RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 EMILIN1Q9Y6C2 1016 aa12.29□□□□□ -0.44
CNOT1-214ENST00000568917 MAPK8IP3Q9UPT6 1336 aa12.29□□□□□ -0.44
CNOT1-214ENST00000568917 RTL1A6NKG5 1358 aa12.29□□□□□ -0.44
CNOT1-214ENST00000568917 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
CNOT1-214ENST00000568917 PSME1Q06323 249 aa12.28□□□□□ -0.44
CNOT1-214ENST00000568917 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
CNOT1-214ENST00000568917 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
CNOT1-214ENST00000568917 PEAK1Q9H792 1746 aa12.28□□□□□ -0.44
CNOT1-214ENST00000568917 STK25O00506 426 aa12.27□□□□□ -0.45
CNOT1-214ENST00000568917 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
CNOT1-214ENST00000568917 NLRP6P59044 892 aa12.27□□□□□ -0.45
CNOT1-214ENST00000568917 RRS1Q15050 365 aaKnown RBP12.27□□□□□ -0.45
CNOT1-214ENST00000568917 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
CNOT1-214ENST00000568917 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
CNOT1-214ENST00000568917 KCNH5Q8NCM2 988 aa12.27□□□□□ -0.45
CNOT1-214ENST00000568917 RSPH6AQ9H0K4 717 aa12.27□□□□□ -0.45
CNOT1-214ENST00000568917 RCAN3Q9UKA8 241 aa12.27□□□□□ -0.45
CNOT1-214ENST00000568917 SALL2Q9Y467 1007 aaPredicted RBP12.27□□□□□ -0.45
CNOT1-214ENST00000568917 SLIT3O75094 1523 aa12.26□□□□□ -0.45
CNOT1-214ENST00000568917 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
CNOT1-214ENST00000568917 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
CNOT1-214ENST00000568917 ALS2Q96Q42 1657 aa12.25□□□□□ -0.45
CNOT1-214ENST00000568917 NFAT5O94916 1531 aa12.25□□□□□ -0.45
CNOT1-214ENST00000568917 ARHGEF10O15013 1369 aa12.25□□□□□ -0.45
CNOT1-214ENST00000568917 IL16Q14005 1332 aa12.25□□□□□ -0.45
CNOT1-214ENST00000568917 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
CNOT1-214ENST00000568917 PLCG2P16885 1265 aa12.25□□□□□ -0.45
CNOT1-214ENST00000568917 TMPOP42166 694 aaKnown RBP12.25□□□□□ -0.45
CNOT1-214ENST00000568917 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
CNOT1-214ENST00000568917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.459e-12■■□□□ 13.1
CNOT1-214ENST00000568917 LTN1O94822 1766 aa12.23□□□□□ -0.45
CNOT1-214ENST00000568917 USP19O94966 1318 aa12.23□□□□□ -0.45
CNOT1-214ENST00000568917 NPHP3Q7Z494 1330 aa12.23□□□□□ -0.45
CNOT1-214ENST00000568917 LMOD3Q0VAK6 560 aa12.23□□□□□ -0.45
CNOT1-214ENST00000568917 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
CNOT1-214ENST00000568917 ORAI2Q96SN7 254 aa12.23□□□□□ -0.45
CNOT1-214ENST00000568917 KDRP35968 1356 aa12.22□□□□□ -0.45
CNOT1-214ENST00000568917 CT47B1P0C2W7 299 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-214ENST00000568917 FBLN1P23142 703 aa12.22□□□□□ -0.45
CNOT1-214ENST00000568917 PRKAR2BP31323 418 aa12.22□□□□□ -0.45
CNOT1-214ENST00000568917 CALD1Q05682 793 aaKnown RBP12.22□□□□□ -0.45
CNOT1-214ENST00000568917 MYH16Q9H6N6 1097 aa12.22□□□□□ -0.45
CNOT1-214ENST00000568917 ABCC6O95255 1503 aa12.21□□□□□ -0.45
CNOT1-214ENST00000568917 FOXO3O43524 673 aa12.21□□□□□ -0.45
CNOT1-214ENST00000568917 AMPHP49418 695 aa12.21□□□□□ -0.45
CNOT1-214ENST00000568917 NFE2L2Q16236 605 aa12.21□□□□□ -0.45
CNOT1-214ENST00000568917 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.45
CNOT1-214ENST00000568917 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
CNOT1-214ENST00000568917 SENP3-EIF4A1A0A087X0R7 540 aa12.2□□□□□ -0.46
CNOT1-214ENST00000568917 HOXC9P31274 260 aa12.2□□□□□ -0.46
CNOT1-214ENST00000568917 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
CNOT1-214ENST00000568917 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
CNOT1-214ENST00000568917 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-214ENST00000568917 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
CNOT1-214ENST00000568917 RIPK4P57078 832 aa12.19□□□□□ -0.46
CNOT1-214ENST00000568917 HSP90AB2PQ58FF8 381 aa12.19□□□□□ -0.46
CNOT1-214ENST00000568917 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-214ENST00000568917 IP6K1Q92551 441 aa12.19□□□□□ -0.46
CNOT1-214ENST00000568917 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
CNOT1-214ENST00000568917 PXDNQ92626 1479 aa12.19□□□□□ -0.46
CNOT1-214ENST00000568917 ZNF335Q9H4Z2 1342 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-214ENST00000568917 TNS3Q68CZ2 1445 aa12.18□□□□□ -0.46
CNOT1-214ENST00000568917 SOX12O15370 315 aa12.18□□□□□ -0.46
CNOT1-214ENST00000568917 NEUROD2Q15784 382 aa12.18□□□□□ -0.46
CNOT1-214ENST00000568917 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
CNOT1-214ENST00000568917 PPP4R2Q9NY27 417 aa12.18□□□□□ -0.46
CNOT1-214ENST00000568917 HMOX1P09601 288 aa12.17□□□□□ -0.46
CNOT1-214ENST00000568917 RRP7AQ9Y3A4 280 aaKnown RBP12.17□□□□□ -0.46
CNOT1-214ENST00000568917 GCP02774 474 aa12.16□□□□□ -0.46
CNOT1-214ENST00000568917 SULT6B1Q6IMI4 303 aa12.16□□□□□ -0.46
CNOT1-214ENST00000568917 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
CNOT1-214ENST00000568917 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
CNOT1-214ENST00000568917 CRYBG1Q9Y4K1 1723 aa12.16□□□□□ -0.46
CNOT1-214ENST00000568917 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
CNOT1-214ENST00000568917 ZNF428Q96B54 188 aa12.15□□□□□ -0.46
CNOT1-214ENST00000568917 MFRPQ9BY79 579 aa12.15□□□□□ -0.46
CNOT1-214ENST00000568917 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
CNOT1-214ENST00000568917 CAMTA1Q9Y6Y1 1673 aa12.15□□□□□ -0.46
CNOT1-214ENST00000568917 SPATA31A3Q5VYP0 1347 aa12.15□□□□□ -0.46
CNOT1-214ENST00000568917 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.46
CNOT1-214ENST00000568917 NUTM2GQ5VZR2 741 aa12.14□□□□□ -0.47
CNOT1-214ENST00000568917 BRINP3Q76B58 766 aa12.14□□□□□ -0.47
CNOT1-214ENST00000568917 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
CNOT1-214ENST00000568917 EYA1Q99502 592 aa12.14□□□□□ -0.47
CNOT1-214ENST00000568917 SLAIN2Q9P270 581 aa12.14□□□□□ -0.47
CNOT1-214ENST00000568917 SOS2Q07890 1332 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-214ENST00000568917 FAM208AQ9UK61 1670 aaKnown RBP12.14□□□□□ -0.47
CNOT1-214ENST00000568917 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
CNOT1-214ENST00000568917 GNAI1P63096 354 aa12.13□□□□□ -0.47
CNOT1-214ENST00000568917 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
CNOT1-214ENST00000568917 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
CNOT1-214ENST00000568917 IFT57Q9NWB7 429 aa12.13□□□□□ -0.47
CNOT1-214ENST00000568917 FANCIQ9NVI1 1328 aa12.13□□□□□ -0.47
CNOT1-214ENST00000568917 CPDO75976 1380 aa12.12□□□□□ -0.47
CNOT1-214ENST00000568917 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
CNOT1-214ENST00000568917 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
CNOT1-214ENST00000568917 LTBP4Q8N2S1 1624 aa12.11□□□□□ -0.47
CNOT1-214ENST00000568917 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-214ENST00000568917 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-214ENST00000568917 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms