RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 HOXC9P31274 260 aa17.73■□□□□ 0.43
CDK5RAP3-212ENST00000579175 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
CDK5RAP3-212ENST00000579175 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
CDK5RAP3-212ENST00000579175 C1QTNF8P60827 252 aa17.72■□□□□ 0.43
CDK5RAP3-212ENST00000579175 CCNL1Q9UK58 526 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-212ENST00000579175 ST20-MTHFSA0A0A6YYL1 179 aa17.71■□□□□ 0.43
CDK5RAP3-212ENST00000579175 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
CDK5RAP3-212ENST00000579175 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-212ENST00000579175 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
CDK5RAP3-212ENST00000579175 RAPGEF4Q8WZA2 1011 aa17.69■□□□□ 0.42
CDK5RAP3-212ENST00000579175 USP47Q96K76 1375 aa17.68■□□□□ 0.42
CDK5RAP3-212ENST00000579175 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-212ENST00000579175 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
CDK5RAP3-212ENST00000579175 GIGYF1O75420 1035 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP3-212ENST00000579175 NLGN2Q8NFZ4 835 aa17.67■□□□□ 0.42
CDK5RAP3-212ENST00000579175 GGNBP2Q9H3C7 697 aa17.67■□□□□ 0.42
CDK5RAP3-212ENST00000579175 DOT1LQ8TEK3 1739 aa17.67■□□□□ 0.42
CDK5RAP3-212ENST00000579175 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP3-212ENST00000579175 NBPF6Q5VWK0 638 aa17.66■□□□□ 0.42
CDK5RAP3-212ENST00000579175 NBPF4Q96M43 638 aa17.66■□□□□ 0.42
CDK5RAP3-212ENST00000579175 TESK2Q96S53 571 aa17.66■□□□□ 0.42
CDK5RAP3-212ENST00000579175 MSL1Q68DK7 614 aa17.65■□□□□ 0.42
CDK5RAP3-212ENST00000579175 COL23A1Q86Y22 540 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-212ENST00000579175 RGPD2P0DJD1 1756 aa17.65■□□□□ 0.42
CDK5RAP3-212ENST00000579175 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
CDK5RAP3-212ENST00000579175 QSER1Q2KHR3 1735 aa17.64■□□□□ 0.41
CDK5RAP3-212ENST00000579175 MEGF6O75095 1541 aa17.64■□□□□ 0.41
CDK5RAP3-212ENST00000579175 GRIN3BO60391 1043 aa17.63■□□□□ 0.41
CDK5RAP3-212ENST00000579175 CGNL1Q0VF96 1302 aa17.63■□□□□ 0.41
CDK5RAP3-212ENST00000579175 NSD2O96028 1365 aa17.63■□□□□ 0.41
CDK5RAP3-212ENST00000579175 FYB1O15117 783 aa17.62■□□□□ 0.41
CDK5RAP3-212ENST00000579175 TMF1P82094 1093 aa17.62■□□□□ 0.41
CDK5RAP3-212ENST00000579175 MPRIPQ6WCQ1 1025 aa17.62■□□□□ 0.41
CDK5RAP3-212ENST00000579175 TUBGCP6Q96RT7 1819 aa17.62■□□□□ 0.41
CDK5RAP3-212ENST00000579175 RTL1A6NKG5 1358 aa17.62■□□□□ 0.41
CDK5RAP3-212ENST00000579175 UTRNP46939 3433 aa17.62■□□□□ 0.41
CDK5RAP3-212ENST00000579175 LY75O60449 1722 aa17.61■□□□□ 0.41
CDK5RAP3-212ENST00000579175 HMGB2P26583 209 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-212ENST00000579175 YBX3P16989 372 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDK5RAP3-212ENST00000579175 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
CDK5RAP3-212ENST00000579175 PCDH11XQ9BZA7 1347 aa17.59■□□□□ 0.41
CDK5RAP3-212ENST00000579175 PCDH11YQ9BZA8 1340 aa17.59■□□□□ 0.41
CDK5RAP3-212ENST00000579175 FLAD1Q8NFF5 587 aa17.59■□□□□ 0.41
CDK5RAP3-212ENST00000579175 SHANK3Q9BYB0 1731 aa17.58■□□□□ 0.4
CDK5RAP3-212ENST00000579175 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
CDK5RAP3-212ENST00000579175 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-212ENST00000579175 AK7Q96M32 723 aa17.57■□□□□ 0.4
CDK5RAP3-212ENST00000579175 COL24A1Q17RW2 1714 aa17.57■□□□□ 0.4
CDK5RAP3-212ENST00000579175 CDCA8Q53HL2 280 aa17.56■□□□□ 0.4
CDK5RAP3-212ENST00000579175 INSRP06213 1382 aa17.55■□□□□ 0.4
CDK5RAP3-212ENST00000579175 PHF14O94880 888 aa17.55■□□□□ 0.4
CDK5RAP3-212ENST00000579175 SMARCC1Q92922 1105 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-212ENST00000579175 CD2APQ9Y5K6 639 aa17.55■□□□□ 0.4
CDK5RAP3-212ENST00000579175 FLT4P35916 1363 aa17.54■□□□□ 0.4
CDK5RAP3-212ENST00000579175 C5P01031 1676 aa17.53■□□□□ 0.4
CDK5RAP3-212ENST00000579175 CYP27B1O15528 508 aa17.53■□□□□ 0.4
CDK5RAP3-212ENST00000579175 WWC3Q9ULE0 1092 aa17.53■□□□□ 0.4
CDK5RAP3-212ENST00000579175 ZNF526Q8TF50 670 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-212ENST00000579175 GPBP1L1Q9HC44 474 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-212ENST00000579175 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
CDK5RAP3-212ENST00000579175 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
CDK5RAP3-212ENST00000579175 SMIM5Q71RC9 77 aa17.51■□□□□ 0.39
CDK5RAP3-212ENST00000579175 PIGBQ92521 554 aa17.5■□□□□ 0.39
CDK5RAP3-212ENST00000579175 ATP10DQ9P241 1426 aa17.49■□□□□ 0.39
CDK5RAP3-212ENST00000579175 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-212ENST00000579175 KIF24Q5T7B8 1368 aa17.49■□□□□ 0.39
CDK5RAP3-212ENST00000579175 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
CDK5RAP3-212ENST00000579175 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
CDK5RAP3-212ENST00000579175 TAF1LQ8IZX4 1826 aa17.47■□□□□ 0.39
CDK5RAP3-212ENST00000579175 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
CDK5RAP3-212ENST00000579175 SIK1P57059 783 aa17.47■□□□□ 0.39
CDK5RAP3-212ENST00000579175 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
CDK5RAP3-212ENST00000579175 ITGB4P16144 1822 aa17.47■□□□□ 0.39
CDK5RAP3-212ENST00000579175 C4BP0C0L5 1744 aa17.47■□□□□ 0.39
CDK5RAP3-212ENST00000579175 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
CDK5RAP3-212ENST00000579175 IGSF1Q8N6C5 1336 aa17.47■□□□□ 0.39
CDK5RAP3-212ENST00000579175 ATP6V1AP38606 617 aa17.46■□□□□ 0.39
CDK5RAP3-212ENST00000579175 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
CDK5RAP3-212ENST00000579175 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
CDK5RAP3-212ENST00000579175 GNPATO15228 680 aa17.45■□□□□ 0.38
CDK5RAP3-212ENST00000579175 SSFA2P28290 1259 aa17.45■□□□□ 0.38
CDK5RAP3-212ENST00000579175 EYA1Q99502 592 aa17.45■□□□□ 0.38
CDK5RAP3-212ENST00000579175 NKX1-1Q15270 411 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-212ENST00000579175 LINC00116Q8NCU8 138 aa17.44■□□□□ 0.38
CDK5RAP3-212ENST00000579175 ASAP1Q9ULH1 1129 aa17.44■□□□□ 0.38
CDK5RAP3-212ENST00000579175 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-212ENST00000579175 IFNL2Q8IZJ0 200 aa17.43■□□□□ 0.38
CDK5RAP3-212ENST00000579175 GOLGB1Q14789 3259 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-212ENST00000579175 TOGARAM1Q9Y4F4 1720 aa17.43■□□□□ 0.38
CDK5RAP3-212ENST00000579175 WASHC2AQ641Q2 1341 aa17.43■□□□□ 0.38
CDK5RAP3-212ENST00000579175 PHKG2P15735 406 aa17.41■□□□□ 0.38
CDK5RAP3-212ENST00000579175 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.41■□□□□ 0.381e-9■□□□□ 10.6
CDK5RAP3-212ENST00000579175 PKD1L3Q7Z443 1732 aa17.41■□□□□ 0.38
CDK5RAP3-212ENST00000579175 UBR3Q6ZT12 1888 aa17.4■□□□□ 0.38
CDK5RAP3-212ENST00000579175 MMP10P09238 476 aa17.4■□□□□ 0.38
CDK5RAP3-212ENST00000579175 ITPK1Q13572 414 aa17.4■□□□□ 0.38
CDK5RAP3-212ENST00000579175 IFFO2Q5TF58 517 aa17.4■□□□□ 0.38
CDK5RAP3-212ENST00000579175 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-212ENST00000579175 TRAPPC3LQ5T215 181 aa17.39■□□□□ 0.37
CDK5RAP3-212ENST00000579175 ATG3Q9NT62 314 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms