RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PRELPP51888 382 aa8.49□□□□□ -1.05
SMG6-219ENST00000575663 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
SMG6-219ENST00000575663 TUBGCP6Q96RT7 1819 aa8.49□□□□□ -1.05
SMG6-219ENST00000575663 NSD2O96028 1365 aa8.48□□□□□ -1.05
SMG6-219ENST00000575663 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
SMG6-219ENST00000575663 RGPD5Q99666 1765 aa8.48□□□□□ -1.05
SMG6-219ENST00000575663 NSD3Q9BZ95 1437 aa8.48□□□□□ -1.05
SMG6-219ENST00000575663 COL13A1Q5TAT6 717 aaPredicted RBP8.48□□□□□ -1.05
SMG6-219ENST00000575663 C16orf71Q8IYS4 520 aaPredicted RBP8.48□□□□□ -1.05
SMG6-219ENST00000575663 DNAJC5GQ8N7S2 189 aa8.48□□□□□ -1.05
SMG6-219ENST00000575663 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
SMG6-219ENST00000575663 CICQ96RK0 1608 aaPredicted RBP8.47□□□□□ -1.05
SMG6-219ENST00000575663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMG6-219ENST00000575663 WWC3Q9ULE0 1092 aa8.47□□□□□ -1.05
SMG6-219ENST00000575663 DOT1LQ8TEK3 1739 aa8.46□□□□□ -1.05
SMG6-219ENST00000575663 JMYQ8N9B5 988 aa8.46□□□□□ -1.06
SMG6-219ENST00000575663 RBM46Q8TBY0 533 aaKnown RBP8.46□□□□□ -1.06
SMG6-219ENST00000575663 AK7Q96M32 723 aa8.46□□□□□ -1.06
SMG6-219ENST00000575663 LY75O60449 1722 aa8.46□□□□□ -1.06
SMG6-219ENST00000575663 USP54Q70EL1 1684 aa8.45□□□□□ -1.06
SMG6-219ENST00000575663 FAM208AQ9UK61 1670 aaKnown RBP8.45□□□□□ -1.06
SMG6-219ENST00000575663 PALLDQ8WX93 1383 aa8.45□□□□□ -1.06
SMG6-219ENST00000575663 PLEKHG2Q9H7P9 1386 aa8.45□□□□□ -1.06
SMG6-219ENST00000575663 WDR90Q96KV7 1748 aa8.44□□□□□ -1.06
SMG6-219ENST00000575663 FSTL1Q12841 308 aa8.44□□□□□ -1.06
SMG6-219ENST00000575663 NME9Q86XW9 330 aa8.44□□□□□ -1.06
SMG6-219ENST00000575663 ZCRB1Q8TBF4 217 aaKnown RBP8.44□□□□□ -1.06
SMG6-219ENST00000575663 C5P01031 1676 aa8.43□□□□□ -1.06
SMG6-219ENST00000575663 PHF14O94880 888 aa8.43□□□□□ -1.06
SMG6-219ENST00000575663 HDGFL2Q7Z4V5 671 aaPredicted RBP8.43□□□□□ -1.06
SMG6-219ENST00000575663 IP6K1Q92551 441 aa8.43□□□□□ -1.06
SMG6-219ENST00000575663 LTV1Q96GA3 475 aaPredicted RBP8.43□□□□□ -1.06
SMG6-219ENST00000575663 NMRK2Q9NPI5 230 aa8.43□□□□□ -1.06
SMG6-219ENST00000575663 CGNL1Q0VF96 1302 aa8.43□□□□□ -1.06
SMG6-219ENST00000575663 EDC4Q6P2E9 1401 aaKnown RBP8.43□□□□□ -1.06
SMG6-219ENST00000575663 MON2Q7Z3U7 1717 aa8.43□□□□□ -1.06
SMG6-219ENST00000575663 LTN1O94822 1766 aa8.43□□□□□ -1.06
SMG6-219ENST00000575663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.42□□□□□ -1.06
SMG6-219ENST00000575663 SSFA2P28290 1259 aa8.42□□□□□ -1.06
SMG6-219ENST00000575663 BCS1LQ9Y276 419 aa8.42□□□□□ -1.06
SMG6-219ENST00000575663 SBNO2Q9Y2G9 1366 aa8.42□□□□□ -1.06
SMG6-219ENST00000575663 SMG6Q86US8 1419 aaKnown RBP8.42□□□□□ -1.06
SMG6-219ENST00000575663 MEGF6O75095 1541 aa8.42□□□□□ -1.06
SMG6-219ENST00000575663 PXDNLA1KZ92 1463 aa8.41□□□□□ -1.06
SMG6-219ENST00000575663 ROCK2O75116 1388 aaKnown RBP8.41□□□□□ -1.06
SMG6-219ENST00000575663 KDM2BQ8NHM5 1336 aa8.41□□□□□ -1.06
SMG6-219ENST00000575663 PCDH11XQ9BZA7 1347 aa8.41□□□□□ -1.06
SMG6-219ENST00000575663 PCDH11YQ9BZA8 1340 aa8.41□□□□□ -1.06
SMG6-219ENST00000575663 HTRA3P83110 453 aa8.41□□□□□ -1.06
SMG6-219ENST00000575663 RAPGEF4Q8WZA2 1011 aa8.41□□□□□ -1.06
SMG6-219ENST00000575663 SMARCC1Q92922 1105 aaPredicted RBP8.41□□□□□ -1.06
SMG6-219ENST00000575663 C4BP0C0L5 1744 aa8.4□□□□□ -1.06
SMG6-219ENST00000575663 C10orf71Q711Q0 1435 aa8.4□□□□□ -1.06
SMG6-219ENST00000575663 RTL1A6NKG5 1358 aa8.4□□□□□ -1.06
SMG6-219ENST00000575663 HSPA1AP0DMV8 641 aaKnown RBP8.4□□□□□ -1.06
SMG6-219ENST00000575663 HSPA1BP0DMV9 641 aaKnown RBP8.4□□□□□ -1.06
SMG6-219ENST00000575663 AMPHP49418 695 aa8.4□□□□□ -1.06
SMG6-219ENST00000575663 TGFB2P61812 414 aa8.4□□□□□ -1.06
SMG6-219ENST00000575663 ARHGAP27Q6ZUM4 889 aa8.4□□□□□ -1.06
SMG6-219ENST00000575663 TMC1Q8TDI8 760 aa8.4□□□□□ -1.06
SMG6-219ENST00000575663 CD163L1Q9NR16 1453 aa8.39□□□□□ -1.07
SMG6-219ENST00000575663 SLC34A2O95436 690 aa8.39□□□□□ -1.07
SMG6-219ENST00000575663 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
SMG6-219ENST00000575663 HOXC9P31274 260 aa8.39□□□□□ -1.07
SMG6-219ENST00000575663 MPRIPQ6WCQ1 1025 aa8.39□□□□□ -1.07
SMG6-219ENST00000575663 SMC1BQ8NDV3 1235 aa8.39□□□□□ -1.07
SMG6-219ENST00000575663 TERF2IPQ9NYB0 399 aa8.39□□□□□ -1.07
SMG6-219ENST00000575663 MAP3K19Q56UN5 1328 aa8.38□□□□□ -1.07
SMG6-219ENST00000575663 FCHSD2O94868 740 aa8.38□□□□□ -1.07
SMG6-219ENST00000575663 MMP10P09238 476 aa8.38□□□□□ -1.07
SMG6-219ENST00000575663 C9orf131Q5VYM1 1079 aa8.38□□□□□ -1.07
SMG6-219ENST00000575663 COG3Q96JB2 828 aa8.38□□□□□ -1.07
SMG6-219ENST00000575663 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
SMG6-219ENST00000575663 KAT6BQ8WYB5 2073 aa8.38□□□□□ -1.07
SMG6-219ENST00000575663 A0A1W2PP64 1363 aa8.37□□□□□ -1.07
SMG6-219ENST00000575663 GNPATO15228 680 aa8.37□□□□□ -1.07
SMG6-219ENST00000575663 AMIGO3Q86WK7 504 aa8.37□□□□□ -1.07
SMG6-219ENST00000575663 KCPQ6ZWJ8 1503 aa8.37□□□□□ -1.07
SMG6-219ENST00000575663 TOGARAM1Q9Y4F4 1720 aa8.37□□□□□ -1.07
SMG6-219ENST00000575663 A0A0G2JLW4 131 aa8.36□□□□□ -1.07
SMG6-219ENST00000575663 RNF181Q9P0P0 153 aa8.36□□□□□ -1.07
SMG6-219ENST00000575663 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
SMG6-219ENST00000575663 SIK1P57059 783 aa8.35□□□□□ -1.07
SMG6-219ENST00000575663 NLGN1Q8N2Q7 840 aa8.35□□□□□ -1.07
SMG6-219ENST00000575663 USHBP1Q8N6Y0 703 aa8.35□□□□□ -1.07
SMG6-219ENST00000575663 LINC00116Q8NCU8 138 aa8.35□□□□□ -1.07
SMG6-219ENST00000575663 PCNTO95613 3336 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 ZC3H4Q9UPT8 1303 aaKnown RBP8.34□□□□□ -1.07
SMG6-219ENST00000575663 TNRC6CQ9HCJ0 1690 aaKnown RBP8.34□□□□□ -1.07
SMG6-219ENST00000575663 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 DPEP1P16444 411 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 TMF1P82094 1093 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 NBPF6Q5VWK0 638 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 SMIM5Q71RC9 77 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 NBPF4Q96M43 638 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 SLC12A5Q9H2X9 1139 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 RRAGCQ9HB90 399 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 PARP3Q9Y6F1 533 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 UBR3Q6ZT12 1888 aa8.34□□□□□ -1.07
SMG6-219ENST00000575663 ATP6V1AP38606 617 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms