RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 IL2RBP14784 551 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 VEGFBP49765 207 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 NLRP2Q9NX02 1062 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 RNF181Q9P0P0 153 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 LRRC37A3O60309 1634 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 LMO7Q8WWI1 1683 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 CCDC7Q96M83 1385 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 PPLO60437 1756 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 KCPQ6ZWJ8 1503 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 GLTPD2A6NH11 291 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 SOX12O15370 315 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 DPEP1P16444 411 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 KCNH5Q8NCM2 988 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 KNDC1Q76NI1 1749 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 ERBB3P21860 1342 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 POLR3AO14802 1390 aaPredicted RBP3.6□□□□□ -1.83
SNORD53-201ENST00000579969 PLEKHG2Q9H7P9 1386 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 PIK3C2GO75747 1445 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 C10orf71Q711Q0 1435 aa3.6□□□□□ -1.83
SNORD53-201ENST00000579969 QSER1Q2KHR3 1735 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 AKAP12Q02952 1782 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 BTAF1O14981 1849 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.59□□□□□ -1.83
SNORD53-201ENST00000579969 POTECB2RU33 542 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 PHF14O94880 888 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 MMP10P09238 476 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 KCNA3P22001 575 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 MAP2K1Q02750 393 aaPredicted RBP3.59□□□□□ -1.83
SNORD53-201ENST00000579969 DALRD3Q5D0E6 543 aaKnown RBP3.59□□□□□ -1.83
SNORD53-201ENST00000579969 PRPF38BQ5VTL8 546 aaKnown RBP3.59□□□□□ -1.83
SNORD53-201ENST00000579969 PIM2Q9P1W9 311 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 CNTNAP1P78357 1384 aa3.59□□□□□ -1.83
SNORD53-201ENST00000579969 PPIP5K1Q6PFW1 1433 aa3.59□□□□□ -1.84
SNORD53-201ENST00000579969 NHSQ6T4R5 1651 aa3.59□□□□□ -1.84
SNORD53-201ENST00000579969 DEFB115Q30KQ5 88 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 CHADLQ6NUI6 762 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 DPY19L2Q6NUT2 758 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 AMIGO3Q86WK7 504 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 DCAF5Q96JK2 942 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 AK7Q96M32 723 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 BEGAINQ9BUH8 593 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 MCOLN1Q9GZU1 580 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 CABP1Q9NZU7 370 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 USP47Q96K76 1375 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 SPATA31E1Q6ZUB1 1445 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 PXDNLA1KZ92 1463 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 KIAA1210Q9ULL0 1709 aa3.58□□□□□ -1.84
SNORD53-201ENST00000579969 TMEM88BA6NKF7 163 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 DLL1O00548 723 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 LMNB1P20700 586 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 SSFA2P28290 1259 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 SRPK2P78362 688 aaKnown RBP3.57□□□□□ -1.84
SNORD53-201ENST00000579969 TMF1P82094 1093 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 ANKRD36BQ8N2N9 1353 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 NLGN1Q8N2Q7 840 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 ZCRB1Q8TBF4 217 aaKnown RBP3.57□□□□□ -1.84
SNORD53-201ENST00000579969 CABP2Q9NPB3 220 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 CCDC87Q9NVE4 849 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 ZC3H4Q9UPT8 1303 aaKnown RBP3.57□□□□□ -1.84
SNORD53-201ENST00000579969 KDM2AQ9Y2K7 1162 aa3.57□□□□□ -1.84
SNORD53-201ENST00000579969 TNRC18O15417 2968 aaPredicted RBP3.57□□□□□ -1.84
SNORD53-201ENST00000579969 TUBGCP6Q96RT7 1819 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 COL18A1P39060 1754 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 CICQ96RK0 1608 aaPredicted RBP3.56□□□□□ -1.84
SNORD53-201ENST00000579969 TTC21BQ7Z4L5 1316 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 WDR33Q9C0J8 1336 aaKnown RBP3.56□□□□□ -1.84
SNORD53-201ENST00000579969 RASSF10A6NK89 507 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 POTEIP0CG38 1075 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 POTEJP0CG39 1038 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 DGKZQ13574 1117 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 TRAPPC3LQ5T215 181 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 MPRIPQ6WCQ1 1025 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 ANKRD24Q8TF21 1146 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 SMARCC1Q92922 1105 aaPredicted RBP3.56□□□□□ -1.84
SNORD53-201ENST00000579969 GCC1Q96CN9 775 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 ZNF692Q9BU19 519 aaPredicted RBP3.56□□□□□ -1.84
SNORD53-201ENST00000579969 TSKSQ9UJT2 592 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 PARP3Q9Y6F1 533 aa3.56□□□□□ -1.84
SNORD53-201ENST00000579969 TRPM1Q7Z4N2 1603 aa3.55□□□□□ -1.84
SNORD53-201ENST00000579969 CPSF1Q10570 1443 aaKnown RBP3.55□□□□□ -1.84
SNORD53-201ENST00000579969 NSD2O96028 1365 aa3.55□□□□□ -1.84
SNORD53-201ENST00000579969 PASKQ96RG2 1323 aa3.55□□□□□ -1.84
SNORD53-201ENST00000579969 GNPATO15228 680 aa3.55□□□□□ -1.84
SNORD53-201ENST00000579969 ITGBL1O95965 494 aaPredicted RBP3.55□□□□□ -1.84
SNORD53-201ENST00000579969 SOX10P56693 466 aa3.55□□□□□ -1.84
SNORD53-201ENST00000579969 RASSF7Q02833 373 aa3.55□□□□□ -1.84
SNORD53-201ENST00000579969 HABP4Q5JVS0 413 aaKnown RBP3.55□□□□□ -1.84
SNORD53-201ENST00000579969 LTV1Q96GA3 475 aaPredicted RBP3.55□□□□□ -1.84
SNORD53-201ENST00000579969 GPR101Q96P66 508 aaPredicted RBP3.55□□□□□ -1.84
SNORD53-201ENST00000579969 MPHOSPH9Q99550 1183 aa3.55□□□□□ -1.84
SNORD53-201ENST00000579969 ZNF219Q9P2Y4 722 aaPredicted RBP3.55□□□□□ -1.84
SNORD53-201ENST00000579969 RGPD5Q99666 1765 aa3.55□□□□□ -1.84
SNORD53-201ENST00000579969 ABCC6O95255 1503 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 N4BP2Q86UW6 1770 aaPredicted RBP3.54□□□□□ -1.84
SNORD53-201ENST00000579969 CHRNA5P30532 468 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 LDHDQ86WU2 507 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 LINC00116Q8NCU8 138 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 DCAF11Q8TEB1 546 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 ARHGEF1Q92888 912 aaKnown RBP3.54□□□□□ -1.84
SNORD53-201ENST00000579969 ABT1Q9ULW3 272 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms