RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 SYTL4Q96C24 671 aaPredicted RBP9.34□□□□□ -0.91
NUP85-221ENST00000583548 LY75O60449 1722 aa9.34□□□□□ -0.92
NUP85-221ENST00000583548 ERBB3P21860 1342 aa9.33□□□□□ -0.92
NUP85-221ENST00000583548 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
NUP85-221ENST00000583548 KCNQ4P56696 695 aa9.33□□□□□ -0.92
NUP85-221ENST00000583548 USP47Q96K76 1375 aa9.33□□□□□ -0.92
NUP85-221ENST00000583548 QRICH2Q9H0J4 1663 aa9.32□□□□□ -0.92
NUP85-221ENST00000583548 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
NUP85-221ENST00000583548 TTC21AQ8NDW8 1320 aa9.31□□□□□ -0.92
NUP85-221ENST00000583548 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
NUP85-221ENST00000583548 DDX54Q8TDD1 881 aaKnown RBP9.31□□□□□ -0.92
NUP85-221ENST00000583548 DCAF11Q8TEB1 546 aa9.31□□□□□ -0.92
NUP85-221ENST00000583548 ZNF692Q9BU19 519 aaPredicted RBP9.31□□□□□ -0.92
NUP85-221ENST00000583548 PRDM10Q9NQV6 1147 aa9.31□□□□□ -0.92
NUP85-221ENST00000583548 KDM2AQ9Y2K7 1162 aa9.31□□□□□ -0.92
NUP85-221ENST00000583548 SOX12O15370 315 aa9.3□□□□□ -0.92
NUP85-221ENST00000583548 TGFB2P61812 414 aa9.3□□□□□ -0.92
NUP85-221ENST00000583548 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
NUP85-221ENST00000583548 ARHGAP27Q6ZUM4 889 aa9.3□□□□□ -0.92
NUP85-221ENST00000583548 CABP1Q9NZU7 370 aa9.3□□□□□ -0.92
NUP85-221ENST00000583548 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
NUP85-221ENST00000583548 NFAT5O94916 1531 aa9.3□□□□□ -0.92
NUP85-221ENST00000583548 PXDNLA1KZ92 1463 aa9.29□□□□□ -0.92
NUP85-221ENST00000583548 NSD2O96028 1365 aa9.29□□□□□ -0.92
NUP85-221ENST00000583548 TNRC6CQ9HCJ0 1690 aaKnown RBP9.29□□□□□ -0.92
NUP85-221ENST00000583548 TTC21BQ7Z4L5 1316 aa9.29□□□□□ -0.92
NUP85-221ENST00000583548 MLLT1Q03111 559 aaPredicted RBP9.28□□□□□ -0.92
NUP85-221ENST00000583548 C9orf131Q5VYM1 1079 aa9.28□□□□□ -0.92
NUP85-221ENST00000583548 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
NUP85-221ENST00000583548 AK7Q96M32 723 aa9.28□□□□□ -0.92
NUP85-221ENST00000583548 CABP2Q9NPB3 220 aa9.28□□□□□ -0.92
NUP85-221ENST00000583548 C5P01031 1676 aa9.28□□□□□ -0.92
NUP85-221ENST00000583548 KAT6BQ8WYB5 2073 aa9.27□□□□□ -0.93
NUP85-221ENST00000583548 RRAGCQ9HB90 399 aa9.27□□□□□ -0.93
NUP85-221ENST00000583548 DOT1LQ8TEK3 1739 aa9.27□□□□□ -0.93
NUP85-221ENST00000583548 USP54Q70EL1 1684 aa9.26□□□□□ -0.93
NUP85-221ENST00000583548 KCPQ6ZWJ8 1503 aa9.26□□□□□ -0.93
NUP85-221ENST00000583548 FCHSD2O94868 740 aa9.26□□□□□ -0.93
NUP85-221ENST00000583548 SSFA2P28290 1259 aa9.26□□□□□ -0.93
NUP85-221ENST00000583548 CTCFP49711 727 aaPredicted RBP9.26□□□□□ -0.93
NUP85-221ENST00000583548 AIDAQ96BJ3 306 aa9.26□□□□□ -0.93
NUP85-221ENST00000583548 CENPJQ9HC77 1338 aaPredicted RBP9.26□□□□□ -0.93
NUP85-221ENST00000583548 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
NUP85-221ENST00000583548 FAM208AQ9UK61 1670 aaKnown RBP9.24□□□□□ -0.93
NUP85-221ENST00000583548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.24□□□□□ -0.93
NUP85-221ENST00000583548 VEGFAP15692 232 aaPredicted RBP9.24□□□□□ -0.93
NUP85-221ENST00000583548 PIAS4Q8N2W9 510 aaPredicted RBP9.24□□□□□ -0.93
NUP85-221ENST00000583548 ZCRB1Q8TBF4 217 aaKnown RBP9.24□□□□□ -0.93
NUP85-221ENST00000583548 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
NUP85-221ENST00000583548 RNF181Q9P0P0 153 aa9.24□□□□□ -0.93
NUP85-221ENST00000583548 PKD1L3Q7Z443 1732 aa9.24□□□□□ -0.93
NUP85-221ENST00000583548 PALLDQ8WX93 1383 aa9.24□□□□□ -0.93
NUP85-221ENST00000583548 C4BP0C0L5 1744 aa9.23□□□□□ -0.93
NUP85-221ENST00000583548 FOXN1O15353 648 aa9.23□□□□□ -0.93
NUP85-221ENST00000583548 PHF14O94880 888 aa9.23□□□□□ -0.93
NUP85-221ENST00000583548 PPARGC1BQ86YN6 1023 aaKnown RBP9.23□□□□□ -0.93
NUP85-221ENST00000583548 ABHD8Q96I13 439 aa9.23□□□□□ -0.93
NUP85-221ENST00000583548 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
NUP85-221ENST00000583548 USP31Q70CQ4 1352 aa9.23□□□□□ -0.93
NUP85-221ENST00000583548 KIAA1210Q9ULL0 1709 aa9.22□□□□□ -0.93
NUP85-221ENST00000583548 KIF13BQ9NQT8 1826 aa9.22□□□□□ -0.93
NUP85-221ENST00000583548 A0A0G2JLW4 131 aa9.22□□□□□ -0.93
NUP85-221ENST00000583548 MMP10P09238 476 aa9.22□□□□□ -0.93
NUP85-221ENST00000583548 RGS19P49795 217 aa9.22□□□□□ -0.93
NUP85-221ENST00000583548 CREBZFQ9NS37 354 aa9.22□□□□□ -0.93
NUP85-221ENST00000583548 CCDC87Q9NVE4 849 aa9.22□□□□□ -0.93
NUP85-221ENST00000583548 CGNL1Q0VF96 1302 aa9.22□□□□□ -0.93
NUP85-221ENST00000583548 KTN1Q86UP2 1357 aaKnown RBP9.22□□□□□ -0.93
NUP85-221ENST00000583548 NLGN1Q8N2Q7 840 aa9.21□□□□□ -0.94
NUP85-221ENST00000583548 PIM2Q9P1W9 311 aa9.21□□□□□ -0.94
NUP85-221ENST00000583548 TAF1LQ8IZX4 1826 aa9.21□□□□□ -0.94
NUP85-221ENST00000583548 KIAA1551Q9HCM1 1747 aa9.2□□□□□ -0.94
NUP85-221ENST00000583548 DPEP1P16444 411 aa9.2□□□□□ -0.94
NUP85-221ENST00000583548 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
NUP85-221ENST00000583548 LTN1O94822 1766 aa9.19□□□□□ -0.94
NUP85-221ENST00000583548 UBR3Q6ZT12 1888 aa9.19□□□□□ -0.94
NUP85-221ENST00000583548 GLTPD2A6NH11 291 aa9.19□□□□□ -0.94
NUP85-221ENST00000583548 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
NUP85-221ENST00000583548 IP6K1Q92551 441 aa9.19□□□□□ -0.94
NUP85-221ENST00000583548 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
NUP85-221ENST00000583548 TOGARAM1Q9Y4F4 1720 aa9.19□□□□□ -0.94
NUP85-221ENST00000583548 N4BP2Q86UW6 1770 aaPredicted RBP9.19□□□□□ -0.94
NUP85-221ENST00000583548 ARFGEF1Q9Y6D6 1849 aa9.19□□□□□ -0.94
NUP85-221ENST00000583548 PCNTO95613 3336 aa9.18□□□□□ -0.94
NUP85-221ENST00000583548 CNTNAP1P78357 1384 aa9.18□□□□□ -0.94
NUP85-221ENST00000583548 PCDH11XQ9BZA7 1347 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 PCDH11YQ9BZA8 1340 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 CCDC85CA6NKD9 419 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 GNPATO15228 680 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 LBX1P52954 281 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 TMF1P82094 1093 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 MPRIPQ6WCQ1 1025 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 AMIGO3Q86WK7 504 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 RAPGEF4Q8WZA2 1011 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 PARP3Q9Y6F1 533 aa9.17□□□□□ -0.94
NUP85-221ENST00000583548 DPY19L2Q6NUT2 758 aa9.16□□□□□ -0.94
NUP85-221ENST00000583548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.16□□□□□ -0.94
NUP85-221ENST00000583548 LTV1Q96GA3 475 aaPredicted RBP9.16□□□□□ -0.94
NUP85-221ENST00000583548 WBP1LQ9NX94 342 aa9.16□□□□□ -0.94
NUP85-221ENST00000583548 BRCA1P38398 1863 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms