RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 PARP4Q9UKK3 1724 aaKnown RBP17.19■□□□□ 0.34
NPLOC4-214ENST00000573876 HMOX1P09601 288 aa17.19■□□□□ 0.34
NPLOC4-214ENST00000573876 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
NPLOC4-214ENST00000573876 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
NPLOC4-214ENST00000573876 MEGF6O75095 1541 aa17.18■□□□□ 0.34
NPLOC4-214ENST00000573876 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
NPLOC4-214ENST00000573876 PNISRQ8TF01 805 aaKnown RBP17.18■□□□□ 0.34
NPLOC4-214ENST00000573876 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
NPLOC4-214ENST00000573876 TNS2Q63HR2 1409 aa17.18■□□□□ 0.34
NPLOC4-214ENST00000573876 KDRP35968 1356 aa17.17■□□□□ 0.34
NPLOC4-214ENST00000573876 PLEKHO1Q53GL0 409 aaPredicted RBP17.17■□□□□ 0.34
NPLOC4-214ENST00000573876 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
NPLOC4-214ENST00000573876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.34
NPLOC4-214ENST00000573876 BRWD3Q6RI45 1802 aa17.17■□□□□ 0.34
NPLOC4-214ENST00000573876 PLEKHG2Q9H7P9 1386 aa17.16■□□□□ 0.34
NPLOC4-214ENST00000573876 RGPD1P0DJD0 1748 aa17.16■□□□□ 0.34
NPLOC4-214ENST00000573876 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
NPLOC4-214ENST00000573876 FAM9BQ8IZU0 186 aa17.16■□□□□ 0.34
NPLOC4-214ENST00000573876 ADAMTS8Q9UP79 889 aa17.16■□□□□ 0.34
NPLOC4-214ENST00000573876 LRRC37A3O60309 1634 aa17.15■□□□□ 0.34
NPLOC4-214ENST00000573876 NEFMP07197 916 aa17.15■□□□□ 0.34
NPLOC4-214ENST00000573876 FAM196AQ6ZSG2 479 aa17.15■□□□□ 0.34
NPLOC4-214ENST00000573876 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
NPLOC4-214ENST00000573876 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
NPLOC4-214ENST00000573876 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
NPLOC4-214ENST00000573876 FCHSD2O94868 740 aa17.14■□□□□ 0.33
NPLOC4-214ENST00000573876 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
NPLOC4-214ENST00000573876 FAM182BQ5T319 152 aa17.13■□□□□ 0.33
NPLOC4-214ENST00000573876 KAT6BQ8WYB5 2073 aa17.12■□□□□ 0.33
NPLOC4-214ENST00000573876 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
NPLOC4-214ENST00000573876 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
NPLOC4-214ENST00000573876 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
NPLOC4-214ENST00000573876 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
NPLOC4-214ENST00000573876 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
NPLOC4-214ENST00000573876 EP400Q96L91 3159 aa17.1■□□□□ 0.33
NPLOC4-214ENST00000573876 CYP27B1O15528 508 aa17.09■□□□□ 0.33
NPLOC4-214ENST00000573876 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
NPLOC4-214ENST00000573876 GAS2L2Q8NHY3 880 aa17.09■□□□□ 0.33
NPLOC4-214ENST00000573876 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
NPLOC4-214ENST00000573876 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.32
NPLOC4-214ENST00000573876 PHKG2P15735 406 aa17.08■□□□□ 0.32
NPLOC4-214ENST00000573876 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-214ENST00000573876 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
NPLOC4-214ENST00000573876 BCL9O00512 1426 aa17.07■□□□□ 0.32
NPLOC4-214ENST00000573876 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
NPLOC4-214ENST00000573876 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
NPLOC4-214ENST00000573876 CCDC125Q86Z20 511 aa17.06■□□□□ 0.32
NPLOC4-214ENST00000573876 PHACTR3Q96KR7 559 aa17.06■□□□□ 0.32
NPLOC4-214ENST00000573876 TRIM37O94972 964 aa17.05■□□□□ 0.32
NPLOC4-214ENST00000573876 NKX1-1Q15270 411 aaPredicted RBP17.05■□□□□ 0.32
NPLOC4-214ENST00000573876 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
NPLOC4-214ENST00000573876 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
NPLOC4-214ENST00000573876 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
NPLOC4-214ENST00000573876 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.321e-7■■■■□ 20.1
NPLOC4-214ENST00000573876 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
NPLOC4-214ENST00000573876 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
NPLOC4-214ENST00000573876 SYTL4Q96C24 671 aaPredicted RBP17.03■□□□□ 0.32
NPLOC4-214ENST00000573876 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
NPLOC4-214ENST00000573876 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.32
NPLOC4-214ENST00000573876 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
NPLOC4-214ENST00000573876 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
NPLOC4-214ENST00000573876 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
NPLOC4-214ENST00000573876 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
NPLOC4-214ENST00000573876 RTF1Q92541 710 aaKnown RBP17.01■□□□□ 0.31
NPLOC4-214ENST00000573876 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
NPLOC4-214ENST00000573876 ERVV-2B6SEH9 535 aa17■□□□□ 0.31
NPLOC4-214ENST00000573876 APAF1O14727 1248 aa17■□□□□ 0.31
NPLOC4-214ENST00000573876 KCNQ2O43526 872 aa17■□□□□ 0.31
NPLOC4-214ENST00000573876 APBA3O96018 575 aa17■□□□□ 0.31
NPLOC4-214ENST00000573876 NEUROD2Q15784 382 aa17■□□□□ 0.31
NPLOC4-214ENST00000573876 BAG6P46379 1132 aa16.99■□□□□ 0.31
NPLOC4-214ENST00000573876 CABP4P57796 275 aa16.99■□□□□ 0.31
NPLOC4-214ENST00000573876 TMOD3Q9NYL9 352 aa16.99■□□□□ 0.31
NPLOC4-214ENST00000573876 SBF2Q86WG5 1849 aa16.98■□□□□ 0.31
NPLOC4-214ENST00000573876 RNMTO43148 476 aaKnown RBP16.98■□□□□ 0.31
NPLOC4-214ENST00000573876 HTATSF1O43719 755 aaKnown RBP16.98■□□□□ 0.31
NPLOC4-214ENST00000573876 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
NPLOC4-214ENST00000573876 TMPOP42166 694 aaKnown RBP16.97■□□□□ 0.31
NPLOC4-214ENST00000573876 RIPK4P57078 832 aa16.97■□□□□ 0.31
NPLOC4-214ENST00000573876 SALL2Q9Y467 1007 aaPredicted RBP16.97■□□□□ 0.31
NPLOC4-214ENST00000573876 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.31
NPLOC4-214ENST00000573876 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
NPLOC4-214ENST00000573876 TEFQ10587 303 aa16.96■□□□□ 0.31
NPLOC4-214ENST00000573876 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
NPLOC4-214ENST00000573876 NHSQ6T4R5 1651 aa16.96■□□□□ 0.31
NPLOC4-214ENST00000573876 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.3
NPLOC4-214ENST00000573876 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
NPLOC4-214ENST00000573876 PIGBQ92521 554 aa16.94■□□□□ 0.3
NPLOC4-214ENST00000573876 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
NPLOC4-214ENST00000573876 SLC52A2Q9HAB3 445 aa16.94■□□□□ 0.3
NPLOC4-214ENST00000573876 PLSCR1O15162 318 aa16.93■□□□□ 0.3
NPLOC4-214ENST00000573876 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
NPLOC4-214ENST00000573876 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
NPLOC4-214ENST00000573876 IL17REQ8NFR9 667 aa16.93■□□□□ 0.3
NPLOC4-214ENST00000573876 EN1Q05925 392 aaPredicted RBP16.92■□□□□ 0.3
NPLOC4-214ENST00000573876 MCM10Q7L590 875 aa16.92■□□□□ 0.3
NPLOC4-214ENST00000573876 TNS1Q9HBL0 1735 aaKnown RBP16.92■□□□□ 0.3
NPLOC4-214ENST00000573876 TOGARAM1Q9Y4F4 1720 aa16.92■□□□□ 0.3
NPLOC4-214ENST00000573876 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
NPLOC4-214ENST00000573876 ITGB4P16144 1822 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms