RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 MAP3K5Q99683 1374 aa29.63■■■□□ 2.33
LIMD2-205ENST00000578402 PRDM11Q9NQV5 511 aa29.63■■■□□ 2.33
LIMD2-205ENST00000578402 EXOSC9Q06265 439 aaKnown RBP29.62■■■□□ 2.33
LIMD2-205ENST00000578402 CHRNA2Q15822 529 aa29.62■■■□□ 2.33
LIMD2-205ENST00000578402 AMOTQ4VCS5 1084 aa29.62■■■□□ 2.33
LIMD2-205ENST00000578402 GNAT3A8MTJ3 354 aa29.61■■■□□ 2.33
LIMD2-205ENST00000578402 RARSP54136 660 aaKnown RBP29.61■■■□□ 2.33
LIMD2-205ENST00000578402 CRB1P82279 1406 aa29.61■■■□□ 2.33
LIMD2-205ENST00000578402 DCTN1Q14203 1278 aa29.61■■■□□ 2.33
LIMD2-205ENST00000578402 COL16A1Q07092 1604 aaPredicted RBP29.6■■■□□ 2.33
LIMD2-205ENST00000578402 PHLPP1O60346 1717 aa29.6■■■□□ 2.33
LIMD2-205ENST00000578402 PLEKHO1Q53GL0 409 aaPredicted RBP29.6■■■□□ 2.33
LIMD2-205ENST00000578402 ZNF428Q96B54 188 aa29.6■■■□□ 2.33
LIMD2-205ENST00000578402 PPP4R2Q9NY27 417 aa29.6■■■□□ 2.33
LIMD2-205ENST00000578402 MCM10Q7L590 875 aa29.59■■■□□ 2.33
LIMD2-205ENST00000578402 MBIPQ9NS73 344 aa29.58■■■□□ 2.33
LIMD2-205ENST00000578402 LAS1LQ9Y4W2 734 aaKnown RBP29.58■■■□□ 2.33
LIMD2-205ENST00000578402 NLRP2Q9NX02 1062 aa29.57■■■□□ 2.32
LIMD2-205ENST00000578402 CHL1O00533 1208 aa29.56■■■□□ 2.32
LIMD2-205ENST00000578402 CSB-PGBD3P0DP91 1061 aa29.56■■■□□ 2.32
LIMD2-205ENST00000578402 COL5A2P05997 1499 aaPredicted RBP29.56■■■□□ 2.32
LIMD2-205ENST00000578402 BCAR3O75815 825 aa29.55■■■□□ 2.32
LIMD2-205ENST00000578402 PLIN1O60240 522 aa29.55■■■□□ 2.32
LIMD2-205ENST00000578402 WDR17Q8IZU2 1322 aa29.54■■■□□ 2.32
LIMD2-205ENST00000578402 HSPA1LP34931 641 aa29.54■■■□□ 2.32
LIMD2-205ENST00000578402 AKAP4Q5JQC9 854 aa29.53■■■□□ 2.32
LIMD2-205ENST00000578402 RAPGEF4Q8WZA2 1011 aa29.52■■■□□ 2.32
LIMD2-205ENST00000578402 BABAM1Q9NWV8 329 aa29.52■■■□□ 2.32
LIMD2-205ENST00000578402 OVOS2A0A0G2JMS6 1433 aa29.52■■■□□ 2.32
LIMD2-205ENST00000578402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.51■■■□□ 2.32
LIMD2-205ENST00000578402 COL14A1Q05707 1796 aaKnown RBP29.51■■■□□ 2.31
LIMD2-205ENST00000578402 CEMIPQ8WUJ3 1361 aa29.51■■■□□ 2.31
LIMD2-205ENST00000578402 PIP4K2BP78356 416 aa29.5■■■□□ 2.31
LIMD2-205ENST00000578402 ALDH1L2Q3SY69 923 aa29.5■■■□□ 2.31
LIMD2-205ENST00000578402 ZNF530Q6P9A1 599 aaPredicted RBP29.5■■■□□ 2.31
LIMD2-205ENST00000578402 TATP17735 454 aaPredicted RBP29.49■■■□□ 2.31
LIMD2-205ENST00000578402 PDE3AQ14432 1141 aa29.48■■■□□ 2.31
LIMD2-205ENST00000578402 IL17REQ8NFR9 667 aa29.48■■■□□ 2.31
LIMD2-205ENST00000578402 MEGF6O75095 1541 aa29.47■■■□□ 2.31
LIMD2-205ENST00000578402 PKD1L3Q7Z443 1732 aa29.46■■■□□ 2.31
LIMD2-205ENST00000578402 C1orf141Q5JVX7 400 aa29.46■■■□□ 2.31
LIMD2-205ENST00000578402 VAMP4O75379 141 aa29.45■■■□□ 2.31
LIMD2-205ENST00000578402 BRPF1P55201 1214 aaPredicted RBP29.45■■■□□ 2.31
LIMD2-205ENST00000578402 ADAMTS7Q9UKP4 1686 aa29.45■■■□□ 2.31
LIMD2-205ENST00000578402 EXOC6Q8TAG9 804 aa29.45■■■□□ 2.3
LIMD2-205ENST00000578402 SSH1Q8WYL5 1049 aa29.45■■■□□ 2.3
LIMD2-205ENST00000578402 SMC4Q9NTJ3 1288 aa29.45■■■□□ 2.3
LIMD2-205ENST00000578402 PARP4Q9UKK3 1724 aaKnown RBP29.45■■■□□ 2.3
LIMD2-205ENST00000578402 CANXP27824 592 aaKnown RBP29.44■■■□□ 2.3
LIMD2-205ENST00000578402 TWISTNBQ3B726 338 aaPredicted RBP29.44■■■□□ 2.3
LIMD2-205ENST00000578402 C20orf194Q5TEA3 1177 aa29.44■■■□□ 2.3
LIMD2-205ENST00000578402 CARD10Q9BWT7 1032 aa29.44■■■□□ 2.3
LIMD2-205ENST00000578402 SPG7Q9UQ90 795 aa29.44■■■□□ 2.3
LIMD2-205ENST00000578402 TOM1L2Q6ZVM7 507 aa29.43■■■□□ 2.3
LIMD2-205ENST00000578402 TSPYL4Q9UJ04 414 aa29.43■■■□□ 2.3
LIMD2-205ENST00000578402 TAF7Q15545 349 aaPredicted RBP29.42■■■□□ 2.3
LIMD2-205ENST00000578402 CRBNQ96SW2 442 aa29.42■■■□□ 2.3
LIMD2-205ENST00000578402 KIF16BQ96L93 1317 aa29.41■■■□□ 2.3
LIMD2-205ENST00000578402 C8orf58Q8NAV2 365 aa29.41■■■□□ 2.3
LIMD2-205ENST00000578402 TSPYL6Q8N831 410 aa29.4■■■□□ 2.3
LIMD2-205ENST00000578402 BCL2L13Q9BXK5 485 aa29.4■■■□□ 2.3
LIMD2-205ENST00000578402 MS4A1P11836 297 aa29.4■■■□□ 2.3
LIMD2-205ENST00000578402 EVA1CP58658 441 aa29.4■■■□□ 2.3
LIMD2-205ENST00000578402 SOS1Q07889 1333 aaPredicted RBP29.39■■■□□ 2.3
LIMD2-205ENST00000578402 FRAT1Q92837 279 aaPredicted RBP29.39■■■□□ 2.3
LIMD2-205ENST00000578402 VIRMAQ69YN4 1812 aaKnown RBP29.38■■■□□ 2.29
LIMD2-205ENST00000578402 RNMTO43148 476 aaKnown RBP29.38■■■□□ 2.29
LIMD2-205ENST00000578402 ZKSCAN2Q63HK3 967 aa29.38■■■□□ 2.29
LIMD2-205ENST00000578402 LGR6Q9HBX8 967 aa29.36■■■□□ 2.29
LIMD2-205ENST00000578402 BTG4Q9NY30 223 aa29.36■■■□□ 2.29
LIMD2-205ENST00000578402 LARP1Q6PKG0 1096 aaKnown RBP29.35■■■□□ 2.29
LIMD2-205ENST00000578402 KDM3BQ7LBC6 1761 aa29.35■■■□□ 2.29
LIMD2-205ENST00000578402 IPO8O15397 1037 aaKnown RBP29.35■■■□□ 2.29
LIMD2-205ENST00000578402 PHKG2P15735 406 aa29.35■■■□□ 2.29
LIMD2-205ENST00000578402 IFNL2Q8IZJ0 200 aa29.35■■■□□ 2.29
LIMD2-205ENST00000578402 STRN4Q9NRL3 753 aa29.35■■■□□ 2.29
LIMD2-205ENST00000578402 TEFQ10587 303 aa29.34■■■□□ 2.29
LIMD2-205ENST00000578402 MPRIPQ6WCQ1 1025 aa29.34■■■□□ 2.29
LIMD2-205ENST00000578402 MIS18AQ9NYP9 233 aa29.34■■■□□ 2.29
LIMD2-205ENST00000578402 SIPA1L3O60292 1781 aaPredicted RBP29.33■■■□□ 2.29
LIMD2-205ENST00000578402 SCN11AQ9UI33 1791 aa29.33■■■□□ 2.29
LIMD2-205ENST00000578402 MRPL50Q8N5N7 158 aaKnown RBP29.33■■■□□ 2.29
LIMD2-205ENST00000578402 CCDC136Q96JN2 1154 aa29.33■■■□□ 2.29
LIMD2-205ENST00000578402 PLCH1Q4KWH8 1693 aa29.33■■■□□ 2.29
LIMD2-205ENST00000578402 ELL2O00472 640 aaPredicted RBP29.32■■■□□ 2.28
LIMD2-205ENST00000578402 HSP90AB1P08238 724 aaKnown RBP29.32■■■□□ 2.28
LIMD2-205ENST00000578402 IL2RBP14784 551 aa29.32■■■□□ 2.28
LIMD2-205ENST00000578402 B4GALNT3Q6L9W6 998 aa29.32■■■□□ 2.28
LIMD2-205ENST00000578402 ATF7IPQ6VMQ6 1270 aa29.31■■■□□ 2.28
LIMD2-205ENST00000578402 ARHGAP45Q92619 1136 aa29.31■■■□□ 2.28
LIMD2-205ENST00000578402 JCADQ9P266 1359 aa29.3■■■□□ 2.28
LIMD2-205ENST00000578402 PELP1Q8IZL8 1130 aaKnown RBP29.3■■■□□ 2.28
LIMD2-205ENST00000578402 AAMPQ13685 434 aa29.3■■■□□ 2.28
LIMD2-205ENST00000578402 NOB1Q9ULX3 412 aaKnown RBP29.3■■■□□ 2.28
LIMD2-205ENST00000578402 KDM6AO15550 1401 aaPredicted RBP29.29■■■□□ 2.28
LIMD2-205ENST00000578402 PCDH11XQ9BZA7 1347 aa29.28■■■□□ 2.28
LIMD2-205ENST00000578402 PCDH11YQ9BZA8 1340 aa29.28■■■□□ 2.28
LIMD2-205ENST00000578402 MRC1P22897 1456 aa29.28■■■□□ 2.28
LIMD2-205ENST00000578402 TRIM27P14373 513 aa29.28■■■□□ 2.28
LIMD2-205ENST00000578402 KRT24Q2M2I5 525 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms