RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 ERBB4Q15303 1308 aa21.27■■□□□ 1
TOM1L1-221ENST00000575882 MSH6P52701 1360 aa21.27■■□□□ 1
TOM1L1-221ENST00000575882 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
TOM1L1-221ENST00000575882 C3P01024 1663 aa21.26■□□□□ 0.99
TOM1L1-221ENST00000575882 EIF4A2Q14240 407 aaKnown RBP21.26■□□□□ 0.99
TOM1L1-221ENST00000575882 APBB1O00213 710 aa21.25■□□□□ 0.99
TOM1L1-221ENST00000575882 SMARCA5O60264 1052 aaPredicted RBP21.25■□□□□ 0.99
TOM1L1-221ENST00000575882 MCM10Q7L590 875 aa21.25■□□□□ 0.99
TOM1L1-221ENST00000575882 DDX49Q9Y6V7 483 aaKnown RBP21.25■□□□□ 0.99
TOM1L1-221ENST00000575882 NRKQ7Z2Y5 1582 aa21.25■□□□□ 0.99
TOM1L1-221ENST00000575882 CHL1O00533 1208 aa21.25■□□□□ 0.99
TOM1L1-221ENST00000575882 SDSP20132 328 aa21.25■□□□□ 0.99
TOM1L1-221ENST00000575882 KLHL40Q2TBA0 621 aa21.25■□□□□ 0.99
TOM1L1-221ENST00000575882 RTL1A6NKG5 1358 aa21.24■□□□□ 0.99
TOM1L1-221ENST00000575882 CASC1Q6TDU7 716 aa21.24■□□□□ 0.99
TOM1L1-221ENST00000575882 AKAP12Q02952 1782 aa21.24■□□□□ 0.99
TOM1L1-221ENST00000575882 MEIS3Q99687 375 aa21.23■□□□□ 0.99
TOM1L1-221ENST00000575882 ITSN1Q15811 1721 aa21.23■□□□□ 0.99
TOM1L1-221ENST00000575882 AGLP35573 1532 aa21.23■□□□□ 0.99
TOM1L1-221ENST00000575882 PTPRCP08575 1304 aa21.23■□□□□ 0.99
TOM1L1-221ENST00000575882 NUCB2P80303 420 aa21.23■□□□□ 0.99
TOM1L1-221ENST00000575882 KIAA0232Q92628 1395 aa21.22■□□□□ 0.99
TOM1L1-221ENST00000575882 MLECQ14165 292 aa21.22■□□□□ 0.99
TOM1L1-221ENST00000575882 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.22■□□□□ 0.99
TOM1L1-221ENST00000575882 PRR36Q9H6K5 1346 aa21.22■□□□□ 0.99
TOM1L1-221ENST00000575882 MCTP1Q6DN14 999 aa21.21■□□□□ 0.99
TOM1L1-221ENST00000575882 IBTKQ9P2D0 1353 aaPredicted RBP21.21■□□□□ 0.99
TOM1L1-221ENST00000575882 AK9Q5TCS8 1911 aa21.21■□□□□ 0.99
TOM1L1-221ENST00000575882 CYP2E1P05181 493 aaPredicted RBP21.2■□□□□ 0.98
TOM1L1-221ENST00000575882 NASPP49321 788 aaPredicted RBP21.2■□□□□ 0.98
TOM1L1-221ENST00000575882 SIRT1Q96EB6 747 aa21.19■□□□□ 0.98
TOM1L1-221ENST00000575882 TECPR2O15040 1411 aa21.19■□□□□ 0.98
TOM1L1-221ENST00000575882 ST18O60284 1047 aa21.19■□□□□ 0.98
TOM1L1-221ENST00000575882 PKP1Q13835 747 aa21.19■□□□□ 0.98
TOM1L1-221ENST00000575882 SLC4A2P04920 1241 aa21.18■□□□□ 0.98
TOM1L1-221ENST00000575882 CCDC173Q0VFZ6 552 aa21.18■□□□□ 0.98
TOM1L1-221ENST00000575882 REC8O95072 547 aa21.18■□□□□ 0.98
TOM1L1-221ENST00000575882 TTC21BQ7Z4L5 1316 aa21.18■□□□□ 0.98
TOM1L1-221ENST00000575882 FAM69CQ0P6D2 419 aa21.17■□□□□ 0.98
TOM1L1-221ENST00000575882 CWC22Q9HCG8 908 aaKnown RBP21.17■□□□□ 0.98
TOM1L1-221ENST00000575882 HSP90AB2PQ58FF8 381 aa21.16■□□□□ 0.98
TOM1L1-221ENST00000575882 ZGPATQ8N5A5 531 aaKnown RBP21.16■□□□□ 0.98
TOM1L1-221ENST00000575882 HMMRO75330 724 aa21.16■□□□□ 0.98
TOM1L1-221ENST00000575882 NCLP19338 710 aaKnown RBP21.16■□□□□ 0.98
TOM1L1-221ENST00000575882 PPP1R9BQ96SB3 815 aa21.16■□□□□ 0.98
TOM1L1-221ENST00000575882 LMBRD1Q9NUN5 540 aa21.16■□□□□ 0.98
TOM1L1-221ENST00000575882 CRB1P82279 1406 aa21.15■□□□□ 0.98
TOM1L1-221ENST00000575882 MIS18AQ9NYP9 233 aa21.15■□□□□ 0.98
TOM1L1-221ENST00000575882 ERC2O15083 957 aa21.15■□□□□ 0.98
TOM1L1-221ENST00000575882 CAVIN1Q6NZI2 390 aaKnown RBP21.15■□□□□ 0.98
TOM1L1-221ENST00000575882 ANP32BQ92688 251 aaKnown RBP21.15■□□□□ 0.98
TOM1L1-221ENST00000575882 OVOS2A0A0J9YW53 1432 aa21.14■□□□□ 0.98
TOM1L1-221ENST00000575882 OVOS2Q6IE36 1432 aa21.14■□□□□ 0.98
TOM1L1-221ENST00000575882 ZNF445P59923 1031 aa21.14■□□□□ 0.98
TOM1L1-221ENST00000575882 SLC4A10Q6U841 1118 aa21.14■□□□□ 0.98
TOM1L1-221ENST00000575882 ACEP12821 1306 aa21.13■□□□□ 0.97
TOM1L1-221ENST00000575882 PEAK1Q9H792 1746 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 F6X3S4 739 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 PDE1AP54750 535 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 ZSCAN23Q3MJ62 389 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 G2E3Q7L622 706 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 ROBO2Q9HCK4 1378 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 SOX12O15370 315 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 OSBPL3Q9H4L5 887 aa21.12■□□□□ 0.97
TOM1L1-221ENST00000575882 RGPD1P0DJD0 1748 aa21.11■□□□□ 0.97
TOM1L1-221ENST00000575882 NUTM2FA1L443 756 aa21.11■□□□□ 0.97
TOM1L1-221ENST00000575882 HDGFP51858 240 aaKnown RBP21.11■□□□□ 0.97
TOM1L1-221ENST00000575882 CCT4P50991 539 aaKnown RBP21.11■□□□□ 0.97
TOM1L1-221ENST00000575882 TSPYL4Q9UJ04 414 aa21.11■□□□□ 0.97
TOM1L1-221ENST00000575882 TSPOAP1O95153 1857 aa21.1■□□□□ 0.97
TOM1L1-221ENST00000575882 FOXO3O43524 673 aa21.1■□□□□ 0.97
TOM1L1-221ENST00000575882 ZDHHC9Q9Y397 364 aa21.1■□□□□ 0.97
TOM1L1-221ENST00000575882 PRPF40AO75400 957 aaKnown RBP21.1■□□□□ 0.97
TOM1L1-221ENST00000575882 RTF1Q92541 710 aaKnown RBP21.09■□□□□ 0.97
TOM1L1-221ENST00000575882 USP6P35125 1406 aa21.09■□□□□ 0.97
TOM1L1-221ENST00000575882 DIP2BQ9P265 1576 aa21.08■□□□□ 0.97
TOM1L1-221ENST00000575882 MAP3K19Q56UN5 1328 aa21.08■□□□□ 0.97
TOM1L1-221ENST00000575882 MTHFSDQ2M296 383 aaKnown RBP21.08■□□□□ 0.97
TOM1L1-221ENST00000575882 EXOC6BQ9Y2D4 811 aa21.08■□□□□ 0.96
TOM1L1-221ENST00000575882 ARHGEF10O15013 1369 aa21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 NALCNQ8IZF0 1738 aa21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 GNAI2P04899 355 aa21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 TSHZ3Q63HK5 1081 aa21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 ZSCAN30Q86W11 494 aa21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 GPT2Q8TD30 523 aa21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 USP31Q70CQ4 1352 aa21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 PLEKHG3A1L390 1219 aa21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 ESF1Q9H501 851 aaKnown RBP21.07■□□□□ 0.96
TOM1L1-221ENST00000575882 NEK4P51957 841 aa21.06■□□□□ 0.96
TOM1L1-221ENST00000575882 TOPAZ1Q8N9V7 1692 aa21.06■□□□□ 0.96
TOM1L1-221ENST00000575882 RBSNQ9H1K0 784 aa21.06■□□□□ 0.96
TOM1L1-221ENST00000575882 RBM27Q9P2N5 1060 aaKnown RBP21.06■□□□□ 0.96
TOM1L1-221ENST00000575882 CHAMP1Q96JM3 812 aa21.05■□□□□ 0.96
TOM1L1-221ENST00000575882 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.05■□□□□ 0.96
TOM1L1-221ENST00000575882 TMX3Q96JJ7 454 aa21.05■□□□□ 0.96
TOM1L1-221ENST00000575882 RIMS1Q86UR5 1692 aaKnown RBP21.04■□□□□ 0.96
TOM1L1-221ENST00000575882 PRIM1P49642 420 aaKnown RBP21.04■□□□□ 0.96
TOM1L1-221ENST00000575882 ESYT1Q9BSJ8 1104 aa21.04■□□□□ 0.96
TOM1L1-221ENST00000575882 STK31Q9BXU1 1019 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms