RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 COG3Q96JB2 828 aa18.32■□□□□ 0.52
ABR-228ENST00000574437 RBM33Q96EV2 1170 aaKnown RBP18.32■□□□□ 0.52
ABR-228ENST00000574437 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
ABR-228ENST00000574437 INTS3Q68E01 1043 aaKnown RBP18.32■□□□□ 0.52
ABR-228ENST00000574437 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
ABR-228ENST00000574437 PIK3R4Q99570 1358 aa18.31■□□□□ 0.52
ABR-228ENST00000574437 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
ABR-228ENST00000574437 SOX12O15370 315 aa18.3■□□□□ 0.52
ABR-228ENST00000574437 USP26Q9BXU7 913 aa18.3■□□□□ 0.52
ABR-228ENST00000574437 SDSP20132 328 aa18.3■□□□□ 0.52
ABR-228ENST00000574437 CCDC173Q0VFZ6 552 aa18.3■□□□□ 0.52
ABR-228ENST00000574437 NUCB2P80303 420 aa18.29■□□□□ 0.52
ABR-228ENST00000574437 AEBP1Q8IUX7 1158 aa18.29■□□□□ 0.52
ABR-228ENST00000574437 ZGPATQ8N5A5 531 aaKnown RBP18.29■□□□□ 0.52
ABR-228ENST00000574437 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
ABR-228ENST00000574437 MCM10Q7L590 875 aa18.29■□□□□ 0.52
ABR-228ENST00000574437 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
ABR-228ENST00000574437 AK9Q5TCS8 1911 aa18.29■□□□□ 0.52
ABR-228ENST00000574437 PRPF40AO75400 957 aaKnown RBP18.28■□□□□ 0.52
ABR-228ENST00000574437 SLC4A10Q6U841 1118 aa18.28■□□□□ 0.52
ABR-228ENST00000574437 ROBO2Q9HCK4 1378 aa18.28■□□□□ 0.52
ABR-228ENST00000574437 SULT6B1Q6IMI4 303 aa18.28■□□□□ 0.52
ABR-228ENST00000574437 ST18O60284 1047 aa18.28■□□□□ 0.52
ABR-228ENST00000574437 ANKRD44Q8N8A2 993 aa18.28■□□□□ 0.52
ABR-228ENST00000574437 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
ABR-228ENST00000574437 AMOTL2Q9Y2J4 779 aa18.28■□□□□ 0.52
ABR-228ENST00000574437 MSNP26038 577 aaKnown RBP18.27■□□□□ 0.52
ABR-228ENST00000574437 MEIS3Q99687 375 aa18.27■□□□□ 0.52
ABR-228ENST00000574437 ADAMTS13Q76LX8 1427 aa18.27■□□□□ 0.52
ABR-228ENST00000574437 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.52
ABR-228ENST00000574437 GLIPR1L2Q4G1C9 344 aa18.27■□□□□ 0.51
ABR-228ENST00000574437 ANKRD26Q9UPS8 1709 aa18.27■□□□□ 0.51
ABR-228ENST00000574437 NUDT16Q96DE0 195 aaKnown RBP18.26■□□□□ 0.51
ABR-228ENST00000574437 C3P01024 1663 aa18.26■□□□□ 0.51
ABR-228ENST00000574437 CEP85Q6P2H3 762 aa18.26■□□□□ 0.51
ABR-228ENST00000574437 UBR1Q8IWV7 1749 aa18.26■□□□□ 0.51
ABR-228ENST00000574437 NOL8Q76FK4 1167 aaKnown RBP18.26■□□□□ 0.51
ABR-228ENST00000574437 MIS18AQ9NYP9 233 aa18.26■□□□□ 0.51
ABR-228ENST00000574437 RBM27Q9P2N5 1060 aaKnown RBP18.26■□□□□ 0.51
ABR-228ENST00000574437 ZSCAN23Q3MJ62 389 aa18.25■□□□□ 0.51
ABR-228ENST00000574437 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
ABR-228ENST00000574437 MAP2P11137 1827 aaKnown RBP18.24■□□□□ 0.51
ABR-228ENST00000574437 ZSCAN30Q86W11 494 aa18.24■□□□□ 0.51
ABR-228ENST00000574437 LMBRD1Q9NUN5 540 aa18.24■□□□□ 0.51
ABR-228ENST00000574437 REC8O95072 547 aa18.23■□□□□ 0.51
ABR-228ENST00000574437 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
ABR-228ENST00000574437 TSHZ3Q63HK5 1081 aa18.23■□□□□ 0.51
ABR-228ENST00000574437 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
ABR-228ENST00000574437 FER1L4A9Z1Z3 1794 aa18.23■□□□□ 0.51
ABR-228ENST00000574437 MSH6P52701 1360 aa18.23■□□□□ 0.51
ABR-228ENST00000574437 KIF20BQ96Q89 1820 aa18.23■□□□□ 0.51
ABR-228ENST00000574437 PRR36Q9H6K5 1346 aa18.22■□□□□ 0.51
ABR-228ENST00000574437 F6X3S4 739 aa18.22■□□□□ 0.51
ABR-228ENST00000574437 CLEC17AQ6ZS10 378 aa18.22■□□□□ 0.51
ABR-228ENST00000574437 PPP1R9BQ96SB3 815 aa18.22■□□□□ 0.51
ABR-228ENST00000574437 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
ABR-228ENST00000574437 PRIM1P49642 420 aaKnown RBP18.21■□□□□ 0.51
ABR-228ENST00000574437 NEK4P51957 841 aa18.21■□□□□ 0.51
ABR-228ENST00000574437 VSIG10Q8N0Z9 540 aa18.21■□□□□ 0.51
ABR-228ENST00000574437 RBSNQ9H1K0 784 aa18.21■□□□□ 0.51
ABR-228ENST00000574437 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
ABR-228ENST00000574437 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.51
ABR-228ENST00000574437 FOXD4L6Q3SYB3 417 aaPredicted RBP18.21■□□□□ 0.51
ABR-228ENST00000574437 FOXD4L3Q6VB84 417 aaPredicted RBP18.21■□□□□ 0.51
ABR-228ENST00000574437 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
ABR-228ENST00000574437 PLEKHG1Q9ULL1 1385 aa18.21■□□□□ 0.5
ABR-228ENST00000574437 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
ABR-228ENST00000574437 ERC2O15083 957 aa18.2■□□□□ 0.5
ABR-228ENST00000574437 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
ABR-228ENST00000574437 CWC22Q9HCG8 908 aaKnown RBP18.2■□□□□ 0.5
ABR-228ENST00000574437 EDC4Q6P2E9 1401 aaKnown RBP18.2■□□□□ 0.5
ABR-228ENST00000574437 ATP7BP35670 1465 aa18.2■□□□□ 0.5
ABR-228ENST00000574437 KCNA6P17658 529 aa18.2■□□□□ 0.5
ABR-228ENST00000574437 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
ABR-228ENST00000574437 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
ABR-228ENST00000574437 HMMRO75330 724 aa18.19■□□□□ 0.5
ABR-228ENST00000574437 ZNF445P59923 1031 aa18.19■□□□□ 0.5
ABR-228ENST00000574437 RTL1A6NKG5 1358 aa18.19■□□□□ 0.5
ABR-228ENST00000574437 TPRNQ4KMQ1 711 aa18.18■□□□□ 0.5
ABR-228ENST00000574437 ATP10DQ9P241 1426 aa18.18■□□□□ 0.5
ABR-228ENST00000574437 CDK12Q9NYV4 1490 aaPredicted RBP18.18■□□□□ 0.5
ABR-228ENST00000574437 SYCE3A1L190 88 aa18.18■□□□□ 0.5
ABR-228ENST00000574437 CYP2E1P05181 493 aaPredicted RBP18.18■□□□□ 0.5
ABR-228ENST00000574437 RNF214Q8ND24 703 aa18.18■□□□□ 0.5
ABR-228ENST00000574437 GPT2Q8TD30 523 aa18.18■□□□□ 0.5
ABR-228ENST00000574437 RILPL2Q969X0 211 aa18.17■□□□□ 0.5
ABR-228ENST00000574437 TRIM6-TRIM34B2RNG4 842 aa18.17■□□□□ 0.5
ABR-228ENST00000574437 CHL1O00533 1208 aa18.17■□□□□ 0.5
ABR-228ENST00000574437 G2E3Q7L622 706 aa18.17■□□□□ 0.5
ABR-228ENST00000574437 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
ABR-228ENST00000574437 ZDHHC9Q9Y397 364 aa18.17■□□□□ 0.5
ABR-228ENST00000574437 TBX22Q9Y458 520 aa18.17■□□□□ 0.5
ABR-228ENST00000574437 HSP90AB2PQ58FF8 381 aa18.16■□□□□ 0.5
ABR-228ENST00000574437 KIF24Q5T7B8 1368 aa18.16■□□□□ 0.5
ABR-228ENST00000574437 KNDC1Q76NI1 1749 aa18.16■□□□□ 0.5
ABR-228ENST00000574437 IBTKQ9P2D0 1353 aaPredicted RBP18.16■□□□□ 0.5
ABR-228ENST00000574437 PDE1AP54750 535 aa18.16■□□□□ 0.5
ABR-228ENST00000574437 TPM2P07951 284 aa18.15■□□□□ 0.5
ABR-228ENST00000574437 NSFL1CQ9UNZ2 370 aaKnown RBP18.15■□□□□ 0.5
ABR-228ENST00000574437 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms