RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
NPLOC4-212ENST00000573328 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
NPLOC4-212ENST00000573328 RAPGEF4Q8WZA2 1011 aa13.32□□□□□ -0.28
NPLOC4-212ENST00000573328 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-212ENST00000573328 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-212ENST00000573328 LY75O60449 1722 aa13.31□□□□□ -0.28
NPLOC4-212ENST00000573328 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
NPLOC4-212ENST00000573328 ZCRB1Q8TBF4 217 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-212ENST00000573328 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
NPLOC4-212ENST00000573328 SPON1Q9HCB6 807 aa13.31□□□□□ -0.28
NPLOC4-212ENST00000573328 EMILIN1Q9Y6C2 1016 aa13.31□□□□□ -0.28
NPLOC4-212ENST00000573328 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
NPLOC4-212ENST00000573328 PKD1L3Q7Z443 1732 aa13.3□□□□□ -0.28
NPLOC4-212ENST00000573328 ITGB4P16144 1822 aa13.3□□□□□ -0.28
NPLOC4-212ENST00000573328 TUBGCP6Q96RT7 1819 aa13.3□□□□□ -0.28
NPLOC4-212ENST00000573328 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-212ENST00000573328 PROM2Q8N271 834 aa13.3□□□□□ -0.28
NPLOC4-212ENST00000573328 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-212ENST00000573328 QSER1Q2KHR3 1735 aa13.29□□□□□ -0.28
NPLOC4-212ENST00000573328 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.28
NPLOC4-212ENST00000573328 SLC15A2Q16348 729 aa13.27□□□□□ -0.29
NPLOC4-212ENST00000573328 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.29
NPLOC4-212ENST00000573328 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.29
NPLOC4-212ENST00000573328 ZBTB7AO95365 584 aa13.26□□□□□ -0.29
NPLOC4-212ENST00000573328 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-212ENST00000573328 PANK3Q9H999 370 aa13.26□□□□□ -0.29
NPLOC4-212ENST00000573328 C5P01031 1676 aa13.25□□□□□ -0.29
NPLOC4-212ENST00000573328 PDGFDQ9GZP0 370 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-212ENST00000573328 TAF1LQ8IZX4 1826 aa13.25□□□□□ -0.29
NPLOC4-212ENST00000573328 NSD2O96028 1365 aa13.24□□□□□ -0.29
NPLOC4-212ENST00000573328 WASHC2AQ641Q2 1341 aa13.24□□□□□ -0.29
NPLOC4-212ENST00000573328 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
NPLOC4-212ENST00000573328 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
NPLOC4-212ENST00000573328 LRRC4BQ9NT99 713 aa13.23□□□□□ -0.29
NPLOC4-212ENST00000573328 POLKQ9UBT6 870 aa13.23□□□□□ -0.29
NPLOC4-212ENST00000573328 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
NPLOC4-212ENST00000573328 ZNF827Q17R98 1081 aa13.22□□□□□ -0.29
NPLOC4-212ENST00000573328 KNSTRNQ9Y448 316 aa13.22□□□□□ -0.29
NPLOC4-212ENST00000573328 KCNQ4P56696 695 aa13.21□□□□□ -0.29
NPLOC4-212ENST00000573328 MORC1Q86VD1 984 aa13.21□□□□□ -0.29
NPLOC4-212ENST00000573328 EYA1Q99502 592 aa13.21□□□□□ -0.29
NPLOC4-212ENST00000573328 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.29
NPLOC4-212ENST00000573328 SPG7Q9UQ90 795 aa13.21□□□□□ -0.29
NPLOC4-212ENST00000573328 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
NPLOC4-212ENST00000573328 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-212ENST00000573328 MPRIPQ6WCQ1 1025 aa13.2□□□□□ -0.3
NPLOC4-212ENST00000573328 MTFR1LQ9H019 292 aa13.2□□□□□ -0.3
NPLOC4-212ENST00000573328 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
NPLOC4-212ENST00000573328 VIRMAQ69YN4 1812 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-212ENST00000573328 CYP27B1O15528 508 aa13.19□□□□□ -0.3
NPLOC4-212ENST00000573328 TFCP2L1Q9NZI6 479 aa13.19□□□□□ -0.3
NPLOC4-212ENST00000573328 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
NPLOC4-212ENST00000573328 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
NPLOC4-212ENST00000573328 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
NPLOC4-212ENST00000573328 PTGER2P43116 358 aa13.17□□□□□ -0.3
NPLOC4-212ENST00000573328 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
NPLOC4-212ENST00000573328 MSH5O43196 834 aa13.16□□□□□ -0.3
NPLOC4-212ENST00000573328 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
NPLOC4-212ENST00000573328 PNPLA7Q6ZV29 1317 aa13.15□□□□□ -0.3
NPLOC4-212ENST00000573328 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
NPLOC4-212ENST00000573328 IFNL2Q8IZJ0 200 aa13.15□□□□□ -0.3
NPLOC4-212ENST00000573328 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
NPLOC4-212ENST00000573328 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-212ENST00000573328 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
NPLOC4-212ENST00000573328 CHD4Q14839 1912 aa13.14□□□□□ -0.31
NPLOC4-212ENST00000573328 PHKG2P15735 406 aa13.14□□□□□ -0.31
NPLOC4-212ENST00000573328 POLD1P28340 1107 aa13.14□□□□□ -0.31
NPLOC4-212ENST00000573328 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
NPLOC4-212ENST00000573328 ARXQ96QS3 562 aa13.14□□□□□ -0.31
NPLOC4-212ENST00000573328 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-212ENST00000573328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.313e-10■■□□□ 13.6
NPLOC4-212ENST00000573328 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
NPLOC4-212ENST00000573328 HMGB2P26583 209 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-212ENST00000573328 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-212ENST00000573328 NKX1-1Q15270 411 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-212ENST00000573328 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
NPLOC4-212ENST00000573328 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-212ENST00000573328 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-212ENST00000573328 CC2D1BQ5T0F9 858 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-212ENST00000573328 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-212ENST00000573328 PIGBQ92521 554 aa13.12□□□□□ -0.31
NPLOC4-212ENST00000573328 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
NPLOC4-212ENST00000573328 AK7Q96M32 723 aa13.11□□□□□ -0.31
NPLOC4-212ENST00000573328 SYT17Q9BSW7 474 aa13.11□□□□□ -0.31
NPLOC4-212ENST00000573328 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-212ENST00000573328 YY1P25490 414 aa13.1□□□□□ -0.31
NPLOC4-212ENST00000573328 C1orf141Q5JVX7 400 aa13.1□□□□□ -0.31
NPLOC4-212ENST00000573328 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
NPLOC4-212ENST00000573328 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
NPLOC4-212ENST00000573328 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-212ENST00000573328 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
NPLOC4-212ENST00000573328 MSL1Q68DK7 614 aa13.09□□□□□ -0.31
NPLOC4-212ENST00000573328 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-212ENST00000573328 LOC102724428A0A0B4J2F2 783 aa13.08□□□□□ -0.32
NPLOC4-212ENST00000573328 PHF14O94880 888 aa13.08□□□□□ -0.32
NPLOC4-212ENST00000573328 MTHFSP49914 203 aa13.08□□□□□ -0.32
NPLOC4-212ENST00000573328 SIK1P57059 783 aa13.08□□□□□ -0.32
NPLOC4-212ENST00000573328 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
NPLOC4-212ENST00000573328 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
NPLOC4-212ENST00000573328 ASAP1Q9ULH1 1129 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms