RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 PAPPAQ13219 1627 aa15.03■□□□□ -0
CSNK1D-226ENST00000585026 PNPLA7Q6ZV29 1317 aa15.02■□□□□ -0
CSNK1D-226ENST00000585026 BTAF1O14981 1849 aa15.02■□□□□ -0
CSNK1D-226ENST00000585026 PELP1Q8IZL8 1130 aaKnown RBP15.02■□□□□ -0
CSNK1D-226ENST00000585026 RAPGEF4Q8WZA2 1011 aa15.02■□□□□ -0
CSNK1D-226ENST00000585026 CCNL1Q9UK58 526 aaPredicted RBP15.02■□□□□ -0
CSNK1D-226ENST00000585026 LTN1O94822 1766 aa15.02□□□□□ -0.01
CSNK1D-226ENST00000585026 RTL1A6NKG5 1358 aa15.01□□□□□ -0.01
CSNK1D-226ENST00000585026 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
CSNK1D-226ENST00000585026 MSH5O43196 834 aa15.01□□□□□ -0.01
CSNK1D-226ENST00000585026 C1QTNF8P60827 252 aa15.01□□□□□ -0.01
CSNK1D-226ENST00000585026 SMG6Q86US8 1419 aaKnown RBP15□□□□□ -0.01
CSNK1D-226ENST00000585026 USP47Q96K76 1375 aa15□□□□□ -0.01
CSNK1D-226ENST00000585026 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
CSNK1D-226ENST00000585026 GRIN3BO60391 1043 aa15□□□□□ -0.01
CSNK1D-226ENST00000585026 TESK2Q96S53 571 aa15□□□□□ -0.01
CSNK1D-226ENST00000585026 FAM208AQ9UK61 1670 aaKnown RBP15□□□□□ -0.01
CSNK1D-226ENST00000585026 TATP17735 454 aaPredicted RBP14.99□□□□□ -0.01
CSNK1D-226ENST00000585026 TMF1P82094 1093 aa14.99□□□□□ -0.01
CSNK1D-226ENST00000585026 KCNQ4P56696 695 aa14.98□□□□□ -0.01
CSNK1D-226ENST00000585026 CDCA8Q53HL2 280 aa14.98□□□□□ -0.01
CSNK1D-226ENST00000585026 FLAD1Q8NFF5 587 aa14.98□□□□□ -0.01
CSNK1D-226ENST00000585026 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
CSNK1D-226ENST00000585026 FBLN1P23142 703 aa14.96□□□□□ -0.01
CSNK1D-226ENST00000585026 RRS1Q15050 365 aaKnown RBP14.96□□□□□ -0.01
CSNK1D-226ENST00000585026 NBPF6Q5VWK0 638 aa14.96□□□□□ -0.01
CSNK1D-226ENST00000585026 NBPF4Q96M43 638 aa14.96□□□□□ -0.01
CSNK1D-226ENST00000585026 CHD4Q14839 1912 aa14.96□□□□□ -0.02
CSNK1D-226ENST00000585026 PCDH11XQ9BZA7 1347 aa14.95□□□□□ -0.02
CSNK1D-226ENST00000585026 PCDH11YQ9BZA8 1340 aa14.95□□□□□ -0.02
CSNK1D-226ENST00000585026 FYB1O15117 783 aa14.95□□□□□ -0.02
CSNK1D-226ENST00000585026 COL23A1Q86Y22 540 aaPredicted RBP14.95□□□□□ -0.02
CSNK1D-226ENST00000585026 GGNBP2Q9H3C7 697 aa14.95□□□□□ -0.02
CSNK1D-226ENST00000585026 NSD2O96028 1365 aa14.95□□□□□ -0.02
CSNK1D-226ENST00000585026 MEGF6O75095 1541 aa14.94□□□□□ -0.02
CSNK1D-226ENST00000585026 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
CSNK1D-226ENST00000585026 SMARCC1Q92922 1105 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-226ENST00000585026 KIF24Q5T7B8 1368 aa14.94□□□□□ -0.02
CSNK1D-226ENST00000585026 QSER1Q2KHR3 1735 aa14.93□□□□□ -0.02
CSNK1D-226ENST00000585026 USHBP1Q8N6Y0 703 aa14.93□□□□□ -0.02
CSNK1D-226ENST00000585026 CD2APQ9Y5K6 639 aa14.92□□□□□ -0.02
CSNK1D-226ENST00000585026 INSRP06213 1382 aa14.92□□□□□ -0.02
CSNK1D-226ENST00000585026 FLT4P35916 1363 aa14.92□□□□□ -0.02
CSNK1D-226ENST00000585026 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
CSNK1D-226ENST00000585026 MPRIPQ6WCQ1 1025 aa14.91□□□□□ -0.02
CSNK1D-226ENST00000585026 PALLDQ8WX93 1383 aa14.9□□□□□ -0.02
CSNK1D-226ENST00000585026 DOT1LQ8TEK3 1739 aa14.9□□□□□ -0.02
CSNK1D-226ENST00000585026 MSL1Q68DK7 614 aa14.9□□□□□ -0.02
CSNK1D-226ENST00000585026 AK7Q96M32 723 aa14.9□□□□□ -0.02
CSNK1D-226ENST00000585026 UTRNP46939 3433 aa14.9□□□□□ -0.02
CSNK1D-226ENST00000585026 SPG7Q9UQ90 795 aa14.89□□□□□ -0.03
CSNK1D-226ENST00000585026 NSD3Q9BZ95 1437 aa14.89□□□□□ -0.03
CSNK1D-226ENST00000585026 YBX3P16989 372 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■■■□□ 17
CSNK1D-226ENST00000585026 LY75O60449 1722 aa14.88□□□□□ -0.03
CSNK1D-226ENST00000585026 COL24A1Q17RW2 1714 aa14.87□□□□□ -0.03
CSNK1D-226ENST00000585026 PPM1GO15355 546 aaPredicted RBP14.86□□□□□ -0.03
CSNK1D-226ENST00000585026 CYP27B1O15528 508 aa14.86□□□□□ -0.03
CSNK1D-226ENST00000585026 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
CSNK1D-226ENST00000585026 GPBP1L1Q9HC44 474 aaPredicted RBP14.85□□□□□ -0.03
CSNK1D-226ENST00000585026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.85□□□□□ -0.03
CSNK1D-226ENST00000585026 SSFA2P28290 1259 aa14.84□□□□□ -0.03
CSNK1D-226ENST00000585026 NKX1-1Q15270 411 aaPredicted RBP14.84□□□□□ -0.03
CSNK1D-226ENST00000585026 PIGBQ92521 554 aa14.84□□□□□ -0.03
CSNK1D-226ENST00000585026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.83□□□□□ -0.04
CSNK1D-226ENST00000585026 PHF14O94880 888 aa14.83□□□□□ -0.04
CSNK1D-226ENST00000585026 TMOD3Q9NYL9 352 aa14.83□□□□□ -0.04
CSNK1D-226ENST00000585026 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
CSNK1D-226ENST00000585026 SHANK3Q9BYB0 1731 aa14.83□□□□□ -0.04
CSNK1D-226ENST00000585026 LOC102724428A0A0B4J2F2 783 aa14.82□□□□□ -0.04
CSNK1D-226ENST00000585026 SIK1P57059 783 aa14.82□□□□□ -0.04
CSNK1D-226ENST00000585026 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
CSNK1D-226ENST00000585026 RGPD2P0DJD1 1756 aa14.82□□□□□ -0.04
CSNK1D-226ENST00000585026 TUBGCP6Q96RT7 1819 aa14.82□□□□□ -0.04
CSNK1D-226ENST00000585026 ATP10DQ9P241 1426 aa14.82□□□□□ -0.04
CSNK1D-226ENST00000585026 IFNL2Q8IZJ0 200 aa14.81□□□□□ -0.04
CSNK1D-226ENST00000585026 CARD14Q9BXL6 1004 aa14.81□□□□□ -0.04
CSNK1D-226ENST00000585026 IGSF1Q8N6C5 1336 aa14.8□□□□□ -0.04
CSNK1D-226ENST00000585026 C5P01031 1676 aa14.8□□□□□ -0.04
CSNK1D-226ENST00000585026 GNPATO15228 680 aa14.79□□□□□ -0.04
CSNK1D-226ENST00000585026 ATP6V1AP38606 617 aa14.79□□□□□ -0.04
CSNK1D-226ENST00000585026 EYA1Q99502 592 aa14.79□□□□□ -0.04
CSNK1D-226ENST00000585026 NCAPD2Q15021 1401 aa14.77□□□□□ -0.04
CSNK1D-226ENST00000585026 PLEKHG2Q9H7P9 1386 aa14.77□□□□□ -0.04
CSNK1D-226ENST00000585026 HSP90AB1P08238 724 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-226ENST00000585026 PHKG2P15735 406 aa14.77□□□□□ -0.05
CSNK1D-226ENST00000585026 LINC00116Q8NCU8 138 aa14.77□□□□□ -0.05
CSNK1D-226ENST00000585026 C4BP0C0L5 1744 aa14.77□□□□□ -0.05
CSNK1D-226ENST00000585026 NLGN1Q8N2Q7 840 aa14.76□□□□□ -0.05
CSNK1D-226ENST00000585026 ZNF526Q8TF50 670 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-226ENST00000585026 POLKQ9UBT6 870 aa14.76□□□□□ -0.05
CSNK1D-226ENST00000585026 ASAP1Q9ULH1 1129 aa14.76□□□□□ -0.05
CSNK1D-226ENST00000585026 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-226ENST00000585026 KIF20BQ96Q89 1820 aa14.76□□□□□ -0.05
CSNK1D-226ENST00000585026 HSPA6P17066 643 aa14.75□□□□□ -0.05
CSNK1D-226ENST00000585026 TGFB2P61812 414 aa14.75□□□□□ -0.05
CSNK1D-226ENST00000585026 TRAPPC3LQ5T215 181 aa14.75□□□□□ -0.05
CSNK1D-226ENST00000585026 AMIGO3Q86WK7 504 aa14.75□□□□□ -0.05
CSNK1D-226ENST00000585026 ADCY9O60503 1353 aa14.74□□□□□ -0.05
CSNK1D-226ENST00000585026 ERVV-2B6SEH9 535 aa14.74□□□□□ -0.05
CSNK1D-226ENST00000585026 MMP10P09238 476 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms