RNA–Protein interactions for RNA: ENST00000583837.5

BRIP1-205, Transcript of BRCA1 interacting protein C-terminal helicase 1, human

TSL 5

Gene BRIP1, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRIP1-205	ENST00000583837	PTF1A	Q7RTS3	328 aa		13.72	□□□□□ -0.21
BRIP1-205	ENST00000583837	ABCC6	O95255	1503 aa		13.72	□□□□□ -0.21
BRIP1-205	ENST00000583837	INSR	P06213	1382 aa		13.71	□□□□□ -0.21
BRIP1-205	ENST00000583837	HOXC9	P31274	260 aa		13.71	□□□□□ -0.21
BRIP1-205	ENST00000583837	DDB1	Q16531	1140 aa		13.71	□□□□□ -0.21
BRIP1-205	ENST00000583837	PROM2	Q8N271	834 aa		13.71	□□□□□ -0.21
BRIP1-205	ENST00000583837	MARCH10	Q8NA82	808 aa	Predicted RBP	13.71	□□□□□ -0.21
BRIP1-205	ENST00000583837	IP6K1	Q92551	441 aa		13.71	□□□□□ -0.21
BRIP1-205	ENST00000583837	ADAMTS8	Q9UP79	889 aa		13.71	□□□□□ -0.21
BRIP1-205	ENST00000583837	TOM1L2	Q6ZVM7	507 aa		13.7	□□□□□ -0.22
BRIP1-205	ENST00000583837	LTV1	Q96GA3	475 aa	Predicted RBP	13.7	□□□□□ -0.22
BRIP1-205	ENST00000583837	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.7	□□□□□ -0.22
BRIP1-205	ENST00000583837	SMG6	Q86US8	1419 aa	Known RBP	13.7	□□□□□ -0.22
BRIP1-205	ENST00000583837	LTN1	O94822	1766 aa		13.7	□□□□□ -0.22
BRIP1-205	ENST00000583837	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.69	□□□□□ -0.22
BRIP1-205	ENST00000583837	IL13	P35225	146 aa		13.69	□□□□□ -0.22
BRIP1-205	ENST00000583837	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
BRIP1-205	ENST00000583837	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.69	□□□□□ -0.22
BRIP1-205	ENST00000583837	CARD10	Q9BWT7	1032 aa		13.69	□□□□□ -0.22
BRIP1-205	ENST00000583837	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.69	□□□□□ -0.22
BRIP1-205	ENST00000583837	FLT4	P35916	1363 aa		13.69	□□□□□ -0.22
BRIP1-205	ENST00000583837	COL3A1	P02461	1466 aa	Predicted RBP	13.68	□□□□□ -0.22
BRIP1-205	ENST00000583837	KCNQ2	O43526	872 aa		13.68	□□□□□ -0.22
BRIP1-205	ENST00000583837	EIF4A2	Q14240	407 aa	Known RBP	13.68	□□□□□ -0.22
BRIP1-205	ENST00000583837	KIF24	Q5T7B8	1368 aa		13.68	□□□□□ -0.22
BRIP1-205	ENST00000583837	SPON1	Q9HCB6	807 aa		13.67	□□□□□ -0.22
BRIP1-205	ENST00000583837	RTL1	A6NKG5	1358 aa		13.66	□□□□□ -0.22
BRIP1-205	ENST00000583837	SENP3-EIF4A1	A0A087X0R7	540 aa		13.65	□□□□□ -0.22
BRIP1-205	ENST00000583837	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
BRIP1-205	ENST00000583837	CCDC146	Q8IYE0	955 aa		13.65	□□□□□ -0.22
BRIP1-205	ENST00000583837	NHS	Q6T4R5	1651 aa		13.65	□□□□□ -0.22
BRIP1-205	ENST00000583837	TNS2	Q63HR2	1409 aa		13.64	□□□□□ -0.23
BRIP1-205	ENST00000583837	HMOX1	P09601	288 aa		13.64	□□□□□ -0.23
BRIP1-205	ENST00000583837	ANKRD24	Q8TF21	1146 aa		13.64	□□□□□ -0.23
BRIP1-205	ENST00000583837	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.64	□□□□□ -0.23
BRIP1-205	ENST00000583837	ADRA2B	P18089	450 aa		13.63	□□□□□ -0.23
BRIP1-205	ENST00000583837	EYA1	Q99502	592 aa		13.63	□□□□□ -0.23
BRIP1-205	ENST00000583837	PNN	Q9H307	717 aa	Known RBP	13.63	□□□□□ -0.23
BRIP1-205	ENST00000583837	PAPPA	Q13219	1627 aa		13.63	□□□□□ -0.23
BRIP1-205	ENST00000583837	UTRN	P46939	3433 aa		13.63	□□□□□ -0.23
BRIP1-205	ENST00000583837	ERBB3	P21860	1342 aa		13.63	□□□□□ -0.23
BRIP1-205	ENST00000583837	EXOC5	O00471	708 aa		13.62	□□□□□ -0.23
BRIP1-205	ENST00000583837	FCHSD2	O94868	740 aa		13.62	□□□□□ -0.23
BRIP1-205	ENST00000583837	CSB-PGBD3	P0DP91	1061 aa		13.62	□□□□□ -0.23
BRIP1-205	ENST00000583837	PTGER2	P43116	358 aa		13.62	□□□□□ -0.23
BRIP1-205	ENST00000583837	SULT6B1	Q6IMI4	303 aa		13.62	□□□□□ -0.23
BRIP1-205	ENST00000583837	RUNDC1	Q96C34	613 aa		13.62	□□□□□ -0.23
BRIP1-205	ENST00000583837	TXNRD1	Q16881	649 aa		13.61	□□□□□ -0.23
BRIP1-205	ENST00000583837	SALL2	Q9Y467	1007 aa	Predicted RBP	13.61	□□□□□ -0.23
BRIP1-205	ENST00000583837	NEFM	P07197	916 aa		13.6	□□□□□ -0.23
BRIP1-205	ENST00000583837	PRKAR2B	P31323	418 aa		13.6	□□□□□ -0.23
BRIP1-205	ENST00000583837	NBPF6	Q5VWK0	638 aa		13.6	□□□□□ -0.23
BRIP1-205	ENST00000583837	AEBP1	Q8IUX7	1158 aa		13.6	□□□□□ -0.23
BRIP1-205	ENST00000583837	USHBP1	Q8N6Y0	703 aa		13.6	□□□□□ -0.23
BRIP1-205	ENST00000583837	NBPF4	Q96M43	638 aa		13.6	□□□□□ -0.23
BRIP1-205	ENST00000583837	RSPH6A	Q9H0K4	717 aa		13.6	□□□□□ -0.23
BRIP1-205	ENST00000583837	BTAF1	O14981	1849 aa		13.6	□□□□□ -0.23
BRIP1-205	ENST00000583837	RGPD2	P0DJD1	1756 aa		13.59	□□□□□ -0.23
BRIP1-205	ENST00000583837	APAF1	O14727	1248 aa		13.59	□□□□□ -0.23
BRIP1-205	ENST00000583837	SLC15A2	Q16348	729 aa		13.59	□□□□□ -0.23
BRIP1-205	ENST00000583837	SGIP1	Q9BQI5	828 aa		13.59	□□□□□ -0.23
BRIP1-205	ENST00000583837	NLRP2	Q9NX02	1062 aa		13.59	□□□□□ -0.23
BRIP1-205	ENST00000583837	YY1	P25490	414 aa		13.58	□□□□□ -0.24
BRIP1-205	ENST00000583837	PLEKHF1	Q96S99	279 aa		13.58	□□□□□ -0.24
BRIP1-205	ENST00000583837	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.58	□□□□□ -0.24
BRIP1-205	ENST00000583837	IGSF1	Q8N6C5	1336 aa		13.58	□□□□□ -0.24
BRIP1-205	ENST00000583837	MAPK8IP3	Q9UPT6	1336 aa		13.58	□□□□□ -0.24
BRIP1-205	ENST00000583837	NEUROD2	Q15784	382 aa		13.57	□□□□□ -0.24
BRIP1-205	ENST00000583837	FAM208A	Q9UK61	1670 aa	Known RBP	13.56	□□□□□ -0.24
BRIP1-205	ENST00000583837	COL24A1	Q17RW2	1714 aa		13.56	□□□□□ -0.24
BRIP1-205	ENST00000583837	ZBTB7A	O95365	584 aa		13.56	□□□□□ -0.24
BRIP1-205	ENST00000583837	IL2RB	P14784	551 aa		13.56	□□□□□ -0.24
BRIP1-205	ENST00000583837	PHACTR3	Q96KR7	559 aa		13.56	□□□□□ -0.24
BRIP1-205	ENST00000583837	RRP7A	Q9Y3A4	280 aa	Known RBP	13.56	□□□□□ -0.24
BRIP1-205	ENST00000583837	QSER1	Q2KHR3	1735 aa		13.56	□□□□□ -0.24
BRIP1-205	ENST00000583837	KAT6B	Q8WYB5	2073 aa		13.55	□□□□□ -0.24
BRIP1-205	ENST00000583837	STK32B	Q9NY57	414 aa		13.55	□□□□□ -0.24
BRIP1-205	ENST00000583837	SHANK3	Q9BYB0	1731 aa		13.54	□□□□□ -0.24
BRIP1-205	ENST00000583837	TMPO	P42166	694 aa	Known RBP	13.54	□□□□□ -0.24
BRIP1-205	ENST00000583837	ACSBG1	Q96GR2	724 aa		13.53	□□□□□ -0.24
BRIP1-205	ENST00000583837	SYT17	Q9BSW7	474 aa		13.53	□□□□□ -0.24
BRIP1-205	ENST00000583837	MTFR1L	Q9H019	292 aa		13.53	□□□□□ -0.24
BRIP1-205	ENST00000583837	LRRC4B	Q9NT99	713 aa		13.53	□□□□□ -0.24
BRIP1-205	ENST00000583837	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.53	□□□□□ -0.24
BRIP1-205	ENST00000583837	RIPK4	P57078	832 aa		13.52	□□□□□ -0.25
BRIP1-205	ENST00000583837	NFE2L2	Q16236	605 aa		13.52	□□□□□ -0.25
BRIP1-205	ENST00000583837	ZBED9	Q6R2W3	1325 aa		13.52	□□□□□ -0.25
BRIP1-205	ENST00000583837	KDR	P35968	1356 aa		13.52	□□□□□ -0.25
BRIP1-205	ENST00000583837	LY75	O60449	1722 aa		13.52	□□□□□ -0.25
BRIP1-205	ENST00000583837	CHD4	Q14839	1912 aa		13.51	□□□□□ -0.25
BRIP1-205	ENST00000583837	MAP3K5	Q99683	1374 aa		13.51	□□□□□ -0.25
BRIP1-205	ENST00000583837	TAT	P17735	454 aa	Predicted RBP	13.51	□□□□□ -0.25
BRIP1-205	ENST00000583837	ZNF827	Q17R98	1081 aa		13.51	□□□□□ -0.25
BRIP1-205	ENST00000583837	NGEF	Q8N5V2	710 aa		13.51	□□□□□ -0.25
BRIP1-205	ENST00000583837	RAPGEF4	Q8WZA2	1011 aa		13.51	□□□□□ -0.25
BRIP1-205	ENST00000583837	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.51	□□□□□ -0.25
BRIP1-205	ENST00000583837	TUBGCP6	Q96RT7	1819 aa		13.5	□□□□□ -0.25
BRIP1-205	ENST00000583837	MTHFSD	Q2M296	383 aa	Known RBP	13.5	□□□□□ -0.25
BRIP1-205	ENST00000583837	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.5	□□□□□ -0.25
BRIP1-205	ENST00000583837	AKT1S1	Q96B36	256 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms