RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 KIF24Q5T7B8 1368 aa14.17□□□□□ -0.14
CTC1-204ENST00000578441 KAT6BQ8WYB5 2073 aa14.16□□□□□ -0.14
CTC1-204ENST00000578441 TMF1P82094 1093 aa14.16□□□□□ -0.14
CTC1-204ENST00000578441 CDCA8Q53HL2 280 aa14.16□□□□□ -0.14
CTC1-204ENST00000578441 SMG6Q86US8 1419 aaKnown RBP14.15□□□□□ -0.14
CTC1-204ENST00000578441 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
CTC1-204ENST00000578441 LRRC4BQ9NT99 713 aa14.15□□□□□ -0.14
CTC1-204ENST00000578441 KIF20BQ96Q89 1820 aa14.15□□□□□ -0.14
CTC1-204ENST00000578441 RGPD2P0DJD1 1756 aa14.14□□□□□ -0.15
CTC1-204ENST00000578441 USP47Q96K76 1375 aa14.14□□□□□ -0.15
CTC1-204ENST00000578441 GPR162Q16538 588 aa14.14□□□□□ -0.15
CTC1-204ENST00000578441 ZNF827Q17R98 1081 aa14.14□□□□□ -0.15
CTC1-204ENST00000578441 ZCRB1Q8TBF4 217 aaKnown RBP14.14□□□□□ -0.15
CTC1-204ENST00000578441 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
CTC1-204ENST00000578441 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
CTC1-204ENST00000578441 FYB1O15117 783 aa14.13□□□□□ -0.15
CTC1-204ENST00000578441 LTV1Q96GA3 475 aaPredicted RBP14.13□□□□□ -0.15
CTC1-204ENST00000578441 MEGF6O75095 1541 aa14.13□□□□□ -0.15
CTC1-204ENST00000578441 NSD2O96028 1365 aa14.11□□□□□ -0.15
CTC1-204ENST00000578441 INSRP06213 1382 aa14.11□□□□□ -0.15
CTC1-204ENST00000578441 FLT4P35916 1363 aa14.11□□□□□ -0.15
CTC1-204ENST00000578441 TUBGCP6Q96RT7 1819 aa14.11□□□□□ -0.15
CTC1-204ENST00000578441 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
CTC1-204ENST00000578441 SYTL4Q96C24 671 aaPredicted RBP14.11□□□□□ -0.15
CTC1-204ENST00000578441 POLD1P28340 1107 aa14.1□□□□□ -0.15
CTC1-204ENST00000578441 RAPGEF4Q8WZA2 1011 aa14.1□□□□□ -0.15
CTC1-204ENST00000578441 TIMELESSQ9UNS1 1208 aa14.1□□□□□ -0.15
CTC1-204ENST00000578441 PNPLA7Q6ZV29 1317 aa14.1□□□□□ -0.15
CTC1-204ENST00000578441 GRIN3BO60391 1043 aa14.09□□□□□ -0.15
CTC1-204ENST00000578441 RRS1Q15050 365 aaKnown RBP14.09□□□□□ -0.15
CTC1-204ENST00000578441 NBPF6Q5VWK0 638 aa14.09□□□□□ -0.15
CTC1-204ENST00000578441 NBPF4Q96M43 638 aa14.09□□□□□ -0.15
CTC1-204ENST00000578441 GGNBP2Q9H3C7 697 aa14.09□□□□□ -0.15
CTC1-204ENST00000578441 TFCP2L1Q9NZI6 479 aa14.09□□□□□ -0.15
CTC1-204ENST00000578441 PCDH11XQ9BZA7 1347 aa14.09□□□□□ -0.15
CTC1-204ENST00000578441 PCDH11YQ9BZA8 1340 aa14.09□□□□□ -0.15
CTC1-204ENST00000578441 ANKRD26Q9UPS8 1709 aa14.08□□□□□ -0.16
CTC1-204ENST00000578441 TATP17735 454 aaPredicted RBP14.08□□□□□ -0.16
CTC1-204ENST00000578441 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
CTC1-204ENST00000578441 C5P01031 1676 aa14.07□□□□□ -0.16
CTC1-204ENST00000578441 FBLN1P23142 703 aa14.07□□□□□ -0.16
CTC1-204ENST00000578441 CCNL1Q9UK58 526 aaPredicted RBP14.07□□□□□ -0.16
CTC1-204ENST00000578441 PKD1L3Q7Z443 1732 aa14.07□□□□□ -0.16
CTC1-204ENST00000578441 GOLGB1Q14789 3259 aaKnown RBP14.06□□□□□ -0.16
CTC1-204ENST00000578441 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
CTC1-204ENST00000578441 FLAD1Q8NFF5 587 aa14.05□□□□□ -0.16
CTC1-204ENST00000578441 CLSPNQ9HAW4 1339 aa14.05□□□□□ -0.16
CTC1-204ENST00000578441 PLEKHG2Q9H7P9 1386 aa14.05□□□□□ -0.16
CTC1-204ENST00000578441 TAF1LQ8IZX4 1826 aa14.04□□□□□ -0.16
CTC1-204ENST00000578441 HSP90AB2PQ58FF8 381 aa14.04□□□□□ -0.16
CTC1-204ENST00000578441 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
CTC1-204ENST00000578441 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
CTC1-204ENST00000578441 ITGB4P16144 1822 aa14.02□□□□□ -0.16
CTC1-204ENST00000578441 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.17
CTC1-204ENST00000578441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.02□□□□□ -0.17
CTC1-204ENST00000578441 TOGARAM1Q9Y4F4 1720 aa14.01□□□□□ -0.17
CTC1-204ENST00000578441 PALLDQ8WX93 1383 aa14.01□□□□□ -0.17
CTC1-204ENST00000578441 WASHC2AQ641Q2 1341 aa14.01□□□□□ -0.17
CTC1-204ENST00000578441 HSPA6P17066 643 aa14.01□□□□□ -0.17
CTC1-204ENST00000578441 KCNQ4P56696 695 aa14.01□□□□□ -0.17
CTC1-204ENST00000578441 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
CTC1-204ENST00000578441 NLGN2Q8NFZ4 835 aa14.01□□□□□ -0.17
CTC1-204ENST00000578441 CARD14Q9BXL6 1004 aa14.01□□□□□ -0.17
CTC1-204ENST00000578441 CYP27B1O15528 508 aa14□□□□□ -0.17
CTC1-204ENST00000578441 YBX3P16989 372 aaKnown RBP eCLIP14□□□□□ -0.17
CTC1-204ENST00000578441 SPG7Q9UQ90 795 aa14□□□□□ -0.17
CTC1-204ENST00000578441 C4BP0C0L5 1744 aa14□□□□□ -0.17
CTC1-204ENST00000578441 ATP10DQ9P241 1426 aa13.99□□□□□ -0.17
CTC1-204ENST00000578441 MAP2P11137 1827 aaKnown RBP13.99□□□□□ -0.17
CTC1-204ENST00000578441 ADCY9O60503 1353 aa13.99□□□□□ -0.17
CTC1-204ENST00000578441 COL23A1Q86Y22 540 aaPredicted RBP13.99□□□□□ -0.17
CTC1-204ENST00000578441 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
CTC1-204ENST00000578441 EMILIN1Q9Y6C2 1016 aa13.99□□□□□ -0.17
CTC1-204ENST00000578441 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
CTC1-204ENST00000578441 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
CTC1-204ENST00000578441 GPBP1L1Q9HC44 474 aaPredicted RBP13.98□□□□□ -0.17
CTC1-204ENST00000578441 CD2APQ9Y5K6 639 aa13.98□□□□□ -0.17
CTC1-204ENST00000578441 UBR3Q6ZT12 1888 aa13.97□□□□□ -0.17
CTC1-204ENST00000578441 MSH5O43196 834 aa13.97□□□□□ -0.17
CTC1-204ENST00000578441 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
CTC1-204ENST00000578441 AK7Q96M32 723 aa13.95□□□□□ -0.18
CTC1-204ENST00000578441 ZNF831Q5JPB2 1677 aa13.95□□□□□ -0.18
CTC1-204ENST00000578441 SSFA2P28290 1259 aa13.94□□□□□ -0.18
CTC1-204ENST00000578441 PIGBQ92521 554 aa13.94□□□□□ -0.18
CTC1-204ENST00000578441 POLKQ9UBT6 870 aa13.94□□□□□ -0.18
CTC1-204ENST00000578441 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
CTC1-204ENST00000578441 EYA1Q99502 592 aa13.93□□□□□ -0.18
CTC1-204ENST00000578441 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
CTC1-204ENST00000578441 LOC102724428A0A0B4J2F2 783 aa13.92□□□□□ -0.18
CTC1-204ENST00000578441 SIK1P57059 783 aa13.92□□□□□ -0.18
CTC1-204ENST00000578441 PHKG2P15735 406 aa13.91□□□□□ -0.18
CTC1-204ENST00000578441 MSL1Q68DK7 614 aa13.91□□□□□ -0.18
CTC1-204ENST00000578441 IGSF1Q8N6C5 1336 aa13.9□□□□□ -0.18
CTC1-204ENST00000578441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.9□□□□□ -0.18
CTC1-204ENST00000578441 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.18
CTC1-204ENST00000578441 ERVV-2B6SEH9 535 aa13.89□□□□□ -0.19
CTC1-204ENST00000578441 APLP1P51693 650 aa13.89□□□□□ -0.19
CTC1-204ENST00000578441 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
CTC1-204ENST00000578441 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
CTC1-204ENST00000578441 KIF3CO14782 793 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms