7
DNMT1-213ENST00000587604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.42■□□□□ 0.7
DNMT1-213ENST00000587604 PHF14O94880 888 aa19.41■□□□□ 0.7
DNMT1-213ENST00000587604 PHKG2P15735 406 aa19.41■□□□□ 0.7
DNMT1-213ENST00000587604 SSFA2P28290 1259 aa19.41■□□□□ 0.7
DNMT1-213ENST00000587604 LINC00116Q8NCU8 138 aa19.4■□□□□ 0.7
DNMT1-213ENST00000587604 ASAP1Q9ULH1 1129 aa19.4■□□□□ 0.7
DNMT1-213ENST00000587604 EIF4A2Q14240 407 aaKnown RBP19.39■□□□□ 0.69
DNMT1-213ENST00000587604 SMIM5Q71RC9 77 aa19.39■□□□□ 0.69
DNMT1-213ENST00000587604 CLSPNQ9HAW4 1339 aa19.39■□□□□ 0.69
DNMT1-213ENST00000587604 ATP6V1AP38606 617 aa19.38■□□□□ 0.69
DNMT1-213ENST00000587604 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
DNMT1-213ENST00000587604 POLR3GLQ9BT43 218 aa19.38■□□□□ 0.69
DNMT1-213ENST00000587604 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
DNMT1-213ENST00000587604 ITPK1Q13572 414 aa19.37■□□□□ 0.69
DNMT1-213ENST00000587604 ATG3Q9NT62 314 aa19.37■□□□□ 0.69
DNMT1-213ENST00000587604 GNPATO15228 680 aa19.36■□□□□ 0.69
DNMT1-213ENST00000587604 IGSF1Q8N6C5 1336 aa19.34■□□□□ 0.69
DNMT1-213ENST00000587604 ERVV-2B6SEH9 535 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms