RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
SMG1-216ENST00000569122 DNAJC5GQ8N7S2 189 aa12.37□□□□□ -0.43
SMG1-216ENST00000569122 NME9Q86XW9 330 aa12.36□□□□□ -0.43
SMG1-216ENST00000569122 TERF2IPQ9NYB0 399 aa12.36□□□□□ -0.43
SMG1-216ENST00000569122 BTAF1O14981 1849 aa12.36□□□□□ -0.43
SMG1-216ENST00000569122 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
SMG1-216ENST00000569122 IGSF1Q8N6C5 1336 aa12.36□□□□□ -0.43
SMG1-216ENST00000569122 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
SMG1-216ENST00000569122 C16orf71Q8IYS4 520 aaPredicted RBP12.35□□□□□ -0.43
SMG1-216ENST00000569122 TMC1Q8TDI8 760 aa12.35□□□□□ -0.43
SMG1-216ENST00000569122 SMARCC1Q92922 1105 aaPredicted RBP12.35□□□□□ -0.43
SMG1-216ENST00000569122 LTV1Q96GA3 475 aaPredicted RBP12.35□□□□□ -0.43
SMG1-216ENST00000569122 AK7Q96M32 723 aa12.35□□□□□ -0.43
SMG1-216ENST00000569122 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
SMG1-216ENST00000569122 NSD2O96028 1365 aa12.33□□□□□ -0.44
SMG1-216ENST00000569122 AMPHP49418 695 aa12.33□□□□□ -0.44
SMG1-216ENST00000569122 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
SMG1-216ENST00000569122 RAPGEF4Q8WZA2 1011 aa12.33□□□□□ -0.44
SMG1-216ENST00000569122 ROCK2O75116 1388 aaKnown RBP12.32□□□□□ -0.44
SMG1-216ENST00000569122 FSTL1Q12841 308 aa12.32□□□□□ -0.44
SMG1-216ENST00000569122 KLRG1Q96E93 195 aa12.32□□□□□ -0.44
SMG1-216ENST00000569122 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
SMG1-216ENST00000569122 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
SMG1-216ENST00000569122 SSFA2P28290 1259 aa12.31□□□□□ -0.44
SMG1-216ENST00000569122 PRELPP51888 382 aa12.31□□□□□ -0.44
SMG1-216ENST00000569122 TGFB2P61812 414 aa12.31□□□□□ -0.44
SMG1-216ENST00000569122 TNS4Q8IZW8 715 aa12.31□□□□□ -0.44
SMG1-216ENST00000569122 JMYQ8N9B5 988 aa12.31□□□□□ -0.44
SMG1-216ENST00000569122 COG3Q96JB2 828 aa12.31□□□□□ -0.44
SMG1-216ENST00000569122 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
SMG1-216ENST00000569122 TATP17735 454 aaPredicted RBP12.3□□□□□ -0.44
SMG1-216ENST00000569122 HOXC9P31274 260 aa12.3□□□□□ -0.44
SMG1-216ENST00000569122 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
SMG1-216ENST00000569122 RGPD5Q99666 1765 aa12.3□□□□□ -0.44
SMG1-216ENST00000569122 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
SMG1-216ENST00000569122 KAT6BQ8WYB5 2073 aa12.3□□□□□ -0.44
SMG1-216ENST00000569122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.29□□□□□ -0.44
SMG1-216ENST00000569122 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
SMG1-216ENST00000569122 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
SMG1-216ENST00000569122 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
SMG1-216ENST00000569122 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
SMG1-216ENST00000569122 PHF14O94880 888 aa12.28□□□□□ -0.44
SMG1-216ENST00000569122 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
SMG1-216ENST00000569122 SLC12A5Q9H2X9 1139 aa12.28□□□□□ -0.44
SMG1-216ENST00000569122 CAPN15O75808 1086 aa12.27□□□□□ -0.45
SMG1-216ENST00000569122 ARHGAP27Q6ZUM4 889 aa12.27□□□□□ -0.45
SMG1-216ENST00000569122 WWC3Q9ULE0 1092 aa12.27□□□□□ -0.45
SMG1-216ENST00000569122 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
SMG1-216ENST00000569122 MAP3K19Q56UN5 1328 aa12.27□□□□□ -0.45
SMG1-216ENST00000569122 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
SMG1-216ENST00000569122 NLGN1Q8N2Q7 840 aa12.26□□□□□ -0.45
SMG1-216ENST00000569122 SMG6Q86US8 1419 aaKnown RBP12.26□□□□□ -0.45
SMG1-216ENST00000569122 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
SMG1-216ENST00000569122 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
SMG1-216ENST00000569122 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
SMG1-216ENST00000569122 RTL1A6NKG5 1358 aa12.25□□□□□ -0.45
SMG1-216ENST00000569122 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
SMG1-216ENST00000569122 LY75O60449 1722 aa12.24□□□□□ -0.45
SMG1-216ENST00000569122 MMP10P09238 476 aa12.24□□□□□ -0.45
SMG1-216ENST00000569122 CCDC87Q9NVE4 849 aa12.24□□□□□ -0.45
SMG1-216ENST00000569122 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
SMG1-216ENST00000569122 LOC102724428A0A0B4J2F2 783 aa12.23□□□□□ -0.45
SMG1-216ENST00000569122 FCHSD2O94868 740 aa12.23□□□□□ -0.45
SMG1-216ENST00000569122 SIK1P57059 783 aa12.23□□□□□ -0.45
SMG1-216ENST00000569122 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 MEGF6O75095 1541 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 GNPATO15228 680 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 TMF1P82094 1093 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 TRAPPC3LQ5T215 181 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 C9orf131Q5VYM1 1079 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 POTEDQ86YR6 584 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 CARD11Q9BXL7 1154 aa12.22□□□□□ -0.45
SMG1-216ENST00000569122 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
SMG1-216ENST00000569122 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
SMG1-216ENST00000569122 ADRA2BP18089 450 aa12.21□□□□□ -0.45
SMG1-216ENST00000569122 PIGBQ92521 554 aa12.21□□□□□ -0.45
SMG1-216ENST00000569122 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
SMG1-216ENST00000569122 RTCBQ9Y3I0 505 aaKnown RBP12.21□□□□□ -0.45
SMG1-216ENST00000569122 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.46
SMG1-216ENST00000569122 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
SMG1-216ENST00000569122 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
SMG1-216ENST00000569122 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
SMG1-216ENST00000569122 USHBP1Q8N6Y0 703 aa12.2□□□□□ -0.46
SMG1-216ENST00000569122 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
SMG1-216ENST00000569122 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
SMG1-216ENST00000569122 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
SMG1-216ENST00000569122 DOT1LQ8TEK3 1739 aa12.2□□□□□ -0.46
SMG1-216ENST00000569122 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
SMG1-216ENST00000569122 CYP27B1O15528 508 aa12.19□□□□□ -0.46
SMG1-216ENST00000569122 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
SMG1-216ENST00000569122 LINC00116Q8NCU8 138 aa12.19□□□□□ -0.46
SMG1-216ENST00000569122 LTN1O94822 1766 aa12.19□□□□□ -0.46
SMG1-216ENST00000569122 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
SMG1-216ENST00000569122 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
SMG1-216ENST00000569122 DPEP1P16444 411 aa12.18□□□□□ -0.46
SMG1-216ENST00000569122 HTRA3P83110 453 aa12.18□□□□□ -0.46
SMG1-216ENST00000569122 RRS1Q15050 365 aaKnown RBP12.18□□□□□ -0.46
SMG1-216ENST00000569122 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms