RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SEMA3EO15041 775 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 HAP1P54257 671 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-219ENST00000569882 NEUROD1Q13562 356 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 TMEM132EQ6IEE7 984 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 TATDN2Q93075 761 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 NALCNQ8IZF0 1738 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 DCCP43146 1447 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 PTCH1Q13635 1447 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 FAM135BQ49AJ0 1406 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 ADGRL3Q9HAR2 1447 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 MYOM2P54296 1465 aa6.92□□□□□ -1.3
CNOT1-219ENST00000569882 SETD1AO15047 1707 aaKnown RBP6.91□□□□□ -1.3
CNOT1-219ENST00000569882 SAFB2Q14151 953 aaKnown RBP eCLIP6.91□□□□□ -1.3
CNOT1-219ENST00000569882 PADI6Q6TGC4 694 aa6.91□□□□□ -1.3
CNOT1-219ENST00000569882 NUDT18Q6ZVK8 323 aa6.91□□□□□ -1.3
CNOT1-219ENST00000569882 PNMA3Q9UL41 463 aa6.91□□□□□ -1.3
CNOT1-219ENST00000569882 PIK3C2GO75747 1445 aa6.91□□□□□ -1.3
CNOT1-219ENST00000569882 NUTM2FA1L443 756 aa6.9□□□□□ -1.3
CNOT1-219ENST00000569882 CFAP70Q5T0N1 1121 aa6.9□□□□□ -1.3
CNOT1-219ENST00000569882 SAMD7Q7Z3H4 446 aa6.9□□□□□ -1.3
CNOT1-219ENST00000569882 LRCH3Q96II8 777 aa6.9□□□□□ -1.3
CNOT1-219ENST00000569882 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-219ENST00000569882 HPS5Q9UPZ3 1129 aa6.9□□□□□ -1.3
CNOT1-219ENST00000569882 YTHDC2Q9H6S0 1430 aaKnown RBP6.9□□□□□ -1.31
CNOT1-219ENST00000569882 KNDC1Q76NI1 1749 aa6.9□□□□□ -1.31
CNOT1-219ENST00000569882 ESCO1Q5FWF5 840 aa6.89□□□□□ -1.31
CNOT1-219ENST00000569882 TTC13Q8NBP0 860 aa6.89□□□□□ -1.31
CNOT1-219ENST00000569882 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
CNOT1-219ENST00000569882 LRPPRCP42704 1394 aaKnown RBP6.89□□□□□ -1.31
CNOT1-219ENST00000569882 ROBO2Q9HCK4 1378 aa6.89□□□□□ -1.31
CNOT1-219ENST00000569882 MED1Q15648 1581 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-219ENST00000569882 ASXL1Q8IXJ9 1541 aa6.88□□□□□ -1.31
CNOT1-219ENST00000569882 TONSLQ96HA7 1378 aa6.88□□□□□ -1.31
CNOT1-219ENST00000569882 JCADQ9P266 1359 aa6.88□□□□□ -1.31
CNOT1-219ENST00000569882 NUTM2BA6NNL0 878 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-219ENST00000569882 NUTM2EB1AL46 878 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-219ENST00000569882 NBPF26B4DH59 902 aa6.88□□□□□ -1.31
CNOT1-219ENST00000569882 NYAP1Q6ZVC0 841 aa6.88□□□□□ -1.31
CNOT1-219ENST00000569882 WAPLQ7Z5K2 1190 aa6.88□□□□□ -1.31
CNOT1-219ENST00000569882 NUTM2AQ8IVF1 878 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-219ENST00000569882 PRAM1Q96QH2 718 aa6.88□□□□□ -1.31
CNOT1-219ENST00000569882 C14orf93Q9H972 538 aaKnown RBP6.88□□□□□ -1.31
CNOT1-219ENST00000569882 TSR3Q9UJK0 312 aaKnown RBP6.88□□□□□ -1.31
CNOT1-219ENST00000569882 MST1RQ04912 1400 aa6.87□□□□□ -1.31
CNOT1-219ENST00000569882 PTGDRQ13258 359 aa6.87□□□□□ -1.31
CNOT1-219ENST00000569882 BRINP3Q76B58 766 aa6.87□□□□□ -1.31
CNOT1-219ENST00000569882 PCGF6Q9BYE7 350 aa6.87□□□□□ -1.31
CNOT1-219ENST00000569882 PRKD2Q9BZL6 878 aa6.87□□□□□ -1.31
CNOT1-219ENST00000569882 RBM27Q9P2N5 1060 aaKnown RBP6.87□□□□□ -1.31
CNOT1-219ENST00000569882 CDC42BPGQ6DT37 1551 aa6.86□□□□□ -1.31
CNOT1-219ENST00000569882 EIF3AQ14152 1382 aaKnown RBP6.86□□□□□ -1.31
CNOT1-219ENST00000569882 ABCC11Q96J66 1382 aa6.86□□□□□ -1.31
CNOT1-219ENST00000569882 MINK1Q8N4C8 1332 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-219ENST00000569882 LMOD2Q6P5Q4 547 aa6.86□□□□□ -1.31
CNOT1-219ENST00000569882 LRRC59Q96AG4 307 aaKnown RBP6.86□□□□□ -1.31
CNOT1-219ENST00000569882 C1orf167Q5SNV9 1468 aa6.85□□□□□ -1.31
CNOT1-219ENST00000569882 NRXN1Q9ULB1 1477 aa6.85□□□□□ -1.31
CNOT1-219ENST00000569882 NPHP3Q7Z494 1330 aa6.85□□□□□ -1.31
CNOT1-219ENST00000569882 FAM161AQ3B820 660 aa6.85□□□□□ -1.31
CNOT1-219ENST00000569882 SIN3AQ96ST3 1273 aa6.85□□□□□ -1.31
CNOT1-219ENST00000569882 HIRIP3Q9BW71 556 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-219ENST00000569882 COL16A1Q07092 1604 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-219ENST00000569882 AHDC1Q5TGY3 1603 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-219ENST00000569882 TECPR2O15040 1411 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 FMN2Q9NZ56 1722 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 KIAA1210Q9ULL0 1709 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 ROCK2O75116 1388 aaKnown RBP6.84□□□□□ -1.31
CNOT1-219ENST00000569882 PLEKHH1Q9ULM0 1364 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 KIF1AQ12756 1690 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 NHSL1Q5SYE7 1610 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 SPATA31A6Q5VVP1 1343 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 FOXO3O43524 673 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 RNF40O75150 1001 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 PPP4CP60510 307 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-219ENST00000569882 PSME1Q06323 249 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 RBM26Q5T8P6 1007 aaKnown RBP6.84□□□□□ -1.31
CNOT1-219ENST00000569882 DDX17Q92841 729 aaKnown RBP6.84□□□□□ -1.31
CNOT1-219ENST00000569882 ORAI2Q96SN7 254 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 EYA1Q99502 592 aa6.84□□□□□ -1.31
CNOT1-219ENST00000569882 PRAG1Q86YV5 1406 aa6.84□□□□□ -1.32
CNOT1-219ENST00000569882 SHPRHQ149N8 1683 aa6.84□□□□□ -1.32
CNOT1-219ENST00000569882 RGPD8O14715 1765 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-219ENST00000569882 DLC1Q96QB1 1528 aa6.83□□□□□ -1.32
CNOT1-219ENST00000569882 TESPA1A2RU30 521 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-219ENST00000569882 SRPK2P78362 688 aaKnown RBP6.83□□□□□ -1.32
CNOT1-219ENST00000569882 NGDNQ8NEJ9 315 aaKnown RBP6.83□□□□□ -1.32
CNOT1-219ENST00000569882 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
CNOT1-219ENST00000569882 SIRT1Q96EB6 747 aa6.83□□□□□ -1.32
CNOT1-219ENST00000569882 PDZRN3Q9UPQ7 1066 aa6.83□□□□□ -1.32
CNOT1-219ENST00000569882 ARHGEF28Q8N1W1 1705 aaKnown RBP6.83□□□□□ -1.32
CNOT1-219ENST00000569882 GPRASP1Q5JY77 1395 aa6.82□□□□□ -1.32
CNOT1-219ENST00000569882 ITSN1Q15811 1721 aa6.82□□□□□ -1.32
CNOT1-219ENST00000569882 ADAMTS2O95450 1211 aa6.82□□□□□ -1.32
CNOT1-219ENST00000569882 SWT1Q5T5J6 900 aaKnown RBP6.82□□□□□ -1.32
CNOT1-219ENST00000569882 CCER1Q8TC90 406 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-219ENST00000569882 C8orf37Q96NL8 207 aa6.82□□□□□ -1.32
CNOT1-219ENST00000569882 ADGRB1O14514 1584 aa6.82□□□□□ -1.32
CNOT1-219ENST00000569882 CENPJQ9HC77 1338 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-219ENST00000569882 ZNF772Q68DY9 489 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 895.5 ms