RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 MARVELD3Q96A59 401 aa14.61□□□□□ -0.07
LINC00564-201ENST00000567258 TTC21BQ7Z4L5 1316 aa14.61□□□□□ -0.07
LINC00564-201ENST00000567258 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
LINC00564-201ENST00000567258 MKRN3Q13064 507 aaKnown RBP14.6□□□□□ -0.07
LINC00564-201ENST00000567258 LARP1Q6PKG0 1096 aaKnown RBP14.6□□□□□ -0.07
LINC00564-201ENST00000567258 BARGINQ6ZT62 677 aa14.6□□□□□ -0.07
LINC00564-201ENST00000567258 DEFB132Q7Z7B7 95 aa14.6□□□□□ -0.07
LINC00564-201ENST00000567258 THRAP3Q9Y2W1 955 aaKnown RBP14.6□□□□□ -0.07
LINC00564-201ENST00000567258 MON2Q7Z3U7 1717 aa14.6□□□□□ -0.07
LINC00564-201ENST00000567258 RGPD5Q99666 1765 aa14.6□□□□□ -0.07
LINC00564-201ENST00000567258 SOX12O15370 315 aa14.59□□□□□ -0.07
LINC00564-201ENST00000567258 FAM182BQ5T319 152 aa14.59□□□□□ -0.07
LINC00564-201ENST00000567258 FAM196AQ6ZSG2 479 aa14.59□□□□□ -0.07
LINC00564-201ENST00000567258 SLIT3O75094 1523 aa14.59□□□□□ -0.07
LINC00564-201ENST00000567258 C3orf67Q6ZVT6 689 aa14.58□□□□□ -0.08
LINC00564-201ENST00000567258 TERF2IPQ9NYB0 399 aa14.58□□□□□ -0.08
LINC00564-201ENST00000567258 AATKQ6ZMQ8 1374 aa14.58□□□□□ -0.08
LINC00564-201ENST00000567258 TOM1L2Q6ZVM7 507 aa14.57□□□□□ -0.08
LINC00564-201ENST00000567258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC00564-201ENST00000567258 CRB1P82279 1406 aa14.57□□□□□ -0.08
LINC00564-201ENST00000567258 CPSF1Q10570 1443 aaKnown RBP14.57□□□□□ -0.08
LINC00564-201ENST00000567258 COL5A2P05997 1499 aaPredicted RBP14.57□□□□□ -0.08
LINC00564-201ENST00000567258 CSB-PGBD3P0DP91 1061 aa14.56□□□□□ -0.08
LINC00564-201ENST00000567258 PARP4Q9UKK3 1724 aaKnown RBP14.55□□□□□ -0.08
LINC00564-201ENST00000567258 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
LINC00564-201ENST00000567258 SPNS2Q8IVW8 549 aa14.55□□□□□ -0.08
LINC00564-201ENST00000567258 L3MBTL3Q96JM7 780 aaPredicted RBP14.55□□□□□ -0.08
LINC00564-201ENST00000567258 PUS7Q96PZ0 661 aaKnown RBP14.55□□□□□ -0.08
LINC00564-201ENST00000567258 COL18A1P39060 1754 aa14.55□□□□□ -0.08
LINC00564-201ENST00000567258 TRIM37O94972 964 aa14.54□□□□□ -0.08
LINC00564-201ENST00000567258 CHRM1P11229 460 aaPredicted RBP14.54□□□□□ -0.08
LINC00564-201ENST00000567258 PSEN1P49768 467 aa14.54□□□□□ -0.08
LINC00564-201ENST00000567258 MMRN1Q13201 1228 aa14.54□□□□□ -0.08
LINC00564-201ENST00000567258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC00564-201ENST00000567258 TNS1Q9HBL0 1735 aaKnown RBP14.54□□□□□ -0.08
LINC00564-201ENST00000567258 LTN1O94822 1766 aa14.54□□□□□ -0.08
LINC00564-201ENST00000567258 ST20-MTHFSA0A0A6YYL1 179 aa14.53□□□□□ -0.08
LINC00564-201ENST00000567258 EN1Q05925 392 aaPredicted RBP14.53□□□□□ -0.08
LINC00564-201ENST00000567258 ARHGEF25Q86VW2 580 aa14.53□□□□□ -0.08
LINC00564-201ENST00000567258 PCGF6Q9BYE7 350 aa14.53□□□□□ -0.08
LINC00564-201ENST00000567258 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
LINC00564-201ENST00000567258 WNK3Q9BYP7 1800 aa14.52□□□□□ -0.08
LINC00564-201ENST00000567258 EDC4Q6P2E9 1401 aaKnown RBP14.52□□□□□ -0.08
LINC00564-201ENST00000567258 NINLQ9Y2I6 1382 aa14.52□□□□□ -0.08
LINC00564-201ENST00000567258 WDR17Q8IZU2 1322 aa14.52□□□□□ -0.08
LINC00564-201ENST00000567258 APBA3O96018 575 aa14.52□□□□□ -0.09
LINC00564-201ENST00000567258 DDB1Q16531 1140 aa14.52□□□□□ -0.09
LINC00564-201ENST00000567258 CDCA7Q9BWT1 371 aaPredicted RBP14.52□□□□□ -0.09
LINC00564-201ENST00000567258 KAT6BQ8WYB5 2073 aa14.52□□□□□ -0.09
LINC00564-201ENST00000567258 USP54Q70EL1 1684 aa14.51□□□□□ -0.09
LINC00564-201ENST00000567258 TMF1P82094 1093 aa14.5□□□□□ -0.09
LINC00564-201ENST00000567258 NME9Q86XW9 330 aa14.5□□□□□ -0.09
LINC00564-201ENST00000567258 AXIN2Q9Y2T1 843 aa14.5□□□□□ -0.09
LINC00564-201ENST00000567258 ABCC6O95255 1503 aa14.5□□□□□ -0.09
LINC00564-201ENST00000567258 USP31Q70CQ4 1352 aa14.49□□□□□ -0.09
LINC00564-201ENST00000567258 CDCA8Q53HL2 280 aa14.49□□□□□ -0.09
LINC00564-201ENST00000567258 TIMELESSQ9UNS1 1208 aa14.49□□□□□ -0.09
LINC00564-201ENST00000567258 SBF2Q86WG5 1849 aa14.49□□□□□ -0.09
LINC00564-201ENST00000567258 NFAT5O94916 1531 aa14.49□□□□□ -0.09
LINC00564-201ENST00000567258 CD163L1Q9NR16 1453 aa14.49□□□□□ -0.09
LINC00564-201ENST00000567258 DISP2A7MBM2 1401 aa14.49□□□□□ -0.09
LINC00564-201ENST00000567258 A0A1W2PP64 1363 aa14.48□□□□□ -0.09
LINC00564-201ENST00000567258 CLSPNQ9HAW4 1339 aa14.48□□□□□ -0.09
LINC00564-201ENST00000567258 CARD10Q9BWT7 1032 aa14.48□□□□□ -0.09
LINC00564-201ENST00000567258 OVOS2A0A0G2JMS6 1433 aa14.48□□□□□ -0.09
LINC00564-201ENST00000567258 OVOS2A0A0J9YW53 1432 aa14.48□□□□□ -0.09
LINC00564-201ENST00000567258 OVOS2Q6IE36 1432 aa14.48□□□□□ -0.09
LINC00564-201ENST00000567258 LRRC37A3O60309 1634 aa14.48□□□□□ -0.09
LINC00564-201ENST00000567258 PARD3Q8TEW0 1356 aa14.47□□□□□ -0.09
LINC00564-201ENST00000567258 USP47Q96K76 1375 aa14.47□□□□□ -0.09
LINC00564-201ENST00000567258 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
LINC00564-201ENST00000567258 EZH2Q15910 746 aaKnown RBP14.47□□□□□ -0.09
LINC00564-201ENST00000567258 TESK2Q96S53 571 aa14.47□□□□□ -0.09
LINC00564-201ENST00000567258 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
LINC00564-201ENST00000567258 SRCAPQ6ZRS2 3230 aa14.46□□□□□ -0.09
LINC00564-201ENST00000567258 EXOC5O00471 708 aa14.46□□□□□ -0.09
LINC00564-201ENST00000567258 EMP3P54852 163 aa14.46□□□□□ -0.09
LINC00564-201ENST00000567258 NBPF14Q5TI25 921 aa14.46□□□□□ -0.09
LINC00564-201ENST00000567258 COG3Q96JB2 828 aa14.46□□□□□ -0.09
LINC00564-201ENST00000567258 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.09
LINC00564-201ENST00000567258 CAMKK2Q96RR4 588 aa14.44□□□□□ -0.1
LINC00564-201ENST00000567258 RREB1Q92766 1687 aa14.43□□□□□ -0.1
LINC00564-201ENST00000567258 FAM208AQ9UK61 1670 aaKnown RBP14.43□□□□□ -0.1
LINC00564-201ENST00000567258 PDAP1Q13442 181 aaKnown RBP14.43□□□□□ -0.1
LINC00564-201ENST00000567258 R3HDM1Q15032 1099 aaKnown RBP14.43□□□□□ -0.1
LINC00564-201ENST00000567258 ANKRD36BQ8N2N9 1353 aa14.43□□□□□ -0.1
LINC00564-201ENST00000567258 LRP5O75197 1615 aa14.42□□□□□ -0.1
LINC00564-201ENST00000567258 PEAK1Q9H792 1746 aa14.42□□□□□ -0.1
LINC00564-201ENST00000567258 AMPHP49418 695 aa14.42□□□□□ -0.1
LINC00564-201ENST00000567258 ANKRD24Q8TF21 1146 aa14.42□□□□□ -0.1
LINC00564-201ENST00000567258 KIF20BQ96Q89 1820 aa14.42□□□□□ -0.1
LINC00564-201ENST00000567258 ERBB3P21860 1342 aa14.41□□□□□ -0.1
LINC00564-201ENST00000567258 NUP188Q5SRE5 1749 aa14.41□□□□□ -0.1
LINC00564-201ENST00000567258 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
LINC00564-201ENST00000567258 CCER1Q8TC90 406 aaPredicted RBP14.41□□□□□ -0.1
LINC00564-201ENST00000567258 RGPD3A6NKT7 1758 aaPredicted RBP14.41□□□□□ -0.1
LINC00564-201ENST00000567258 RGPD4Q7Z3J3 1758 aa14.41□□□□□ -0.1
LINC00564-201ENST00000567258 IL2RBP14784 551 aa14.4□□□□□ -0.1
LINC00564-201ENST00000567258 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.1
LINC00564-201ENST00000567258 MARCH10Q8NA82 808 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms