RNA–Protein interactions for RNA: ENST00000572965.1

RPH3AL-209, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 2

Gene RPH3AL, Length 880 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-209ENST00000572965 DDX54Q8TDD1 881 aaKnown RBP25.25■■□□□ 1.63
RPH3AL-209ENST00000572965 PLEKHG2Q9H7P9 1386 aa25.25■■□□□ 1.63
RPH3AL-209ENST00000572965 HMOX1P09601 288 aa25.24■■□□□ 1.63
RPH3AL-209ENST00000572965 RGPD1P0DJD0 1748 aa25.23■■□□□ 1.63
RPH3AL-209ENST00000572965 PCDH11XQ9BZA7 1347 aa25.23■■□□□ 1.63
RPH3AL-209ENST00000572965 PCDH11YQ9BZA8 1340 aa25.23■■□□□ 1.63
RPH3AL-209ENST00000572965 U2AF1L5P0DN76 240 aaPredicted RBP25.23■■□□□ 1.63
RPH3AL-209ENST00000572965 U2AF1Q01081 240 aaKnown RBP eCLIP25.23■■□□□ 1.63
RPH3AL-209ENST00000572965 FAM182BQ5T319 152 aa25.23■■□□□ 1.63
RPH3AL-209ENST00000572965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.23■■□□□ 1.63
RPH3AL-209ENST00000572965 KDRP35968 1356 aa25.22■■□□□ 1.63
RPH3AL-209ENST00000572965 PLEKHO1Q53GL0 409 aaPredicted RBP25.22■■□□□ 1.63
RPH3AL-209ENST00000572965 AEBP1Q8IUX7 1158 aa25.22■■□□□ 1.63
RPH3AL-209ENST00000572965 SOCS7O14512 581 aa25.21■■□□□ 1.63
RPH3AL-209ENST00000572965 SF3B2Q13435 895 aaKnown RBP25.21■■□□□ 1.63
RPH3AL-209ENST00000572965 AMOTQ4VCS5 1084 aa25.21■■□□□ 1.63
RPH3AL-209ENST00000572965 MARCH10Q8NA82 808 aaPredicted RBP25.21■■□□□ 1.63
RPH3AL-209ENST00000572965 NEFMP07197 916 aa25.19■■□□□ 1.62
RPH3AL-209ENST00000572965 CCDC125Q86Z20 511 aa25.18■■□□□ 1.62
RPH3AL-209ENST00000572965 WDR43Q15061 677 aaKnown RBP eCLIP25.17■■□□□ 1.62
RPH3AL-209ENST00000572965 PNNQ9H307 717 aaKnown RBP25.17■■□□□ 1.62
RPH3AL-209ENST00000572965 PKD1L3Q7Z443 1732 aa25.16■■□□□ 1.62
RPH3AL-209ENST00000572965 C1orf141Q5JVX7 400 aa25.15■■□□□ 1.62
RPH3AL-209ENST00000572965 IFNL2Q8IZJ0 200 aa25.15■■□□□ 1.62
RPH3AL-209ENST00000572965 FCHSD2O94868 740 aa25.14■■□□□ 1.62
RPH3AL-209ENST00000572965 ZNF530Q6P9A1 599 aaPredicted RBP25.14■■□□□ 1.62
RPH3AL-209ENST00000572965 UPF1Q92900 1129 aaKnown RBP eCLIP25.14■■□□□ 1.62
RPH3AL-209ENST00000572965 BCL9O00512 1426 aa25.13■■□□□ 1.61
RPH3AL-209ENST00000572965 TRIM37O94972 964 aa25.12■■□□□ 1.61
RPH3AL-209ENST00000572965 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
RPH3AL-209ENST00000572965 PRKAR2BP31323 418 aa25.12■■□□□ 1.61
RPH3AL-209ENST00000572965 RSPH6AQ9H0K4 717 aa25.11■■□□□ 1.61
RPH3AL-209ENST00000572965 SHANK3Q9BYB0 1731 aa25.1■■□□□ 1.61
RPH3AL-209ENST00000572965 CYP27B1O15528 508 aa25.1■■□□□ 1.61
RPH3AL-209ENST00000572965 DIEXFQ68CQ4 756 aaKnown RBP25.1■■□□□ 1.61
RPH3AL-209ENST00000572965 KAT6BQ8WYB5 2073 aa25.09■■□□□ 1.61
RPH3AL-209ENST00000572965 PHKG2P15735 406 aa25.09■■□□□ 1.61
RPH3AL-209ENST00000572965 GAS2L2Q8NHY3 880 aa25.09■■□□□ 1.61
RPH3AL-209ENST00000572965 ACSBG1Q96GR2 724 aa25.09■■□□□ 1.61
RPH3AL-209ENST00000572965 MRS2Q9HD23 443 aa25.09■■□□□ 1.61
RPH3AL-209ENST00000572965 SYTL4Q96C24 671 aaPredicted RBP25.08■■□□□ 1.61
RPH3AL-209ENST00000572965 MAPK8IP3Q9UPT6 1336 aa25.08■■□□□ 1.6
RPH3AL-209ENST00000572965 BAG6P46379 1132 aa25.07■■□□□ 1.6
RPH3AL-209ENST00000572965 BCL11BQ9C0K0 894 aaPredicted RBP25.07■■□□□ 1.6
RPH3AL-209ENST00000572965 AKAP4Q5JQC9 854 aa25.06■■□□□ 1.6
RPH3AL-209ENST00000572965 APBA3O96018 575 aa25.05■■□□□ 1.6
RPH3AL-209ENST00000572965 NKX1-1Q15270 411 aaPredicted RBP25.05■■□□□ 1.6
RPH3AL-209ENST00000572965 MTHFSDQ2M296 383 aaKnown RBP25.04■■□□□ 1.6
RPH3AL-209ENST00000572965 DCAF5Q96JK2 942 aa25.04■■□□□ 1.6
RPH3AL-209ENST00000572965 SBF2Q86WG5 1849 aa25.03■■□□□ 1.6
RPH3AL-209ENST00000572965 NHSQ6T4R5 1651 aa25.02■■□□□ 1.6
RPH3AL-209ENST00000572965 PRIM1P49642 420 aaKnown RBP25.02■■□□□ 1.6
RPH3AL-209ENST00000572965 DOT1LQ8TEK3 1739 aa25.01■■□□□ 1.59
RPH3AL-209ENST00000572965 EP400Q96L91 3159 aa25.01■■□□□ 1.59
RPH3AL-209ENST00000572965 KCNQ2O43526 872 aa25■■□□□ 1.59
RPH3AL-209ENST00000572965 PHACTR3Q96KR7 559 aa25■■□□□ 1.59
RPH3AL-209ENST00000572965 GNAT3A8MTJ3 354 aa24.99■■□□□ 1.59
RPH3AL-209ENST00000572965 TMOD3Q9NYL9 352 aa24.99■■□□□ 1.59
RPH3AL-209ENST00000572965 ADAMTS8Q9UP79 889 aa24.99■■□□□ 1.59
RPH3AL-209ENST00000572965 TNS1Q9HBL0 1735 aaKnown RBP24.98■■□□□ 1.59
RPH3AL-209ENST00000572965 MAP3K5Q99683 1374 aa24.98■■□□□ 1.59
RPH3AL-209ENST00000572965 ERVV-2B6SEH9 535 aa24.98■■□□□ 1.59
RPH3AL-209ENST00000572965 MPRIPQ6WCQ1 1025 aa24.98■■□□□ 1.59
RPH3AL-209ENST00000572965 RTF1Q92541 710 aaKnown RBP24.98■■□□□ 1.59
RPH3AL-209ENST00000572965 CABP4P57796 275 aa24.97■■□□□ 1.59
RPH3AL-209ENST00000572965 CCDC184Q52MB2 194 aa24.97■■□□□ 1.59
RPH3AL-209ENST00000572965 RUNDC1Q96C34 613 aa24.96■■□□□ 1.59
RPH3AL-209ENST00000572965 PLEKHF1Q96S99 279 aa24.96■■□□□ 1.59
RPH3AL-209ENST00000572965 DEFB132Q7Z7B7 95 aa24.95■■□□□ 1.58
RPH3AL-209ENST00000572965 EN1Q05925 392 aaPredicted RBP24.94■■□□□ 1.58
RPH3AL-209ENST00000572965 CCDC146Q8IYE0 955 aa24.94■■□□□ 1.58
RPH3AL-209ENST00000572965 PLSCR1O15162 318 aa24.93■■□□□ 1.58
RPH3AL-209ENST00000572965 RNMTO43148 476 aaKnown RBP24.93■■□□□ 1.58
RPH3AL-209ENST00000572965 NFE2L2Q16236 605 aa24.93■■□□□ 1.58
RPH3AL-209ENST00000572965 PTF1AQ7RTS3 328 aa24.93■■□□□ 1.58
RPH3AL-209ENST00000572965 PNISRQ8TF01 805 aaKnown RBP24.93■■□□□ 1.58
RPH3AL-209ENST00000572965 KDM6AO15550 1401 aaPredicted RBP24.93■■□□□ 1.58
RPH3AL-209ENST00000572965 BTAF1O14981 1849 aa24.92■■□□□ 1.58
RPH3AL-209ENST00000572965 CCER2I3L3R5 266 aa24.92■■□□□ 1.58
RPH3AL-209ENST00000572965 SMARCC1Q92922 1105 aaPredicted RBP24.92■■□□□ 1.58
RPH3AL-209ENST00000572965 TOGARAM1Q9Y4F4 1720 aa24.92■■□□□ 1.58
RPH3AL-209ENST00000572965 HTATSF1O43719 755 aaKnown RBP24.91■■□□□ 1.58
RPH3AL-209ENST00000572965 TEFQ10587 303 aa24.91■■□□□ 1.58
RPH3AL-209ENST00000572965 LMOD3Q0VAK6 560 aa24.9■■□□□ 1.58
RPH3AL-209ENST00000572965 ITGB4P16144 1822 aa24.9■■□□□ 1.58
RPH3AL-209ENST00000572965 PIGBQ92521 554 aa24.89■■□□□ 1.58
RPH3AL-209ENST00000572965 LGR6Q9HBX8 967 aa24.89■■□□□ 1.58
RPH3AL-209ENST00000572965 SCN11AQ9UI33 1791 aa24.89■■□□□ 1.57
RPH3AL-209ENST00000572965 EZH2Q15910 746 aaKnown RBP24.88■■□□□ 1.57
RPH3AL-209ENST00000572965 FAM9BQ8IZU0 186 aa24.88■■□□□ 1.57
RPH3AL-209ENST00000572965 SLC52A2Q9HAB3 445 aa24.88■■□□□ 1.57
RPH3AL-209ENST00000572965 HMGB2P26583 209 aaKnown RBP24.87■■□□□ 1.57
RPH3AL-209ENST00000572965 TMPOP42166 694 aaKnown RBP24.87■■□□□ 1.57
RPH3AL-209ENST00000572965 RIPK4P57078 832 aa24.87■■□□□ 1.57
RPH3AL-209ENST00000572965 NFATC2IPQ8NCF5 419 aa24.87■■□□□ 1.57
RPH3AL-209ENST00000572965 CAMKK2Q96RR4 588 aa24.87■■□□□ 1.57
RPH3AL-209ENST00000572965 RGPD3A6NKT7 1758 aaPredicted RBP24.87■■□□□ 1.57
RPH3AL-209ENST00000572965 RGPD4Q7Z3J3 1758 aa24.87■■□□□ 1.57
RPH3AL-209ENST00000572965 NEUROD2Q15784 382 aa24.85■■□□□ 1.57
RPH3AL-209ENST00000572965 IL17REQ8NFR9 667 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms