RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 IL16Q14005 1332 aa19.9■□□□□ 0.78
RAB40B-206ENST00000571995 TULP4Q9NRJ4 1543 aa19.9■□□□□ 0.78
RAB40B-206ENST00000571995 SETD1BQ9UPS6 1966 aaKnown RBP19.9■□□□□ 0.78
RAB40B-206ENST00000571995 FLIIQ13045 1269 aa19.9■□□□□ 0.78
RAB40B-206ENST00000571995 PHAXQ9H814 394 aaKnown RBP19.9■□□□□ 0.78
RAB40B-206ENST00000571995 BTBD11A6QL63 1104 aa19.89■□□□□ 0.78
RAB40B-206ENST00000571995 MCM4P33991 863 aa19.89■□□□□ 0.78
RAB40B-206ENST00000571995 NAP1L5Q96NT1 182 aaPredicted RBP19.89■□□□□ 0.78
RAB40B-206ENST00000571995 PUS7Q96PZ0 661 aaKnown RBP19.89■□□□□ 0.78
RAB40B-206ENST00000571995 RIC3Q7Z5B4 369 aa19.89■□□□□ 0.77
RAB40B-206ENST00000571995 INO80Q9ULG1 1556 aaPredicted RBP19.89■□□□□ 0.77
RAB40B-206ENST00000571995 INTS3Q68E01 1043 aaKnown RBP19.89■□□□□ 0.77
RAB40B-206ENST00000571995 USP19O94966 1318 aa19.89■□□□□ 0.77
RAB40B-206ENST00000571995 MPNDQ8N594 471 aa19.88■□□□□ 0.77
RAB40B-206ENST00000571995 MCCP23508 829 aa19.87■□□□□ 0.77
RAB40B-206ENST00000571995 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
RAB40B-206ENST00000571995 FAM177BA6PVY3 158 aa19.87■□□□□ 0.77
RAB40B-206ENST00000571995 PTCD1O75127 700 aaKnown RBP19.87■□□□□ 0.77
RAB40B-206ENST00000571995 SIRT2Q8IXJ6 389 aa19.87■□□□□ 0.77
RAB40B-206ENST00000571995 SSFA2P28290 1259 aa19.87■□□□□ 0.77
RAB40B-206ENST00000571995 LGR6Q9HBX8 967 aa19.87■□□□□ 0.77
RAB40B-206ENST00000571995 ST18O60284 1047 aa19.86■□□□□ 0.77
RAB40B-206ENST00000571995 GLI2P10070 1586 aa19.86■□□□□ 0.77
RAB40B-206ENST00000571995 FOSBP53539 338 aa19.86■□□□□ 0.77
RAB40B-206ENST00000571995 CHAMP1Q96JM3 812 aa19.86■□□□□ 0.77
RAB40B-206ENST00000571995 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
RAB40B-206ENST00000571995 TTC5Q8N0Z6 440 aa19.86■□□□□ 0.77
RAB40B-206ENST00000571995 PI4KAP2A4QPH2 592 aa19.85■□□□□ 0.77
RAB40B-206ENST00000571995 SDSP20132 328 aa19.85■□□□□ 0.77
RAB40B-206ENST00000571995 PI4KAP1Q8N8J0 262 aa19.85■□□□□ 0.77
RAB40B-206ENST00000571995 EVA1CP58658 441 aa19.85■□□□□ 0.77
RAB40B-206ENST00000571995 KCNQ3O43525 872 aa19.84■□□□□ 0.77
RAB40B-206ENST00000571995 ANO8Q9HCE9 1232 aaPredicted RBP19.84■□□□□ 0.77
RAB40B-206ENST00000571995 MROH2AA6NES4 1674 aa19.84■□□□□ 0.77
RAB40B-206ENST00000571995 PANK2Q9BZ23 570 aa19.84■□□□□ 0.77
RAB40B-206ENST00000571995 SRCIN1Q9C0H9 1055 aa19.83■□□□□ 0.77
RAB40B-206ENST00000571995 LRRCC1Q9C099 1032 aa19.83■□□□□ 0.77
RAB40B-206ENST00000571995 CD2BP2O95400 341 aaKnown RBP19.82■□□□□ 0.76
RAB40B-206ENST00000571995 IFIT2P09913 472 aaKnown RBP19.82■□□□□ 0.76
RAB40B-206ENST00000571995 CEP85Q6P2H3 762 aa19.82■□□□□ 0.76
RAB40B-206ENST00000571995 CHPF2Q9P2E5 772 aa19.82■□□□□ 0.76
RAB40B-206ENST00000571995 MSH6P52701 1360 aa19.82■□□□□ 0.76
RAB40B-206ENST00000571995 REC8O95072 547 aa19.82■□□□□ 0.76
RAB40B-206ENST00000571995 BMP2KLQ5H9B9 411 aa19.82■□□□□ 0.76
RAB40B-206ENST00000571995 L1TD1Q5T7N2 865 aaKnown RBP19.82■□□□□ 0.76
RAB40B-206ENST00000571995 K7ELQ4 463 aaPredicted RBP19.82■□□□□ 0.76
RAB40B-206ENST00000571995 PLEKHM2Q8IWE5 1019 aa19.82■□□□□ 0.76
RAB40B-206ENST00000571995 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
RAB40B-206ENST00000571995 PLEKHO1Q53GL0 409 aaPredicted RBP19.81■□□□□ 0.76
RAB40B-206ENST00000571995 CWC27Q6UX04 472 aaKnown RBP19.81■□□□□ 0.76
RAB40B-206ENST00000571995 TNPO1Q92973 898 aaKnown RBP19.81■□□□□ 0.76
RAB40B-206ENST00000571995 ARID3AQ99856 593 aa19.81■□□□□ 0.76
RAB40B-206ENST00000571995 DIAPH3Q9NSV4 1193 aa19.81■□□□□ 0.76
RAB40B-206ENST00000571995 TMEM2Q9UHN6 1383 aa19.81■□□□□ 0.76
RAB40B-206ENST00000571995 IQGAP1P46940 1657 aa19.81■□□□□ 0.76
RAB40B-206ENST00000571995 PTMAP06454 111 aaKnown RBP19.81■□□□□ 0.76
RAB40B-206ENST00000571995 RNF214Q8ND24 703 aa19.81■□□□□ 0.76
RAB40B-206ENST00000571995 GNAI3P08754 354 aa19.8■□□□□ 0.76
RAB40B-206ENST00000571995 NEUROD6Q96NK8 337 aa19.8■□□□□ 0.76
RAB40B-206ENST00000571995 PRPF40AO75400 957 aaKnown RBP19.8■□□□□ 0.76
RAB40B-206ENST00000571995 CAVIN1Q6NZI2 390 aaKnown RBP19.8■□□□□ 0.76
RAB40B-206ENST00000571995 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
RAB40B-206ENST00000571995 RPAP2Q8IXW5 612 aaPredicted RBP19.8■□□□□ 0.76
RAB40B-206ENST00000571995 QRICH2Q9H0J4 1663 aa19.8■□□□□ 0.76
RAB40B-206ENST00000571995 PPFIA3O75145 1194 aa19.8■□□□□ 0.76
RAB40B-206ENST00000571995 CCT4P50991 539 aaKnown RBP19.8■□□□□ 0.76
RAB40B-206ENST00000571995 PNMA6EA0A0J9YXQ4 647 aa19.79■□□□□ 0.76
RAB40B-206ENST00000571995 CHL1O00533 1208 aa19.79■□□□□ 0.76
RAB40B-206ENST00000571995 KDM4AO75164 1064 aa19.79■□□□□ 0.76
RAB40B-206ENST00000571995 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
RAB40B-206ENST00000571995 HOXC9P31274 260 aa19.79■□□□□ 0.76
RAB40B-206ENST00000571995 FRMPD1Q5SYB0 1578 aa19.79■□□□□ 0.76
RAB40B-206ENST00000571995 GSPT1P15170 499 aaKnown RBP19.78■□□□□ 0.76
RAB40B-206ENST00000571995 ATP5J2-PTCD1G3V325 749 aa19.78■□□□□ 0.76
RAB40B-206ENST00000571995 GORABQ5T7V8 394 aa19.78■□□□□ 0.76
RAB40B-206ENST00000571995 NBPF6Q5VWK0 638 aa19.78■□□□□ 0.76
RAB40B-206ENST00000571995 ANKRD44Q8N8A2 993 aa19.78■□□□□ 0.76
RAB40B-206ENST00000571995 NBPF4Q96M43 638 aa19.78■□□□□ 0.76
RAB40B-206ENST00000571995 PA2G4Q9UQ80 394 aaKnown RBP19.78■□□□□ 0.76
RAB40B-206ENST00000571995 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 ADGRB1O14514 1584 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 MROH1Q8NDA8 1641 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 DDX11L8A8MPP1 907 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 NEXNQ0ZGT2 675 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 TTC22Q5TAA0 569 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 PPP1R42Q7Z4L9 355 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 CCDC8Q9H0W5 538 aaPredicted RBP19.77■□□□□ 0.76
RAB40B-206ENST00000571995 GDPD2Q9HCC8 539 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 CWF19L2Q2TBE0 894 aaKnown RBP19.77■□□□□ 0.76
RAB40B-206ENST00000571995 SPG7Q9UQ90 795 aa19.77■□□□□ 0.76
RAB40B-206ENST00000571995 G3BP1Q13283 466 aaKnown RBP eCLIP19.77■□□□□ 0.75
RAB40B-206ENST00000571995 TOM1L2Q6ZVM7 507 aa19.77■□□□□ 0.75
RAB40B-206ENST00000571995 A2ML1A8K2U0 1454 aa19.76■□□□□ 0.75
RAB40B-206ENST00000571995 IL17REQ8NFR9 667 aa19.76■□□□□ 0.75
RAB40B-206ENST00000571995 ZGPATQ8N5A5 531 aaKnown RBP19.76■□□□□ 0.75
RAB40B-206ENST00000571995 ANKRD24Q8TF21 1146 aa19.76■□□□□ 0.75
RAB40B-206ENST00000571995 ERC2O15083 957 aa19.76■□□□□ 0.75
RAB40B-206ENST00000571995 MX1P20591 662 aa19.76■□□□□ 0.75
RAB40B-206ENST00000571995 ARHGAP45Q92619 1136 aa19.75■□□□□ 0.75
RAB40B-206ENST00000571995 TAF7LQ5H9L4 462 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms