RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ERCC4Q92889 916 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB3-201ENST00000576222 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 SERPINC1P01008 464 aa15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 RALYLQ86SE5 291 aaKnown RBP15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 RBM25P49756 843 aaKnown RBP15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 SCAND2PQ9GZW5 306 aaPredicted RBP15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 TTC12Q9H892 705 aaPredicted RBP15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
PCDHGB3-201ENST00000576222 SRGAP3O43295 1099 aa15.52■□□□□ 0.08
PCDHGB3-201ENST00000576222 APPP05067 770 aa15.52■□□□□ 0.08
PCDHGB3-201ENST00000576222 UBE2HP62256 183 aa15.52■□□□□ 0.08
PCDHGB3-201ENST00000576222 NUTM1Q86Y26 1132 aa15.52■□□□□ 0.08
PCDHGB3-201ENST00000576222 FAM177A1Q8N128 213 aaPredicted RBP15.52■□□□□ 0.08
PCDHGB3-201ENST00000576222 CALCOCO1Q9P1Z2 691 aa15.52■□□□□ 0.08
PCDHGB3-201ENST00000576222 TEX14Q8IWB6 1497 aa15.52■□□□□ 0.08
PCDHGB3-201ENST00000576222 CLIP2Q9UDT6 1046 aa15.52■□□□□ 0.08
PCDHGB3-201ENST00000576222 ADGRF5Q8IZF2 1346 aa15.52■□□□□ 0.07
PCDHGB3-201ENST00000576222 ZMYM4Q5VZL5 1548 aa15.52■□□□□ 0.07
PCDHGB3-201ENST00000576222 SDSP20132 328 aa15.52■□□□□ 0.07
PCDHGB3-201ENST00000576222 TMCO3Q6UWJ1 677 aa15.52■□□□□ 0.07
PCDHGB3-201ENST00000576222 CKAP2LQ8IYA6 745 aa15.52■□□□□ 0.07
PCDHGB3-201ENST00000576222 NEUROD6Q96NK8 337 aa15.52■□□□□ 0.07
PCDHGB3-201ENST00000576222 PIK3C2GO75747 1445 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 DCTN1Q14203 1278 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 SAFBQ15424 915 aaKnown RBP eCLIP15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 SPATA31E1Q6ZUB1 1445 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 STX6O43752 255 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 AIMP1Q12904 312 aaKnown RBP15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 SMAP1Q8IYB5 467 aaPredicted RBP15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 RUFY1Q96T51 708 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 TERF1P54274 439 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 AEBP2Q6ZN18 517 aaPredicted RBP15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 RBSNQ9H1K0 784 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 INSRP06213 1382 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 NFXL1Q6ZNB6 911 aa15.51■□□□□ 0.07
PCDHGB3-201ENST00000576222 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 TTLL5Q6EMB2 1281 aa15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 RIC3Q7Z5B4 369 aa15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 ARHGAP45Q92619 1136 aa15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 PCMTD1Q96MG8 357 aaPredicted RBP15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 SH2B1Q9NRF2 756 aaPredicted RBP15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 POLR3AO14802 1390 aaPredicted RBP15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 ZBTB40Q9NUA8 1239 aa15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 GIMAP6Q6P9H5 292 aa15.5■□□□□ 0.07
PCDHGB3-201ENST00000576222 GTPBP4Q9BZE4 634 aaKnown RBP15.49■□□□□ 0.07
PCDHGB3-201ENST00000576222 RRS1Q15050 365 aaKnown RBP15.49■□□□□ 0.07
PCDHGB3-201ENST00000576222 GPATCH8Q9UKJ3 1502 aaKnown RBP15.49■□□□□ 0.07
PCDHGB3-201ENST00000576222 LARP6Q9BRS8 491 aaKnown RBP15.49■□□□□ 0.07
PCDHGB3-201ENST00000576222 SFPQP23246 707 aaKnown RBP eCLIP15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 PRPF40BQ6NWY9 871 aaKnown RBP15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 USP48Q86UV5 1035 aa15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 ZGPATQ8N5A5 531 aaKnown RBP15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 DNAJC2Q99543 621 aaKnown RBP15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 SNAPC4Q5SXM2 1469 aa15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 BLMP54132 1417 aaPredicted RBP15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 TRMT1Q9NXH9 659 aaKnown RBP15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 WASHC4Q2M389 1173 aa15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 H0YHG0 523 aa15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 NEMFO60524 1076 aa15.48■□□□□ 0.07
PCDHGB3-201ENST00000576222 DHX16O60231 1041 aaKnown RBP15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 DDX19AQ9NUU7 478 aaKnown RBP15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 PAXBP1Q9Y5B6 917 aa15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 ZNF445P59923 1031 aa15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 KIF1BPQ96EK5 621 aa15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 UHRF1BP1Q6BDS2 1440 aa15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 FSD2A1L4K1 749 aa15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 CBFA2T2O43439 604 aa15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 ERLIN1O75477 346 aa15.47■□□□□ 0.07
PCDHGB3-201ENST00000576222 EIF3JO75822 258 aaKnown RBP15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 GLRX3O76003 335 aaKnown RBP15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 ZNF165P49910 485 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 DDX54Q8TDD1 881 aaKnown RBP15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 TSPYL1Q9H0U9 437 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 F6X3S4 739 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 TTC5Q8N0Z6 440 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 JMYQ8N9B5 988 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 TRERF1Q96PN7 1200 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 NUP160Q12769 1436 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 ARHGEF12Q9NZN5 1544 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 MCM10Q7L590 875 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 AACSQ86V21 672 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 DDX11Q96FC9 970 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 ANO10Q9NW15 660 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 NSD2O96028 1365 aa15.46■□□□□ 0.07
PCDHGB3-201ENST00000576222 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.06
PCDHGB3-201ENST00000576222 ZSCAN22P10073 491 aaPredicted RBP15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 MIS18AQ9NYP9 233 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 KRT32Q14532 448 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 SKIDA1Q1XH10 827 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 KRT222Q8N1A0 295 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 RAB11FIP3O75154 756 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 GJB2P29033 226 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 FILIP1LQ4L180 1135 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 MBIPQ9NS73 344 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms