RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MAP2P11137 1827 aaKnown RBP6.9□□□□□ -1.31
SF3B3-213ENST00000569687 VAMP4O75379 141 aa6.89□□□□□ -1.31
SF3B3-213ENST00000569687 IGHDP01880 384 aa6.89□□□□□ -1.31
SF3B3-213ENST00000569687 HMOX1P09601 288 aa6.89□□□□□ -1.31
SF3B3-213ENST00000569687 RLBP1P12271 317 aa6.89□□□□□ -1.31
SF3B3-213ENST00000569687 CANXP27824 592 aaKnown RBP6.89□□□□□ -1.31
SF3B3-213ENST00000569687 MVPQ14764 893 aaKnown RBP6.89□□□□□ -1.31
SF3B3-213ENST00000569687 ATF7IPQ6VMQ6 1270 aa6.89□□□□□ -1.31
SF3B3-213ENST00000569687 FRAT1Q92837 279 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-213ENST00000569687 TSR2Q969E8 191 aaKnown RBP6.89□□□□□ -1.31
SF3B3-213ENST00000569687 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
SF3B3-213ENST00000569687 ITSN1Q15811 1721 aa6.88□□□□□ -1.31
SF3B3-213ENST00000569687 FMN2Q9NZ56 1722 aa6.88□□□□□ -1.31
SF3B3-213ENST00000569687 SBNO1A3KN83 1393 aa6.88□□□□□ -1.31
SF3B3-213ENST00000569687 HTATSF1O43719 755 aaKnown RBP6.88□□□□□ -1.31
SF3B3-213ENST00000569687 PRR29P0C7W0 189 aa6.88□□□□□ -1.31
SF3B3-213ENST00000569687 MYT1Q01538 1121 aa6.88□□□□□ -1.31
SF3B3-213ENST00000569687 HSP90AB2PQ58FF8 381 aa6.88□□□□□ -1.31
SF3B3-213ENST00000569687 ZC3H15Q8WU90 426 aaKnown RBP6.88□□□□□ -1.31
SF3B3-213ENST00000569687 RWDD1Q9H446 243 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-213ENST00000569687 SMC4Q9NTJ3 1288 aa6.88□□□□□ -1.31
SF3B3-213ENST00000569687 PCDHB15Q9Y5E8 787 aa6.88□□□□□ -1.31
SF3B3-213ENST00000569687 STRCP1A6NGW2 1772 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 NRKQ7Z2Y5 1582 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 LRRC7Q96NW7 1537 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 NCOA3Q9Y6Q9 1424 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 ARHGEF10O15013 1369 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 MAP3K19Q56UN5 1328 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 NUTM2FA1L443 756 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 CHL1O00533 1208 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 TRIM27P14373 513 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-213ENST00000569687 SULT6B1Q6IMI4 303 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 MRPL50Q8N5N7 158 aaKnown RBP6.87□□□□□ -1.31
SF3B3-213ENST00000569687 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
SF3B3-213ENST00000569687 ANP32EQ9BTT0 268 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 CHMP4BQ9H444 224 aaKnown RBP6.87□□□□□ -1.31
SF3B3-213ENST00000569687 NOB1Q9ULX3 412 aaKnown RBP6.87□□□□□ -1.31
SF3B3-213ENST00000569687 DDX19BQ9UMR2 479 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 PHF8Q9UPP1 1060 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 CLEC11AQ9Y240 323 aa6.87□□□□□ -1.31
SF3B3-213ENST00000569687 FLT4P35916 1363 aa6.86□□□□□ -1.31
SF3B3-213ENST00000569687 KDRP35968 1356 aa6.86□□□□□ -1.31
SF3B3-213ENST00000569687 KIF16BQ96L93 1317 aa6.86□□□□□ -1.31
SF3B3-213ENST00000569687 NLRP6P59044 892 aa6.86□□□□□ -1.31
SF3B3-213ENST00000569687 FAM161AQ3B820 660 aa6.86□□□□□ -1.31
SF3B3-213ENST00000569687 PROSER2Q86WR7 435 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-213ENST00000569687 RBM33Q96EV2 1170 aaKnown RBP6.86□□□□□ -1.31
SF3B3-213ENST00000569687 MBIPQ9NS73 344 aa6.86□□□□□ -1.31
SF3B3-213ENST00000569687 ZBTB40Q9NUA8 1239 aa6.86□□□□□ -1.31
SF3B3-213ENST00000569687 DCCP43146 1447 aa6.85□□□□□ -1.31
SF3B3-213ENST00000569687 KIAA0232Q92628 1395 aa6.85□□□□□ -1.31
SF3B3-213ENST00000569687 IGSF1Q8N6C5 1336 aa6.85□□□□□ -1.31
SF3B3-213ENST00000569687 ANP32AP39687 249 aaKnown RBP6.85□□□□□ -1.31
SF3B3-213ENST00000569687 AEBP1Q8IUX7 1158 aa6.85□□□□□ -1.31
SF3B3-213ENST00000569687 FTSJ3Q8IY81 847 aaKnown RBP6.85□□□□□ -1.31
SF3B3-213ENST00000569687 ARHGEF1Q92888 912 aaKnown RBP6.85□□□□□ -1.31
SF3B3-213ENST00000569687 SLC24A3Q9HC58 644 aa6.85□□□□□ -1.31
SF3B3-213ENST00000569687 BABAM1Q9NWV8 329 aa6.85□□□□□ -1.31
SF3B3-213ENST00000569687 TNNQ9UQP3 1299 aa6.85□□□□□ -1.31
SF3B3-213ENST00000569687 TMEM94Q12767 1356 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 ZBTB7BO15156 539 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-213ENST00000569687 AMPHP49418 695 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 TWISTNBQ3B726 338 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-213ENST00000569687 TSPYL6Q8N831 410 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 ABTB2Q8N961 1025 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 C8orf58Q8NAV2 365 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 IP6K1Q92551 441 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 EYA1Q99502 592 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 THUMPD2Q9BTF0 503 aaKnown RBP6.84□□□□□ -1.31
SF3B3-213ENST00000569687 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 C19orf44Q9H6X5 657 aa6.84□□□□□ -1.31
SF3B3-213ENST00000569687 ZNF335Q9H4Z2 1342 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-213ENST00000569687 RGPD8O14715 1765 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-213ENST00000569687 HOXC9P31274 260 aa6.83□□□□□ -1.32
SF3B3-213ENST00000569687 MTHFSDQ2M296 383 aaKnown RBP6.83□□□□□ -1.32
SF3B3-213ENST00000569687 C8orf34Q49A92 452 aa6.83□□□□□ -1.32
SF3B3-213ENST00000569687 SMC5Q8IY18 1101 aa6.83□□□□□ -1.32
SF3B3-213ENST00000569687 TMEM57Q8N5G2 664 aa6.83□□□□□ -1.32
SF3B3-213ENST00000569687 KCNH5Q8NCM2 988 aa6.83□□□□□ -1.32
SF3B3-213ENST00000569687 API5Q9BZZ5 524 aaKnown RBP6.83□□□□□ -1.32
SF3B3-213ENST00000569687 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
SF3B3-213ENST00000569687 RGPD1P0DJD0 1748 aa6.83□□□□□ -1.32
SF3B3-213ENST00000569687 USP54Q70EL1 1684 aa6.83□□□□□ -1.32
SF3B3-213ENST00000569687 CRB1P82279 1406 aa6.83□□□□□ -1.32
SF3B3-213ENST00000569687 RTL1A6NKG5 1358 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 SOS1Q07889 1333 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-213ENST00000569687 PEAK1Q9H792 1746 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 C1orf167Q5SNV9 1468 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 FAM83GA6ND36 823 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 SEMA3EO15041 775 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 PSME1Q06323 249 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 INTS3Q68E01 1043 aaKnown RBP6.82□□□□□ -1.32
SF3B3-213ENST00000569687 SKAP1Q86WV1 359 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 PDZRN3Q9UPQ7 1066 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 XIRP1Q702N8 1843 aaKnown RBP6.82□□□□□ -1.32
SF3B3-213ENST00000569687 MST1RQ04912 1400 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 MSH6P52701 1360 aa6.82□□□□□ -1.32
SF3B3-213ENST00000569687 ABCC4O15439 1325 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms